Analysis of noncovalent complexes between human telomeric DNA and polyamides containing N-methylpyrrole and N-methylimidazole by using electrospray ionization mass spectrometry

Chemistry - A European Journal

Volumn 11, Issue 4, 2005, Pages 1157-1162

  Zhou, Jiang ^a   Yuan, Gu ^a  

^a PEKING UNIVERSITY   (China)

Author keywords

DNA recognition; Human telomeric DNA; Mass spectrometry; Noncovalent interactions; Polyamides

Indexed keywords

DNA; IONIZATION; MASS SPECTROMETRY; POLYAMIDES; SPECTRUM ANALYSIS;

BINDING AFFINITY; ELECTROSPRAY IONIZATION MASS SPECTROMETRY (ESI-MS); IMIDAZOLE; N-METHYLPYRROLE (PY);

COMPLEXATION;

1 METHYLIMIDAZOLE; 1 METHYLPYRROLE; DNA; DOUBLE STRANDED DNA; POLYAMIDE; TELOMERASE;

ARTICLE; BINDING AFFINITY; BINDING ASSAY; BINDING KINETICS; CHEMICAL ANALYSIS; CHEMICAL INTERACTION; CHEMICAL REACTION; CHEMICAL STRUCTURE; COMPLEX FORMATION; DNA BINDING; DNA SEQUENCE; DNA STRUCTURE; DRUG SYNTHESIS; ELECTROSPRAY MASS SPECTROMETRY; MOLECULAR RECOGNITION; MOLECULAR STABILITY; REACTION ANALYSIS; STEREOCHEMISTRY; STOICHIOMETRY; STRUCTURE ANALYSIS; TECHNIQUE; TELOMERE;

DNA; HUMANS; IMIDAZOLES; MOLECULAR STRUCTURE; NYLONS; OLIGONUCLEOTIDES; PYRROLES; SENSITIVITY AND SPECIFICITY; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; TELOMERE;

EID: 14544270274     PISSN: 09476539     EISSN: None     Source Type: Journal    
DOI: 10.1002/chem.200400803     Document Type: Article

References (27)

1. K. Collins, Curr. Opin. Cell Biol. 2000, 12, 378-383.
2. F. Lavelle, J. F. Riou, A. Laoui, P. Mailliet, Crit. Rev. Oncol. Hematol. 2090, 34, 111-126.
3. E. Hiyama, K. Hiyama, T. Yokoyama, Y. Matsuura, M. A. Piatyszek, J. W. Shay, Nat. Med. 1995, 1, 249-255.
4. N. W. Kim, M. A. Piatyszek, K. R. Prowse, C. B. Harley, M. D. West, P. L. C. Ho, G. M. Coviello, W. E. Wright, S. L. Weinrich, J. W. Shay, Science 1994, 266, 2011-2015.
5. D. Hanahan, R. A. Weinberg, Cell 2000, 100, 57-70.
6. E. M. Rezler, D. J. Bearss, L. H. Hurley, Annu. Rev. Pharmacol. Toxicol. 2003, 43, 359-379.
7. D. E. Wemmer, P. B. Dervan, Curr. Opin. Struct. Biol. 1997, 7, 355-361.
8. P. B. Dervan, R. W. Burli, Curr. Opin. Chem. Biol. 1999, 3, 688-693.
9. J. M. Gottesfeld, L. Neely, J. W. Trauger, E. E. Baird, P. B. Dervan, Nature 1997, 387, 202-205.
10. J. H. Xiao, G. Yuan, W. Q. Huang, A. S. C. Chan, K. L. D. Lee, J. Org. Chem. 2000, 65, 5506-5513.
11. R. D. Smith, J. E. Bruce, Q. Wu, Q. P. Lei, Chem. Soc. Rev. 1997, 26, 191-202.
12. J. A. Loo, Mass Spectrom. Rev. 1997, 16, 1-23.
13. K. J. Light-Wahl, D. L. Springer, B. E. Winger, C. G. Edmonds, D. G. Camp, B. D. Thrall, R. D. Smith, J. Am. Chem. Soc. 1993, 115, 803-804.
14. D. C. Gale, D. R. Goodlett, K. J. Light-Wahl, R. D. Smith, J. Am. Chem. Soc. 1994, 116, 6027-6028.
15. V. Gabelica, E. De Pauw, F. Rosu, J. Mass. Spectr. 1999, 34, 1328-1337.
16. K. X. Wan, T. Shibue, M. L. Gross, J. Am. Chem. Soc. 2000, 122, 300-307.
17. M. L. Reyzer, J. S. Brodbelt, S. M. Kerwin, D. Kumar, Nucleic Acids Res. 2001, 29, e103.
18. W. M. David, J. Brodbelt, S. M. Kerwin, P. W. Thomas, Anal. Chem. 2002, 74, 2029-2033.
19. F. Rosu, V. Gabelica, C. Houssier, E. De Pauw, Nucleic Acids Res. 2002, 30, e82.
20. F. Rosu, V. Gabelica, K. Y. Shin, E. De Pauw, Chem. Commun. 2003, 2072-2073.
21. R. H. Griffey, S. A. Hofstadler, K. A. Sannes-Lowery, D. J. Ecker, S. T. Crooke, Proc. Natl. Acad. Sci. USA 1999, 96, 10129-10133.
22. R. H. Griffey, K. A. Sannes-Lowery, J. J. Drader, V. Mohan, E. E. Swayze, S. A. Hofstadler, J. Am. Chem. Soc. 2000, 122, 9933-9938.
23. S. E. Swalley, E. E. Baird, P. B. Dervan, J. Am. Chem. Soc. 1999, 121, 1113-1120.
24. M. Mrksich, M. E. Parks, P. B. Dervan, J. Am. Chem. Soc. 1994, 116, 7983-7988.
25. P. E. Floreancig, S. E. Swalley, J. W. Trauger, P. B. Dervan, J. Am. Chem. Soc. 2000, 122, 6342-6350.
26. J. M. Turner, S. E. Swalley, E. E. Baird, P. B. Dervan, J. Am. Chem. Soc. 1998, 120, 6219-6226.
27. R. P. L. De Clairac, B. H. Geierstanger, M. Mrksich, P. B. Dervan, D. E. Wemmer, J. Am. Chem. Soc. 1997, 119, 7909-7916.