메뉴 건너뛰기




Volumn 17, Issue 2, 2005, Pages 223-229

Cellular oscillators: Rhythmic gene expression and metabolism

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL RHYTHM; CELL DIVISION; CELL METABOLISM; CIRCADIAN RHYTHM; CLASSIFICATION; CYANOBACTERIUM; DNA SYNTHESIS; FLUORESCENCE; GENE EXPRESSION; HUMAN; KINETICS; NONHUMAN; OSCILLATION; PERIODICITY; PRIORITY JOURNAL; REVIEW; ULTRADIAN RHYTHM; YEAST;

EID: 15044341917     PISSN: 09550674     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ceb.2005.01.007     Document Type: Review
Times cited : (113)

References (49)
  • 1
    • 0017325257 scopus 로고
    • Sleep in the rat during food deprivation and subsequent restitution of food
    • A.A. Borbely Sleep in the rat during food deprivation and subsequent restitution of food Brain Res 124 1977 457 471
    • (1977) Brain Res , vol.124 , pp. 457-471
    • Borbely, A.A.1
  • 3
    • 0842342616 scopus 로고    scopus 로고
    • A genome-wide oscillation in transcription gates DNA replication and cell cycle
    • R.R. Klevecz, J. Bolen, G. Forrest, and D.B. Murray A genome-wide oscillation in transcription gates DNA replication and cell cycle. Proc Natl Acad Sci USA 101 2004 1200 1205 Using oligonucleotide microarray hybridization, the authors show that virtually all yeast transcripts accumulate in an oscillatory fashion. The large majority of genes are expressed at peak level during the reductive phase of the 40 min respiratory oscillation. Moreover, the yeast respiratory clock gates DNA synthesis (S-phase) to a narrow time window during the reductive phase.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 1200-1205
    • Klevecz, R.R.1    Bolen, J.2    Forrest, G.3    Murray, D.B.4
  • 4
    • 0038115065 scopus 로고    scopus 로고
    • The segmentation clock: Converting embryonic time into spatial pattern
    • O. Pourquie The segmentation clock: converting embryonic time into spatial pattern Science 301 2003 328 330
    • (2003) Science , vol.301 , pp. 328-330
    • Pourquie, O.1
  • 5
    • 0026164333 scopus 로고
    • Ongoing ultradian activity rhythms in the common vole, Microtus arvalis, during deprivations of food, water and rest
    • M.P. Gerkema, and F. van der Leest Ongoing ultradian activity rhythms in the common vole, Microtus arvalis, during deprivations of food, water and rest J Comp Physiol [A] 168 1991 591 597
    • (1991) J Comp Physiol [A] , vol.168 , pp. 591-597
    • Gerkema, M.P.1    Van Der Leest, F.2
  • 6
    • 0344609285 scopus 로고    scopus 로고
    • Circannual reproductive rhythm in the European hamster (Cricetus cricetus): Demonstration of the existence of an annual phase of sensitivity to short photoperiod
    • M. Saboureau, M. Masson-Pevet, B. Canguilhem, and P. Pevet Circannual reproductive rhythm in the European hamster (Cricetus cricetus): demonstration of the existence of an annual phase of sensitivity to short photoperiod J Pineal Res 26 1999 9 16
    • (1999) J Pineal Res , vol.26 , pp. 9-16
    • Saboureau, M.1    Masson-Pevet, M.2    Canguilhem, B.3    Pevet, P.4
  • 7
    • 0017193767 scopus 로고
    • Synchronization of periodical cicada emergences
    • F.C. Hoppensteadt, and J.B. Keller Synchronization of periodical cicada emergences Science 194 1976 335 337
    • (1976) Science , vol.194 , pp. 335-337
    • Hoppensteadt, F.C.1    Keller, J.B.2
  • 8
    • 0025021084 scopus 로고
    • Transplanted suprachiasmatic nucleus determines circadian period
    • M.R. Ralph, R.G. Foster, F.C. Davis, and M. Menaker Transplanted suprachiasmatic nucleus determines circadian period Science 247 1990 975 978
    • (1990) Science , vol.247 , pp. 975-978
    • Ralph, M.R.1    Foster, R.G.2    Davis, F.C.3    Menaker, M.4
  • 9
    • 0029781519 scopus 로고    scopus 로고
    • A diffusible coupling signal from the transplanted suprachiasmatic nucleus controlling circadian locomotor rhythms
    • R. Silver, J. LeSauter, P.A. Tresco, and M.N. Lehman A diffusible coupling signal from the transplanted suprachiasmatic nucleus controlling circadian locomotor rhythms Nature 382 1996 810 813
    • (1996) Nature , vol.382 , pp. 810-813
    • Silver, R.1    Lesauter, J.2    Tresco, P.A.3    Lehman, M.N.4
  • 10
    • 0033593306 scopus 로고    scopus 로고
    • Molecular bases for circadian clocks
    • J.C. Dunlap Molecular bases for circadian clocks Cell 96 1999 271 290
    • (1999) Cell , vol.96 , pp. 271-290
    • Dunlap, J.C.1
  • 11
    • 0033534628 scopus 로고    scopus 로고
    • A molecular mechanism regulating rhythmic output from the suprachiasmatic circadian clock
    • X. Jin, L.P. Shearman, D.R. Weaver, M.J. Zylka, G.J. de Vries, and S.M. Reppert A molecular mechanism regulating rhythmic output from the suprachiasmatic circadian clock Cell 96 1999 57 68
    • (1999) Cell , vol.96 , pp. 57-68
    • Jin, X.1    Shearman, L.P.2    Weaver, D.R.3    Zylka, M.J.4    De Vries, G.J.5    Reppert, S.M.6
  • 12
    • 0028904194 scopus 로고
    • Individual neurons dissociated from rat suprachiasmatic nucleus express independently phased circadian firing rhythms
    • D.K. Welsh, D.E. Logothetis, M. Meister, and S.M. Reppert Individual neurons dissociated from rat suprachiasmatic nucleus express independently phased circadian firing rhythms Neuron 14 1995 697 706
    • (1995) Neuron , vol.14 , pp. 697-706
    • Welsh, D.K.1    Logothetis, D.E.2    Meister, M.3    Reppert, S.M.4
  • 13
    • 0345306748 scopus 로고    scopus 로고
    • Synchronization of cellular clocks in the suprachiasmatic nucleus
    • S. Yamaguchi, H. Isejima, T. Matsuo, R. Okura, K. Yagita, M. Kobayashi, and H. Okamura Synchronization of cellular clocks in the suprachiasmatic nucleus Science 302 2003 1408 1412 The authors performed single-cell luminescence time lapse imaging on brain slice cultures from transgenic mice expressing firefly luciferase under the mPer1 promoter. The results show that individual SCN neuron oscillators are coupled but display different phases in different regions of the SCN.
    • (2003) Science , vol.302 , pp. 1408-1412
    • Yamaguchi, S.1    Isejima, H.2    Matsuo, T.3    Okura, R.4    Yagita, K.5    Kobayashi, M.6    Okamura, H.7
  • 15
    • 11144311974 scopus 로고    scopus 로고
    • Bioluminescence imaging of individual fibroblasts reveals persistent, independently phased circadian rhythms of clock gene expression
    • ••] also demonstrates that circadian gene expression persists during the cell cycle and that the circadian clock gates cell division to distinct time windows.
    • (2004) Curr Biol , vol.14 , pp. 2289-2295
    • Welsh, K.L.1    Yoo, S.H.2    Liu, A.C.3    Takahashi, J.S.4    Kay, S.A.5
  • 16
    • 0041845302 scopus 로고    scopus 로고
    • Oscillations, clocks and segmentation
    • Y. Bessho, and R. Kageyama Oscillations, clocks and segmentation Curr Opin Genet Dev 13 2003 379 384
    • (2003) Curr Opin Genet Dev , vol.13 , pp. 379-384
    • Bessho, Y.1    Kageyama, R.2
  • 17
    • 6344263666 scopus 로고    scopus 로고
    • Modeling the synchronization of yeast respiratory oscillations
    • M.A. Henson Modeling the synchronization of yeast respiratory oscillations J Theor Biol 231 2004 443 458
    • (2004) J Theor Biol , vol.231 , pp. 443-458
    • Henson, M.A.1
  • 18
    • 4544254441 scopus 로고    scopus 로고
    • Circadian timing mechanism in the prokaryotic clock system of cyanobacteria
    • H. Iwasaki, and T. Kondo Circadian timing mechanism in the prokaryotic clock system of cyanobacteria J Biol Rhythms 19 2004 436 444
    • (2004) J Biol Rhythms , vol.19 , pp. 436-444
    • Iwasaki, H.1    Kondo, T.2
  • 19
    • 4544359281 scopus 로고    scopus 로고
    • The neurospora circadian system
    • J.C. Dunlap, and J.J. Loros The neurospora circadian system J Biol Rhythms 19 2004 414 424
    • (2004) J Biol Rhythms , vol.19 , pp. 414-424
    • Dunlap, J.C.1    Loros, J.J.2
  • 20
    • 4544282973 scopus 로고    scopus 로고
    • The Arabidopsis thaliana clock
    • P.A. Salome, and C.R. McClung The Arabidopsis thaliana clock J Biol Rhythms 19 2004 425 435
    • (2004) J Biol Rhythms , vol.19 , pp. 425-435
    • Salome, P.A.1    McClung, C.R.2
  • 21
    • 4544356423 scopus 로고    scopus 로고
    • Transcription regulation within the circadian clock: The E-box and beyond
    • P.E. Hardin Transcription regulation within the circadian clock: the E-box and beyond J Biol Rhythms 19 2004 348 360
    • (2004) J Biol Rhythms , vol.19 , pp. 348-360
    • Hardin, P.E.1
  • 22
    • 0037194790 scopus 로고    scopus 로고
    • Coordination of circadian timing in mammals
    • S.M. Reppert, and D.R. Weaver Coordination of circadian timing in mammals Nature 418 2002 935 941
    • (2002) Nature , vol.418 , pp. 935-941
    • Reppert, S.M.1    Weaver, D.R.2
  • 23
    • 0025044560 scopus 로고
    • Feedback of the Drosophila period gene product on circadian cycling of its messenger RNA levels
    • P.E. Hardin, J.C. Hall, and M. Rosbash Feedback of the Drosophila period gene product on circadian cycling of its messenger RNA levels Nature 343 1990 536 540
    • (1990) Nature , vol.343 , pp. 536-540
    • Hardin, P.E.1    Hall, J.C.2    Rosbash, M.3
  • 24
    • 0033375755 scopus 로고    scopus 로고
    • Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora
    • J.C. Leloup, D. Gonze, and A. Goldbeter Limit cycle models for circadian rhythms based on transcriptional regulation in Drosophila and Neurospora J Biol Rhythms 14 1999 433 448
    • (1999) J Biol Rhythms , vol.14 , pp. 433-448
    • Leloup, J.C.1    Gonze, D.2    Goldbeter, A.3
  • 25
    • 0037795575 scopus 로고    scopus 로고
    • Toward a detailed computational model for the mammalian circadian clock
    • J.C. Leloup, and A. Goldbeter Toward a detailed computational model for the mammalian circadian clock Proc Natl Acad Sci USA 100 2003 7051 7056
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 7051-7056
    • Leloup, J.C.1    Goldbeter, A.2
  • 26
    • 3042810019 scopus 로고    scopus 로고
    • Resilient circadian oscillator revealed in individual cyanobacteria
    • I. Mihalcescu, W. Hsing, and S. Leibler Resilient circadian oscillator revealed in individual cyanobacteria Nature 430 2004 81 85 This study shows that individual cyanobacteria contain self-sustained circadian oscillators that, although they do not communicate significantly between cells, remain synchronized during extended time periods under constant conditions.
    • (2004) Nature , vol.430 , pp. 81-85
    • Mihalcescu, I.1    Hsing, W.2    Leibler, S.3
  • 27
    • 0023869867 scopus 로고
    • Circadian clock in cell culture: I. Oscillation of melatonin release from dissociated chick pineal cells in flow-through microcarrier culture
    • L.M. Robertson, and J.S. Takahashi Circadian clock in cell culture: I. Oscillation of melatonin release from dissociated chick pineal cells in flow-through microcarrier culture J Neurosci 8 1988 12 21
    • (1988) J Neurosci , vol.8 , pp. 12-21
    • Robertson, L.M.1    Takahashi, J.S.2
  • 28
    • 0141889955 scopus 로고    scopus 로고
    • Control mechanism of the circadian clock for timing of cell division in vivo
    • T. Matsuo, S. Yamaguchi, S. Mitsui, A. Emi, F. Shimoda, and H. Okamura Control mechanism of the circadian clock for timing of cell division in vivo Science 302 2003 255 259 Upon partial hepatectomy in mice, virtually all remaining hepatocytes (25% of original tissue mass) enter S-phase and proliferate to replace the amputated part (75% of original tissue mass). The authors show that mitosis but not S-phase is strongly gated by the circadian liver clock. This gating is probably accomplished by the circadian expression of various cell cycle regulators, most notably Wee1.
    • (2003) Science , vol.302 , pp. 255-259
    • Matsuo, T.1    Yamaguchi, S.2    Mitsui, S.3    Emi, A.4    Shimoda, F.5    Okamura, H.6
  • 29
    • 0344232726 scopus 로고    scopus 로고
    • Light regulates the cell cycle in zebrafish
    • M.P. Dekens, C. Santoriello, D. Vallone, G. Grassi, D. Whitmore, and N.S. Foulkes Light regulates the cell cycle in zebrafish Curr Biol 13 2003 2051 2057 This paper shows that light cycles gate DNA synthesis to particular time windows in zebrafish larvae and cell lines and that this gating involves the circadian clock.
    • (2003) Curr Biol , vol.13 , pp. 2051-2057
    • Dekens, M.P.1    Santoriello, C.2    Vallone, D.3    Grassi, G.4    Whitmore, D.5    Foulkes, N.S.6
  • 30
    • 11144353910 scopus 로고    scopus 로고
    • PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues
    • S.H. Yoo, S. Yamazaki, P.L. Lowrey, K. Shimomura, C.H. Ko, E.D. Buhr, S.M. Siepka, H.K. Hong, W.J. Oh, and O.J. Yoo PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues Proc Natl Acad Sci USA 101 2004 5339 5346 This is an important piece of work, demonstrating that circadian oscillators of peripheral tissues are much more robust than hitherto expected. These clocks keep ticking even in mice whose master pacemaker, the SCN, has been lesioned, albeit in an uncoordinated manner. The study thus suggests that the SCN synchronizes but does not reinforce peripheral circadian oscillations.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 5339-5346
    • Yoo, S.H.1    Yamazaki, S.2    Lowrey, P.L.3    Shimomura, K.4    Ko, C.H.5    Buhr, E.D.6    Siepka, S.M.7    Hong, H.K.8    Oh, W.J.9    Yoo, O.J.10
  • 31
    • 0033637383 scopus 로고    scopus 로고
    • Restricted feeding uncouples circadian oscillators in peripheral tissues from the central pacemaker in the suprachiasmatic nucleus
    • F. Damiola, N. Le Minh, N. Preitner, B. Kornmann, F. Fleury-Olela, and U. Schibler Restricted feeding uncouples circadian oscillators in peripheral tissues from the central pacemaker in the suprachiasmatic nucleus Genes Dev 14 2000 2950 2961
    • (2000) Genes Dev , vol.14 , pp. 2950-2961
    • Damiola, F.1    Le Minh, N.2    Preitner, N.3    Kornmann, B.4    Fleury-Olela, F.5    Schibler, U.6
  • 32
    • 0035910387 scopus 로고    scopus 로고
    • Entrainment of the circadian clock in the liver by feeding
    • K.A. Stokkan, S. Yamazaki, H. Tei, Y. Sakaki, and M. Menaker Entrainment of the circadian clock in the liver by feeding Science 291 2001 490 493
    • (2001) Science , vol.291 , pp. 490-493
    • Stokkan, K.A.1    Yamazaki, S.2    Tei, H.3    Sakaki, Y.4    Menaker, M.5
  • 33
    • 0035059442 scopus 로고    scopus 로고
    • Restricted feeding entrains liver clock without participation of the suprachiasmatic nucleus
    • R. Hara, K. Wan, H. Wakamatsu, R. Aida, T. Moriya, M. Akiyama, and S. Shibata Restricted feeding entrains liver clock without participation of the suprachiasmatic nucleus Genes Cells 6 2001 269 278
    • (2001) Genes Cells , vol.6 , pp. 269-278
    • Hara, R.1    Wan, K.2    Wakamatsu, H.3    Aida, R.4    Moriya, T.5    Akiyama, M.6    Shibata, S.7
  • 34
    • 0141509017 scopus 로고    scopus 로고
    • Peripheral circadian oscillators in mammals: Time and food
    • U. Schibler, J. Ripperger, and S.A. Brown Peripheral circadian oscillators in mammals: time and food J Biol Rhythms 18 2003 250 260
    • (2003) J Biol Rhythms , vol.18 , pp. 250-260
    • Schibler, U.1    Ripperger, J.2    Brown, S.A.3
  • 35
    • 4344699146 scopus 로고    scopus 로고
    • The adaptive value of circadian clocks: An experimental assessment in cyanobacteria
    • M.A. Woelfle, Y. Ouyang, K. Phanvijhitsiri, and C.H. Johnson The adaptive value of circadian clocks: an experimental assessment in cyanobacteria Curr Biol 14 2004 1481 1486 This report, together with an earlier paper published in 1998 by the same group [49], shows that cyanobacteria with a circadian clock that resonates with the light-dark cycle have a selective growth advantage over cyanobacteria that are clock-less or harbor a non-resonating clock. However, under constant conditions arrhythmic cyanobacteria are at least as fit as rhythmic ones.
    • (2004) Curr Biol , vol.14 , pp. 1481-1486
    • Woelfle, M.A.1    Ouyang, Y.2    Phanvijhitsiri, K.3    Johnson, C.H.4
  • 36
    • 0035919479 scopus 로고    scopus 로고
    • Regulation of clock and NPAS2 DNA binding by the redox state of NAD cofactors
    • J. Rutter, M. Reick, L.C. Wu, and S.L. McKnight Regulation of clock and NPAS2 DNA binding by the redox state of NAD cofactors Science 293 2001 510 514
    • (2001) Science , vol.293 , pp. 510-514
    • Rutter, J.1    Reick, M.2    Wu, L.C.3    McKnight, S.L.4
  • 38
    • 3343024625 scopus 로고    scopus 로고
    • Reciprocal regulation of haem biosynthesis and the circadian clock in mammals
    • K. Kaasik, and C.C. Lee Reciprocal regulation of haem biosynthesis and the circadian clock in mammals Nature 430 2004 467 471 The authors examined the physiological role of NPAS2-heme binding (see [37]) in vivo (mouse liver) and uncovered a metabolic heme cycle that might be coupled to the molecular circadian oscillator (see Figure 2). This paper also suggests that the purported repressor PER2 can act as an activator when bound to NPAS2 via heme.
    • (2004) Nature , vol.430 , pp. 467-471
    • Kaasik, K.1    Lee, C.C.2
  • 43
    • 0035209295 scopus 로고    scopus 로고
    • Clock control of ultradian respiratory oscillation found during yeast continuous culture
    • D.B. Murray, S. Roller, H. Kuriyama, and D. Lloyd Clock control of ultradian respiratory oscillation found during yeast continuous culture J Bacteriol 183 2001 7253 7259
    • (2001) J Bacteriol , vol.183 , pp. 7253-7259
    • Murray, D.B.1    Roller, S.2    Kuriyama, H.3    Lloyd, D.4
  • 45
    • 0242637469 scopus 로고    scopus 로고
    • The GTS1 gene product facilitates the self-organization of the energy metabolism oscillation in the continuous culture of the yeast Saccharomyces cerevisiae
    • •] hint to the importance of the transcription factor, GTS1, in the modulation of ultradian respiratory cycles.
    • (2003) FEMS Microbiol Lett , vol.228 , pp. 105-110
    • Akiyama, S.1    Tsurugi, K.2
  • 46
    • 0034688173 scopus 로고    scopus 로고
    • A synthetic oscillatory network of transcriptional regulators
    • M.B. Elowitz, and S. Leibler A synthetic oscillatory network of transcriptional regulators Nature 403 2000 335 338
    • (2000) Nature , vol.403 , pp. 335-338
    • Elowitz, M.B.1    Leibler, S.2
  • 47
    • 0034688220 scopus 로고    scopus 로고
    • Circadian clocks limited by noise
    • N. Barkai, and S. Leibler Circadian clocks limited by noise Nature 403 2000 267 268
    • (2000) Nature , vol.403 , pp. 267-268
    • Barkai, N.1    Leibler, S.2
  • 48
    • 0037154293 scopus 로고    scopus 로고
    • Synchronizing genetic relaxation oscillators by intercell signalling
    • D. McMillen, N. Kopell, J. Hasty, and J.J. Collins Synchronizing genetic relaxation oscillators by intercell signalling Proc Natl Acad Sci USA 99 2002 679 684
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 679-684
    • McMillen, D.1    Kopell, N.2    Hasty, J.3    Collins, J.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.