메뉴 건너뛰기




Volumn 51, Issue 3, 2005, Pages 522-531

Determination of CYP2D6 gene copy number by pyrosequencing

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; GENE AMPLIFICATION; GENE IDENTIFICATION; GENE SEQUENCE; GENOME ANALYSIS; GENOTYPE; HUMAN; HUMAN CELL; POLYMERASE CHAIN REACTION; PSEUDOGENE; PYROSEQUENCING; REPRODUCIBILITY; TEMPERATURE;

EID: 14544294868     PISSN: 00099147     EISSN: None     Source Type: Journal    
DOI: 10.1373/clinchem.2004.043182     Document Type: Article
Times cited : (63)

References (36)
  • 2
    • 0024796958 scopus 로고
    • The human debrisoquine 4-hydroxylase (CYP2D) locus: Sequence and identification of the polymorphic CYP2D6 gene, a related gene, and a pseudogene
    • Kimura S, Umeno M, Skoda RC, Meyer UA, Gonzalez FJ. The human debrisoquine 4-hydroxylase (CYP2D) locus: sequence and identification of the polymorphic CYP2D6 gene, a related gene, and a pseudogene. Am J Hum Genet 1989;45:889-904.
    • (1989) Am J Hum Genet , vol.45 , pp. 889-904
    • Kimura, S.1    Umeno, M.2    Skoda, R.C.3    Meyer, U.A.4    Gonzalez, F.J.5
  • 3
    • 0036204756 scopus 로고    scopus 로고
    • Molecular genetics of CYP2D6: Clinical relevance with focus on psychotropic drugs
    • Bertilsson L, Dahl M-L, Dalen P, Al-Shurbaji A. Molecular genetics of CYP2D6: clinical relevance with focus on psychotropic drugs. Br J Clin Pharmacol 2002;53:111-22.
    • (2002) Br J Clin Pharmacol , vol.53 , pp. 111-122
    • Bertilsson, L.1    Dahl, M.-L.2    Dalen, P.3    Al-Shurbaji, A.4
  • 4
    • 79551616728 scopus 로고    scopus 로고
    • Home Page of the Human Cytochrome P450 (CVP) Allele Nomenclature Committee.CYP2D6 allele nomenclature. http://www.imm.ki.se/CYPalleles/cyp2d6.htm (accessed May 24, 2004).
    • CYP2D6 Allele Nomenclature
  • 5
    • 0026629691 scopus 로고
    • Evolution of a highly polymorphic human cytochrome P450 gene cluster: CYP2D6
    • Heim MH, Meyer UA. Evolution of a highly polymorphic human cytochrome P450 gene cluster: CYP2D6. Genomics 1992;14:49-58
    • (1992) Genomics , vol.14 , pp. 49-58
    • Heim, M.H.1    Meyer, U.A.2
  • 6
    • 0027136288 scopus 로고
    • Inherited amplification of an active gene in the cytochrome P450 CYP2D locus as a cause of ultrarapid metabolism of debrisoquine
    • Johansson I, Lundqvist E, Bertilsson L, Dahl ML, Sjoqvist F, Ingelman-Sundberg M. Inherited amplification of an active gene in the cytochrome P450 CYP2D locus as a cause of ultrarapid metabolism of debrisoquine. Proc Natl Acad Sci U S A 1993;90:11825-9.
    • (1993) Proc Natl Acad Sci U S A , vol.90 , pp. 11825-11829
    • Johansson, I.1    Lundqvist, E.2    Bertilsson, L.3    Dahl, M.L.4    Sjoqvist, F.5    Ingelman-Sundberg, M.6
  • 7
    • 0033871198 scopus 로고    scopus 로고
    • Rapid detection of the CYP2D6*3, CYP2D6*4, and CYP2D6*6 alleles by tetra-primer PCR and of the CYP2D6*5 allele by multiplex long PCR
    • Hersberger M, Marti-Jaun J, Rentsch K, Hänseier E. Rapid detection of the CYP2D6*3, CYP2D6*4, and CYP2D6*6 alleles by tetra-primer PCR and of the CYP2D6*5 allele by multiplex long PCR. Clin Chem 2000;46:1072-7.
    • (2000) Clin Chem , vol.46 , pp. 1072-1077
    • Hersberger, M.1    Marti-Jaun, J.2    Rentsch, K.3    Hänseier, E.4
  • 8
    • 0031949132 scopus 로고    scopus 로고
    • 10-Hydroxylation of nortriptyline in white persons with 0, 1, 2, 3, and 13 functional CYP2D6 genes
    • Dalen P, Dahl ML, Ruiz ML, Nordin J, Bertilsson L. 10-Hydroxylation of nortriptyline in white persons with 0, 1, 2, 3, and 13 functional CYP2D6 genes. Clin Pharmacol Ther 1998;63:444-52.
    • (1998) Clin Pharmacol Ther , vol.63 , pp. 444-452
    • Dalen, P.1    Dahl, M.L.2    Ruiz, M.L.3    Nordin, J.4    Bertilsson, L.5
  • 9
    • 0029064096 scopus 로고
    • Ultrarapid hydroxylation of debrisoquine in a Swedish population. Analysis of the molecular genetic basis
    • Dahl ML, Johansson I, Bertilsson L, Ingelman-Sundberg M, Sjoqvist F. Ultrarapid hydroxylation of debrisoquine in a Swedish population. Analysis of the molecular genetic basis. J Pharmacol Exp Ther 1995;274:516-20.
    • (1995) J Pharmacol Exp Ther , vol.274 , pp. 516-520
    • Dahl, M.L.1    Johansson, I.2    Bertilsson, L.3    Ingelman-Sundberg, M.4    Sjoqvist, F.5
  • 10
    • 0033987060 scopus 로고    scopus 로고
    • Cytochrome P450 2D6 genotype and steady state plasma levels of risperidone and 9-hydroxyrisperidone
    • Berl
    • Scordo MG, Spina E, Facciola G, Avenoso A, Johansson I, Dahl ML. Cytochrome P450 2D6 genotype and steady state plasma levels of risperidone and 9-hydroxyrisperidone. Psychopharmacology (Berl) 1999;147:300-5.
    • (1999) Psychopharmacology , vol.147 , pp. 300-305
    • Scordo, M.G.1    Spina, E.2    Facciola, G.3    Avenoso, A.4    Johansson, I.5    Dahl, M.L.6
  • 11
    • 0030432585 scopus 로고    scopus 로고
    • Frequent distribution of ultrarapid metabolizers of debrisoquine in an Ethiopian population carrying duplicated and multiduplicated functional CYP2D6 alleles
    • Aklillu E, Persson I, Bertilsson L, Johansson I, Rodrigues F, Ingelman-Sundberg M. Frequent distribution of ultrarapid metabolizers of debrisoquine in an Ethiopian population carrying duplicated and multiduplicated functional CYP2D6 alleles. J Pharmacol Exp Ther 1996;278:441-6.
    • (1996) J Pharmacol Exp Ther , vol.278 , pp. 441-446
    • Aklillu, E.1    Persson, I.2    Bertilsson, L.3    Johansson, I.4    Rodrigues, F.5    Ingelman-Sundberg, M.6
  • 14
    • 0346363770 scopus 로고    scopus 로고
    • CYP2D6 genotyping strategy based on gene copy number determination by TaqMan real-time PCR
    • Schaeffeler E, Schwab M, Eichelbaum M, Zanger UM. CYP2D6 genotyping strategy based on gene copy number determination by TaqMan real-time PCR. Hum Mutat 2003;22:476-85.
    • (2003) Hum Mutat , vol.22 , pp. 476-485
    • Schaeffeler, E.1    Schwab, M.2    Eichelbaum, M.3    Zanger, U.M.4
  • 15
    • 0032540905 scopus 로고    scopus 로고
    • A sequencing method based on real-time pyrophosphate
    • Ronaghi M, Uhlen M, Nyren P. A sequencing method based on real-time pyrophosphate. Science 1998;281:363, 365.
    • (1998) Science , vol.281 , pp. 363
    • Ronaghi, M.1    Uhlen, M.2    Nyren, P.3
  • 16
    • 0036020078 scopus 로고    scopus 로고
    • Pyrosequencing technology and the need for versatile solutions in molecular clinical research
    • Berg LM, Sanders R, Alderborn A. Pyrosequencing technology and the need for versatile solutions in molecular clinical research [Review]. Expert Rev Mol Diagn 2002;2:361-9.
    • (2002) Expert Rev Mol Diagn , vol.2 , pp. 361-369
    • Berg, L.M.1    Sanders, R.2    Alderborn, A.3
  • 18
    • 0033824460 scopus 로고    scopus 로고
    • Determination of single-nucleotide polymorphisms by real-time pyrophosphate DNA sequencing
    • Alderborn A, Kristofferson A, Hammerling U. Determination of single-nucleotide polymorphisms by real-time pyrophosphate DNA sequencing. Genome Res 2000;10:1249-58.
    • (2000) Genome Res , vol.10 , pp. 1249-1258
    • Alderborn, A.1    Kristofferson, A.2    Hammerling, U.3
  • 19
    • 0034622620 scopus 로고    scopus 로고
    • Mutation detection by pyrosequencing: Sequencing of exons 5-8 of the p53 tumor suppressor gene
    • Garcia CA, Ahmadian A, Gharizadeh B, Lundeberg J, Ronaghi M, Nyren P. Mutation detection by pyrosequencing: sequencing of exons 5-8 of the p53 tumor suppressor gene. Gene 2000;253:249-57.
    • (2000) Gene , vol.253 , pp. 249-257
    • Garcia, C.A.1    Ahmadian, A.2    Gharizadeh, B.3    Lundeberg, J.4    Ronaghi, M.5    Nyren, P.6
  • 20
    • 0042490798 scopus 로고    scopus 로고
    • Evidence for selective advantage of pathogenic FGFR2 mutations in the male germ line
    • Goriely A, McVean GA, Rojmyr M, Ingemarsson B, Wilkie AO. Evidence for selective advantage of pathogenic FGFR2 mutations in the male germ line. Science 2003;301:643-6.
    • (2003) Science , vol.301 , pp. 643-646
    • Goriely, A.1    McVean, G.A.2    Rojmyr, M.3    Ingemarsson, B.4    Wilkie, A.O.5
  • 21
    • 0036240638 scopus 로고    scopus 로고
    • Classification, identification and subtyping of bacteria based on Pyrosequencing and signature matching of 16S rDNA fragments
    • Jonasson J, Olofsson M, Monstein HJ. Classification, identification and subtyping of bacteria based on Pyrosequencing and signature matching of 16S rDNA fragments. APMIS 2002;110:263-72.
    • (2002) APMIS , vol.110 , pp. 263-272
    • Jonasson, J.1    Olofsson, M.2    Monstein, H.J.3
  • 22
    • 0042736146 scopus 로고    scopus 로고
    • High-throughput Pyrosequencing of a phage display library for the identification of enriched target-specific peptides
    • Rahim A, Coutelle C, Harbottle R. High-throughput Pyrosequencing of a phage display library for the identification of enriched target-specific peptides. Biotechniques 2003;735:317-24.
    • (2003) Biotechniques , vol.735 , pp. 317-324
    • Rahim, A.1    Coutelle, C.2    Harbottle, R.3
  • 23
    • 0036590014 scopus 로고    scopus 로고
    • Estimation of single nucleotide polymorphism allele frequency in DNA pools using Pyrosequencing
    • Gruber JD, Colligan PB, Wolford JK. Estimation of single nucleotide polymorphism allele frequency in DNA pools using Pyrosequencing. Hum Genet 2002;110:395-401.
    • (2002) Hum Genet , vol.110 , pp. 395-401
    • Gruber, J.D.1    Colligan, P.B.2    Wolford, J.K.3
  • 24
    • 0036244765 scopus 로고    scopus 로고
    • Rapid SNP allele frequency determination in genomic DNA pools by Pyrosequencing
    • Neve B, Froguel P, Corset L, Vaillant E, Vatin V, Boutin P. Rapid SNP allele frequency determination in genomic DNA pools by Pyrosequencing. Biotechniques 2002;32:1138-42.
    • (2002) Biotechniques , vol.32 , pp. 1138-1142
    • Neve, B.1    Froguel, P.2    Corset, L.3    Vaillant, E.4    Vatin, V.5    Boutin, P.6
  • 25
    • 0347988090 scopus 로고    scopus 로고
    • Pyrosequencing-based SNP allele frequency estimation in DNA pools
    • Lavebratt C, Sengul S, Jansson M, Schalling M. Pyrosequencing-based SNP allele frequency estimation in DNA pools. Hum Mutat 2004;23:92-7.
    • (2004) Hum Mutat , vol.23 , pp. 92-97
    • Lavebratt, C.1    Sengul, S.2    Jansson, M.3    Schalling, M.4
  • 26
    • 0038002236 scopus 로고    scopus 로고
    • Analysis and quantification of multiple methylation variable positions in CpG islands by Pyrosequencing
    • Tost J, Dunker J, Gut IG. Analysis and quantification of multiple methylation variable positions in CpG islands by Pyrosequencing. Biotechniques 2003;35:152-6.
    • (2003) Biotechniques , vol.35 , pp. 152-156
    • Tost, J.1    Dunker, J.2    Gut, I.G.3
  • 27
    • 0038678777 scopus 로고    scopus 로고
    • Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites
    • Colella S, Shen L, Baggerly KA, Issa JP, Krahe R. Sensitive and quantitative universal Pyrosequencing methylation analysis of CpG sites. Biotechniques 2003;35:146-50.
    • (2003) Biotechniques , vol.35 , pp. 146-150
    • Colella, S.1    Shen, L.2    Baggerly, K.A.3    Issa, J.P.4    Krahe, R.5
  • 28
    • 0042843050 scopus 로고    scopus 로고
    • Cytochrome P450 genotyping by multiplexed real-time DNA sequencing with Pyrosequencing technology
    • Eriksson S, Berg L, Wadelius M, Alderborn A. Cytochrome P450 genotyping by multiplexed real-time DNA sequencing with Pyrosequencing technology. Assay Drug Dev Technol 2002;1:49-59.
    • (2002) Assay Drug Dev Technol , vol.1 , pp. 49-59
    • Eriksson, S.1    Berg, L.2    Wadelius, M.3    Alderborn, A.4
  • 29
    • 0242637084 scopus 로고    scopus 로고
    • Identification of CYP2D6 alleles by single nucleotide polymorphism analysis using pyrosequencing
    • Zackrisson AL, Lindblom B. Identification of CYP2D6 alleles by single nucleotide polymorphism analysis using pyrosequencing. Eur J Clin Pharmacol 2003;59:521-6.
    • (2003) Eur J Clin Pharmacol , vol.59 , pp. 521-526
    • Zackrisson, A.L.1    Lindblom, B.2
  • 32
    • 4744365529 scopus 로고    scopus 로고
    • CYP3A5 polymorphism and the ethnic differences in cyclosporine pharmacokinetics in healthy subjects
    • Min DI, Ellingrod VL, Marsh S, McLeod H. CYP3A5 polymorphism and the ethnic differences in cyclosporine pharmacokinetics in healthy subjects. Ther Drug Monit 2004;26:524-8.
    • (2004) Ther Drug Monit , vol.26 , pp. 524-528
    • Min, D.I.1    Ellingrod, V.L.2    Marsh, S.3    McLeod, H.4
  • 34
    • 0007293059 scopus 로고    scopus 로고
    • Ultrarapid metabolizers of debrisoquine: Characterization and PCR-based detection of alleles with duplication of the CYP2D6 gene
    • Lovlie R, Daly AK, Molven A, Idle JR, Steen VM. Ultrarapid metabolizers of debrisoquine: characterization and PCR-based detection of alleles with duplication of the CYP2D6 gene. FEBS 1996;392:30-4.
    • (1996) FEBS , vol.392 , pp. 30-34
    • Lovlie, R.1    Daly, A.K.2    Molven, A.3    Idle, J.R.4    Steen, V.M.5
  • 35
    • 0037490802 scopus 로고    scopus 로고
    • Analysis of the Glutathione S-transferase M1 gene using pyrosequencing and multiplex PCR - No evidence of association to glaucoma
    • Jansson M, Rada A, Tomic L, Larsson L-I, Wadelius C. Analysis of the Glutathione S-transferase M1 gene using pyrosequencing and multiplex PCR - no evidence of association to glaucoma. Exp Eye Res 2003;77:239-43.
    • (2003) Exp Eye Res , vol.77 , pp. 239-243
    • Jansson, M.1    Rada, A.2    Tomic, L.3    Larsson, L.-I.4    Wadelius, C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.