Sensor components for PCR detection of Salmonella in alfalfa sprout irrigation water

Transactions of the American Society of Agricultural Engineers

Volumn 47, Issue 6, 2004, Pages 2137-2144

  Jackson, E ^a   Delwiche, M ^a,d   Barak, J ^b   Charkowski, A ^c   Suslow, T ^d  

^a Univ of California   (United States)

^b WESTERN REGIONAL RESEARCH CENTER   (United States)

^c UNIVERSITY OF WISCONSIN MADISON   (United States)

^d UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Biosensor; Food safety; Pathogens; Real time PCR

Indexed keywords

ASSAYS; BANDPASS FILTERS; HEAT SINKS; IRRIGATION; OPTICAL SENSORS; SEMICONDUCTOR LASERS; THERMAL CYCLING; WATER POLLUTION;

PCR DETECTION; REAL TIME PCR ASSAY; SALMONELLA; SPROUTED SEEDS;

AGRICULTURAL ENGINEERING;

DETECTION METHOD; FOOD SAFETY; IRRIGATION;

AGRICULTURE; BAND PASS FILTERS; IRRIGATION; LASERS; SENSORS; THERMAL CYCLE; WATER POLLUTION;

EID: 14844310919     PISSN: 00012351     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (22)

1. Abbaszadegan, M., P. Stewart, and M. LeChevallier. 1999. A strategy for detection of viruses in groundwater by PCR. Applied and Environ. Microbiology 65(2): 444-449.
2. Abdel-Hamid, I., D. Ivnitski, P. Atanasov, and E. Wilkins. 1999. Highly sensitive flow-injection immunoassay system for rapid detection of bacteria. Analytica Chimica Acta 399(1-2): 99-108.
3. Andrews, W. H., P. B. Mislivec, C. R. Wilson, V. R. Bruce, P. L. Poelma, R. Gibson, M. W. Trucksees, and K. Young. 1982. Microbial hazards associated with bean sprouting. J. Assoc. Off. Anal. Chem. 65(2): 241-248.
4. Belgrader, P., W. Benett, D. Hadley, J. Richards, P. Stratton, R. Mariella Jr., and F. Milanovich. 1999. PCR detection of bacteria in seven minutes. Science 284(5413): 449-450.
5. Bell, C., and A. Kyriakides. 2002. Salmonella: A Practical Approach to the Organism and its Control in Foods. Boston, Mass.: Blackwell Science.
6. Breimer, M. A., Y. Gelfand, and O. A. Sadik. 2003. Integrated capillary fluorescence DNA biosensor. Biosensors and Bioelectronics 18(9): 1135-1147.
7. Bruckner-Lea, C. J., T. Tsukuda, B. Dockendorff, J. C. Follansbee, M. T. Kingsley, C. Ocampo, J. R. Stults, and D. P. Chandler. 2002. Renewable microcolumns for automated DNA purification and flow-through amplification: From sediment samples through polymerase chain reaction. Analytica Chimica Acta 469(1): 129-140.
8. CDC. 2002. Outbreak of Salmonella serovar Kottbus infections associated with eating alfalfa sprouts - Arizona, California, Colorado, and New Mexico, February-April 2001. MMWR 51(1): 7-9.
9. Charkowski, A. O., J. D. Barak, C. Z. Sarreal, and R. E. Mandrell. 2002. Differences in the growth of Salmonella enterica and Escherichia coli O157:H7 on alfalfa sprouts. Applied and Environ. Microbiology 68(6): 3114-3120.
10. Chiu, C., and J. T. Ou. 1996. Rapid identification of Salmonella serovars in feces by specific detection of virulence genes, invA and spvC, by an enrichment broth culture-multiplex PCR combination assay. J. Clinical Microbiology 34(10): 2619-2622.
11. Crosa, J. H., D. J. Brenner, W. H. Ewing, and S. Falkow. 1973. Molecular relationships among the Salmonellae. J. Bacteriology 115(1): 307-315.
12. Edwards, R. A., G. J. Olsen, and S. R. Maloy. 2002. Comparative genomics of closely related salmonellae. Trends in Microbiology 10(2): 94-99.
13. Higgins, J. A., S. Nasarabadi, J. S. Karns, D. R. Shelton, M. Cooper, A. Gbakima, and R. P. Koopman. 2003. A handheld real-time thermal cycler for bacterial pathogen detection. Biosensors and Bioelectmnics 18(9): 1115-1123.
14. Ivnitski, D., I. Abdel-Hamid, P. Atanasov, and E. Wilkins. 1999. Biosensors for detection of pathogenic bacteria. Biosensors and Bioelectronics 14(7): 599-624.
15. Jackson, E. S. 2002. DNA sensor for detection of Salmonella in alfalfa sprout production. MS thesis. Davis, Cal.: University of California.
16. Jenison, R., M. Rihanek, and B. Polisky. 2001. Use of a thin-film biosensor for rapid visual detection of PCR products in a multiplex format. Biosensors and Bioelectronics 16(9-12): 757-763.
17. Mascini, M., G. Marrazza, and I. Palchetti. 2001. DNA electrochemical biosensors. Fresenius' J. Analytical Chemistry 369(1): 15-22.
18. Northrup, M. A., B. Benett, D. Hadley, P. Landre, S. Lehew, J. Richards, and P. Stratton. 1998. A miniature analytical instrument for nucleic acids based on micromachined silicon reaction chambers. Analytical Chemistry 70(5): 918-922.
19. Ogunjimi, A. A., and P. V. Choudary. 1999. Adsorption of endogenous polyphenols relieves the inhibition by fruit juices and fresh produce of immuno-PCR detection of Escherichia coli O157:H7. FEMS Immunology and Medical Microbiology 23(3): 213-220.
20. Tombelli, S., M. Mascini, C. Sacco, and A. P. F. Turner. 2000. A DNA piezoelectric biosensor assay coupled with a polymerase chain reaction for bacterial toxicity determination in environmental samples. Analytica Chimica Acta 418(1): 1-9.
21. U.S. FDA. 1999. Guidance for industry: Reducing microbial food safety hazards for sprouted seeds and guidance for industry: Sampling and microbial testing of spent irrigation water during sprout production. Federal Register 64(207): 57893-57902.
22. Woolley, A. T., D. Hadley, P. Landre, A. J. deMello, R. A. Mathies, and M. A. Northrup. 1996. Functional integration of PCR amplification and capillary electrophoresis in a microfabricated DNA analysis device. Analytical Chemistry 68(23): 4081-4086.