메뉴 건너뛰기




Volumn 44, Issue 7, 2005, Pages 2566-2576

Mechanism of the guanine nucleotide exchange reaction of ras GTPase-evidence for a GTP/GDP displacement model

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVATION ANALYSIS; BIOCHEMISTRY; CATALYSIS; COMPLEXATION; CONCENTRATION (PROCESS); DISSOCIATION; ENERGY TRANSFER; FLUORESCENCE; HYDROPHOBICITY; PHOSPHATES; REACTION KINETICS; RESONANCE;

EID: 14044276363     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi048755w     Document Type: Article
Times cited : (35)

References (49)
  • 1
    • 0026608238 scopus 로고
    • The Son of sevenless gene product: A putative activator of Ras
    • Bonfini, L., Karlovich, C. A., Dasgupta, C., and Banerjee, U. (1992) The Son of sevenless gene product: a putative activator of Ras, Science 255, 603-606.
    • (1992) Science , vol.255 , pp. 603-606
    • Bonfini, L.1    Karlovich, C.A.2    Dasgupta, C.3    Banerjee, U.4
  • 2
    • 0032524389 scopus 로고    scopus 로고
    • RasGRP, a Ras guanyl nucleotide-releasing protein with calcium- and diacylglycerol-binding motifs
    • Ebinu, J. O., Bottorff, D. A., Chan, E. Y., Stang, S. L., Dunn, R. J., and Stone, J. C. (1998) RasGRP, a Ras guanyl nucleotide-releasing protein with calcium- and diacylglycerol-binding motifs, Science 280, 1082-1086.
    • (1998) Science , vol.280 , pp. 1082-1086
    • Ebinu, J.O.1    Bottorff, D.A.2    Chan, E.Y.3    Stang, S.L.4    Dunn, R.J.5    Stone, J.C.6
  • 3
    • 0037018244 scopus 로고    scopus 로고
    • SmgGDS displays differential binding and exchange activity towards different Ras isoforms
    • Vikis, H. G., Stewart, S., and Guan, K. L. (2002) SmgGDS displays differential binding and exchange activity towards different Ras isoforms, Oncogene 21, 2425-2432.
    • (2002) Oncogene , vol.21 , pp. 2425-2432
    • Vikis, H.G.1    Stewart, S.2    Guan, K.L.3
  • 5
    • 0031026133 scopus 로고    scopus 로고
    • Cloning and characterization of Ras-GRF2, a novel guanine nucleotide exchange factor for Ras
    • Fam, N. P., Fan, W. T., Wang, Z., Zhang, L. J., Chen, H., and Moran, M. F. (1997) Cloning and characterization of Ras-GRF2, a novel guanine nucleotide exchange factor for Ras, Mol. Cell Biol. 17, 1396-1406.
    • (1997) Mol. Cell Biol. , vol.17 , pp. 1396-1406
    • Fam, N.P.1    Fan, W.T.2    Wang, Z.3    Zhang, L.J.4    Chen, H.5    Moran, M.F.6
  • 6
    • 0029664925 scopus 로고    scopus 로고
    • Phosphorylation-dependent activation of the Ras-GRF/CDC25Mm exchange factor by muscarinic receptors and G-protein beta gamma subunits
    • Mattingly, R. R., and Macara, I. G. (1996) Phosphorylation-dependent activation of the Ras-GRF/CDC25Mm exchange factor by muscarinic receptors and G-protein beta gamma subunits, Nature 382, 268-272.
    • (1996) Nature , vol.382 , pp. 268-272
    • Mattingly, R.R.1    Macara, I.G.2
  • 7
    • 0031582212 scopus 로고    scopus 로고
    • Activation of the exchange factor Ras-GRF by calcium requires an intact Db1 homology domain
    • Freshney, N. W., Goonesekera, S. D., and Feig, L. A. (1997) Activation of the exchange factor Ras-GRF by calcium requires an intact Db1 homology domain, FEBS Lett. 407, 111-115.
    • (1997) FEBS Lett. , vol.407 , pp. 111-115
    • Freshney, N.W.1    Goonesekera, S.D.2    Feig, L.A.3
  • 9
    • 0032538347 scopus 로고    scopus 로고
    • Invasion of the nucleotide snatchers: Structural insights into the mechanism of G protein GEFs
    • Sprang, S. R., and Coleman, D. E. (1998) Invasion of the nucleotide snatchers: structural insights into the mechanism of G protein GEFs, Cell 95, 155-158.
    • (1998) Cell , vol.95 , pp. 155-158
    • Sprang, S.R.1    Coleman, D.E.2
  • 10
    • 0035834388 scopus 로고    scopus 로고
    • The guanine nucleotide-binding switch in three dimensions
    • Vetter, I. R., and Wittinghofer, A. (2001) The guanine nucleotide-binding switch in three dimensions, Science 294, 1299-1304.
    • (2001) Science , vol.294 , pp. 1299-1304
    • Vetter, I.R.1    Wittinghofer, A.2
  • 11
    • 0033179296 scopus 로고    scopus 로고
    • GEFs: Structural basis for their activation of small GTP-binding proteins
    • Cherfils, J., and Chardin, P. (1999) GEFs: structural basis for their activation of small GTP-binding proteins, Trends Biochem. Sci. 24, 306-311.
    • (1999) Trends Biochem. Sci. , vol.24 , pp. 306-311
    • Cherfils, J.1    Chardin, P.2
  • 12
    • 0027502176 scopus 로고
    • Influence of guanine nucleotides on complex formation between Ras and CDC25 proteins
    • Lai, C. C., Boguski, M., Broek, D., and Powers, S. (1993) Influence of guanine nucleotides on complex formation between Ras and CDC25 proteins, Mol. Cell Biol. 13, 1345-1352.
    • (1993) Mol. Cell Biol. , vol.13 , pp. 1345-1352
    • Lai, C.C.1    Boguski, M.2    Broek, D.3    Powers, S.4
  • 13
    • 0027383006 scopus 로고
    • The catalytic domain of the mouse sos1 gene product activates Ras proteins in vivo and in vitro
    • Liu, B. X., Wei, W., and Broek, D. (1993) The catalytic domain of the mouse sos1 gene product activates Ras proteins in vivo and in vitro, Oncogene 8, 3081-3084.
    • (1993) Oncogene , vol.8 , pp. 3081-3084
    • Liu, B.X.1    Wei, W.2    Broek, D.3
  • 14
    • 0022238094 scopus 로고
    • A study of the kinetic mechanism of elongation factor Ts
    • Hwang, Y. W., and Miller, D. L. (1985) A study of the kinetic mechanism of elongation factor Ts, J. Biol. Chem. 260, 11498-11502.
    • (1985) J. Biol. Chem. , vol.260 , pp. 11498-11502
    • Hwang, Y.W.1    Miller, D.L.2
  • 15
    • 0343965776 scopus 로고    scopus 로고
    • Ras signaling. Caught in the act of the switch-on
    • Wittinghofer, F. (1998) Ras signaling. Caught in the act of the switch-on, Nature 394, 317, 319-317, 320.
    • (1998) Nature , vol.394 , Issue.317 , pp. 319-317
    • Wittinghofer, F.1
  • 17
    • 0030025671 scopus 로고    scopus 로고
    • The structure of the Escherichia coli EF-Tu.EF-Ts complex at 2.5 A resolution
    • Kawashima, T., Berthet-Colominas, C., Wulff, M., Cusack, S., and Leberman, R. (1996) The structure of the Escherichia coli EF-Tu.EF-Ts complex at 2.5 A resolution, Nature 379, 511-518.
    • (1996) Nature , vol.379 , pp. 511-518
    • Kawashima, T.1    Berthet-Colominas, C.2    Wulff, M.3    Cusack, S.4    Leberman, R.5
  • 18
    • 0032538317 scopus 로고    scopus 로고
    • Structural basis for activation of ARF GTPase: Mechanisms of guanine nucleotide exchange and GTP-myristoyl switching
    • Goldberg, J. (1998) Structural basis for activation of ARF GTPase: mechanisms of guanine nucleotide exchange and GTP-myristoyl switching, Cell 95, 237-248.
    • (1998) Cell , vol.95 , pp. 237-248
    • Goldberg, J.1
  • 19
    • 0029099915 scopus 로고
    • Structure of guanine-nucleotide-exchange factor human Mss4 and identification of its Rab-interacting surface
    • Yu, H., and Schreiber, S. L. (1995) Structure of guanine-nucleotide- exchange factor human Mss4 and identification of its Rab-interacting surface, Nature 376, 788-791.
    • (1995) Nature , vol.376 , pp. 788-791
    • Yu, H.1    Schreiber, S.L.2
  • 20
    • 0034619877 scopus 로고    scopus 로고
    • Crystal structure of Rac1 in complex with the guanine nucleotide exchange region of Tiam1
    • Worthylake, D. K., Rossman, K. L., and Sondek, J. (2000) Crystal structure of Rac1 in complex with the guanine nucleotide exchange region of Tiam1, Nature 408, 682-688.
    • (2000) Nature , vol.408 , pp. 682-688
    • Worthylake, D.K.1    Rossman, K.L.2    Sondek, J.3
  • 21
    • 0037086652 scopus 로고    scopus 로고
    • A crystallographic view of interactions between Dbs and Cdc42: PH domain-assisted guanine nucleotide exchange
    • Rossman, K. L., Worthylake, D. K., Snyder, J. T., Siderovski, D. P., Campbell, S. L., and Sondek, J. (2002) A crystallographic view of interactions between Dbs and Cdc42: PH domain-assisted guanine nucleotide exchange, EMBO J. 21, 1315-1326.
    • (2002) EMBO J. , vol.21 , pp. 1315-1326
    • Rossman, K.L.1    Worthylake, D.K.2    Snyder, J.T.3    Siderovski, D.P.4    Campbell, S.L.5    Sondek, J.6
  • 23
    • 0035917523 scopus 로고    scopus 로고
    • Structural basis for guanine nucleotide exchange on Ran by the regulator of chromosome condensation (RCC1)
    • Renault, L., Kuhlmann, J., Henkel, A., and Wittinghofer, A. (2001) Structural basis for guanine nucleotide exchange on Ran by the regulator of chromosome condensation (RCC1), Cell 105, 245-255.
    • (2001) Cell , vol.105 , pp. 245-255
    • Renault, L.1    Kuhlmann, J.2    Henkel, A.3    Wittinghofer, A.4
  • 24
    • 0346243924 scopus 로고    scopus 로고
    • Structural snapshots of the mechanism and inhibition of a guanine nucleotide exchange factor
    • Renault, L., Guibert, B., and Cherfils, J. (2003) Structural snapshots of the mechanism and inhibition of a guanine nucleotide exchange factor, Nature 426, 525-530.
    • (2003) Nature , vol.426 , pp. 525-530
    • Renault, L.1    Guibert, B.2    Cherfils, J.3
  • 25
    • 0026657585 scopus 로고
    • IMP dehydrogenase inhibitors reduce intracellular tetrahydrobiopterin levels through reduction of intracellular GTP levels. Indications of the regulation of GTP cyclohydrolase I activity by restriction of GTP availability in the cells
    • Hatakeyama, K., Harada, T., and Kagamiyama, H. (1992) IMP dehydrogenase inhibitors reduce intracellular tetrahydrobiopterin levels through reduction of intracellular GTP levels. Indications of the regulation of GTP cyclohydrolase I activity by restriction of GTP availability in the cells, J. Biol. Chem. 267, 20734-20739.
    • (1992) J. Biol. Chem. , vol.267 , pp. 20734-20739
    • Hatakeyama, K.1    Harada, T.2    Kagamiyama, H.3
  • 26
    • 0142063443 scopus 로고    scopus 로고
    • Structure determination and dynamics of peptides overlapping the catalytic hairpin of the Ras-specific GEF Cdc25(Mm)
    • Consonni, R., Arosio, L, Recca, T., Longhi, R., Colombo, G., and Vanoni, M. (2003) Structure determination and dynamics of peptides overlapping the catalytic hairpin of the Ras-specific GEF Cdc25(Mm), Biochemistry 42, 12154-12162.
    • (2003) Biochemistry , vol.42 , pp. 12154-12162
    • Consonni, R.1    Arosio, L.2    Recca, T.3    Longhi, R.4    Colombo, G.5    Vanoni, M.6
  • 27
    • 0028801195 scopus 로고
    • The kinetic mechanism of Ran-nucleotide exchange catalyzed by RCC1
    • Klebe, C., Prinz, H., Wittinghofer, A., and Goody, R. S. (1995) The kinetic mechanism of Ran-nucleotide exchange catalyzed by RCC1, Biochemistry 34, 12543-12552.
    • (1995) Biochemistry , vol.34 , pp. 12543-12552
    • Klebe, C.1    Prinz, H.2    Wittinghofer, A.3    Goody, R.S.4
  • 28
    • 0032546533 scopus 로고    scopus 로고
    • Kinetic analysis by fluorescence of the interaction between Ras and the catalytic domain of the guanine nucleotide exchange factor Cdc25Mm
    • Lenzen, C., Cool, R. H., Prinz, H., Kuhlmann, I., and Wittinghofer, A. (1998) Kinetic analysis by fluorescence of the interaction between Ras and the catalytic domain of the guanine nucleotide exchange factor Cdc25Mm, Biochemistry 37, 7420-7430.
    • (1998) Biochemistry , vol.37 , pp. 7420-7430
    • Lenzen, C.1    Cool, R.H.2    Prinz, H.3    Kuhlmann, I.4    Wittinghofer, A.5
  • 30
    • 0034687081 scopus 로고    scopus 로고
    • Mechanism of nucleotide release from Rho by the GDP dissociation stimulator protein
    • Hutchinson, J. P., and Eccleston, J. F. (2000) Mechanism of nucleotide release from Rho by the GDP dissociation stimulator protein, Biochemistry 39, 11348-11359.
    • (2000) Biochemistry , vol.39 , pp. 11348-11359
    • Hutchinson, J.P.1    Eccleston, J.F.2
  • 31
    • 0028908679 scopus 로고
    • Substrate and product structural requirements for binding of nucleotides to H-ras p21: The mechanism of discrimination between guanosine and adenosine nucleotides
    • Rensland, H., John, J., Linke, R., Simon, I., Schlichting, I., Wittinghofer, A., and Goody, R. S. (1995) Substrate and product structural requirements for binding of nucleotides to H-ras p21: the mechanism of discrimination between guanosine and adenosine nucleotides, Biochemistry 34, 593-599.
    • (1995) Biochemistry , vol.34 , pp. 593-599
    • Rensland, H.1    John, J.2    Linke, R.3    Simon, I.4    Schlichting, I.5    Wittinghofer, A.6    Goody, R.S.7
  • 32
    • 0026659515 scopus 로고
    • Molecular cloning of cDNAs encoding a guanine-nucleotide-releasing factor for Ras p21
    • Shou, C., Farnsworth, C. L., Neel, B. G., and Feig, L. A. (1992) Molecular cloning of cDNAs encoding a guanine-nucleotide-releasing factor for Ras p21, Nature 358, 351-354.
    • (1992) Nature , vol.358 , pp. 351-354
    • Shou, C.1    Farnsworth, C.L.2    Neel, B.G.3    Feig, L.A.4
  • 33
    • 0035861736 scopus 로고    scopus 로고
    • Basis for signaling specificity difference between Sos and Ras-GRF guanine nucleotide exchange factors
    • Tian, X., and Feig, L. A. (2001) Basis for signaling specificity difference between Sos and Ras-GRF guanine nucleotide exchange factors, J. Biol. Chem. 276, 47248-47256.
    • (2001) J. Biol. Chem. , vol.276 , pp. 47248-47256
    • Tian, X.1    Feig, L.A.2
  • 34
    • 0030773047 scopus 로고    scopus 로고
    • Characterization of the interactions between the small GTPase Cdc42 and its GTPase-activating proteins and putative effectors. Comparison of kinetic properties of Cdc42 binding to the Cdc42-interactive domains
    • Zhang, B., Wang, Z. X., and Zheng, Y. (1997) Characterization of the interactions between the small GTPase Cdc42 and its GTPase-activating proteins and putative effectors. Comparison of kinetic properties of Cdc42 binding to the Cdc42-interactive domains, J. Biol. Chem. 272, 21999-22007.
    • (1997) J. Biol. Chem. , vol.272 , pp. 21999-22007
    • Zhang, B.1    Wang, Z.X.2    Zheng, Y.3
  • 35
    • 0032502733 scopus 로고    scopus 로고
    • Interaction of Rac1 with GTPase-activating proteins and putative effectors. A comparison with Cdc42 and RhoA
    • Zhang, B., Chernoff, J., and Zheng, Y. (1998) Interaction of Rac1 with GTPase-activating proteins and putative effectors. A comparison with Cdc42 and RhoA, J. Biol. Chem. 273, 8776-8782.
    • (1998) J. Biol. Chem. , vol.273 , pp. 8776-8782
    • Zhang, B.1    Chernoff, J.2    Zheng, Y.3
  • 36
    • 0034619422 scopus 로고    scopus 로고
    • Evidence for a second nucleotide binding site in rat elongation factor eEF-2 specific for adenylic nucleotides
    • Gonzalo, P., Sontag, B., Lavergne, J. P., Jault, J. M., and Reboud, J. P. (2000) Evidence for a second nucleotide binding site in rat elongation factor eEF-2 specific for adenylic nucleotides, Biochemistry 39, 13558-13564.
    • (2000) Biochemistry , vol.39 , pp. 13558-13564
    • Gonzalo, P.1    Sontag, B.2    Lavergne, J.P.3    Jault, J.M.4    Reboud, J.P.5
  • 37
    • 0028871610 scopus 로고
    • Interaction of guanosine nucleotides and their analogues with elongation factor Tu from Thermus thermophilus
    • Wagner, A., Simon, I., Sprinzl, M., and Goody, R. S. (1995) Interaction of guanosine nucleotides and their analogues with elongation factor Tu from Thermus thermophilus, Biochemistry 34, 12535-12542.
    • (1995) Biochemistry , vol.34 , pp. 12535-12542
    • Wagner, A.1    Simon, I.2    Sprinzl, M.3    Goody, R.S.4
  • 38
    • 0022515451 scopus 로고
    • Synthesis of 2′, 3′-O-(2,4,6-trinitrocyclohexadienylidine) guanosine 5′-triphosphate and a study of its inhibitory properties with adenylate cyclase
    • Hoyer, P. B., Fletcher, P., and Haley, B. E. (1986) Synthesis of 2′, 3′-O-(2,4,6-trinitrocyclohexadienylidine)guanosine 5′-triphosphate and a study of its inhibitory properties with adenylate cyclase, Arch. Biochem. Biophys. 245, 369-378.
    • (1986) Arch. Biochem. Biophys. , vol.245 , pp. 369-378
    • Hoyer, P.B.1    Fletcher, P.2    Haley, B.E.3
  • 42
    • 0024499107 scopus 로고
    • Mechanism of the nucleotide exchange reaction in eukaryotic polypeptide chain initiation. Characterization of the guanine nucleotide exchange factor as a GTP-binding protein
    • Dholakia, J. N., and Wahba, A. J. (1989) Mechanism of the nucleotide exchange reaction in eukaryotic polypeptide chain initiation. Characterization of the guanine nucleotide exchange factor as a GTP-binding protein, J. Biol. Chem. 264, 546-550.
    • (1989) J. Biol. Chem. , vol.264 , pp. 546-550
    • Dholakia, J.N.1    Wahba, A.J.2
  • 43
    • 0031561419 scopus 로고    scopus 로고
    • Catalysis of guanine nucleotide exchange on eIF-2 by eIF-2B: Is it a sequential or substituted enzyme mechanism?
    • Manchester, K. L. (1997) Catalysis of guanine nucleotide exchange on eIF-2 by eIF-2B: is it a sequential or substituted enzyme mechanism? Biochem. Biophys. Res. Commun. 239, 223-227.
    • (1997) Biochem. Biophys. Res. Commun. , vol.239 , pp. 223-227
    • Manchester, K.L.1
  • 44
    • 0032748576 scopus 로고    scopus 로고
    • Biochemical analysis of SopE from Salmonella typhimurium, a highly efficient guanosine nucleotide exchange factor for RhoGTPases
    • Rudolph, M. G., Weise, C., Mirold, S., Hillenbrand, B., Bader, B., Wittinghofer, A., and Hardt, W. D. (1999) Biochemical analysis of SopE from Salmonella typhimurium, a highly efficient guanosine nucleotide exchange factor for RhoGTPases, J. Biol. Chem. 274, 30501-30509.
    • (1999) J. Biol. Chem. , vol.274 , pp. 30501-30509
    • Rudolph, M.G.1    Weise, C.2    Mirold, S.3    Hillenbrand, B.4    Bader, B.5    Wittinghofer, A.6    Hardt, W.D.7
  • 45
    • 0028365073 scopus 로고
    • Cdc25p, the guanine nucleotide exchange factor for the Ras proteins of Saccharomyces cerevisiae, promotes exchange by stabilizing Ras in a nucleotide-free state
    • Haney, S. A., and Broach, J. R. (1994) Cdc25p, the guanine nucleotide exchange factor for the Ras proteins of Saccharomyces cerevisiae, promotes exchange by stabilizing Ras in a nucleotide-free state, J. Biol. Chem. 269, 16541-16548.
    • (1994) J. Biol. Chem. , vol.269 , pp. 16541-16548
    • Haney, S.A.1    Broach, J.R.2
  • 46
    • 0035937768 scopus 로고    scopus 로고
    • Oligomerization of Rac1 GTPase mediated by the carboxyl-terminal polybasic domain
    • Zhang, B., Gao, Y., Moon, S. Y., Zhang, Y., and Zheng, Y. (2001) Oligomerization of Rac1 GTPase mediated by the carboxyl-terminal polybasic domain, J. Biol. Chem. 276, 8958-8967.
    • (2001) J. Biol. Chem. , vol.276 , pp. 8958-8967
    • Zhang, B.1    Gao, Y.2    Moon, S.Y.3    Zhang, Y.4    Zheng, Y.5
  • 47
    • 0025740753 scopus 로고
    • The structure of Ras protein: A model for a universal molecular switch
    • Wittinghofer, A., and Pai, E. F. (1991) The structure of Ras protein: a model for a universal molecular switch, Trends Biochem. Sci. 16, 382-387.
    • (1991) Trends Biochem. Sci. , vol.16 , pp. 382-387
    • Wittinghofer, A.1    Pai, E.F.2
  • 48
    • 0022930104 scopus 로고
    • 2+ on the guanine nucleotide exchange rate of p21N-ras
    • 2+ on the guanine nucleotide exchange rate of p21N-ras, J. Biol. Chem. 261, 10963-10965.
    • (1986) J. Biol. Chem. , vol.261 , pp. 10963-10965
    • Hall, A.1    Self, A.J.2
  • 49
    • 0034682668 scopus 로고    scopus 로고
    • 2+ cofactor in the guanine nucleotide exchange and GTP hydrolysis reactions of Rho family GTP-binding proteins
    • 2+ cofactor in the guanine nucleotide exchange and GTP hydrolysis reactions of Rho family GTP-binding proteins, J. Biol. Chem. 275, 25299-25307.
    • (2000) J. Biol. Chem. , vol.275 , pp. 25299-25307
    • Zhang, B.1    Zhang, Y.2    Wang, Z.3    Zheng, Y.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.