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Volumn 43, Issue 2, 2005, Pages 696-702

Duplex reverse transcription-PCR followed by nested PCR assays for detection and identification of Brazilian alphaviruses and flaviviruses

Author keywords

[No Author keywords available]

Indexed keywords

ALPHA VIRUS; ANALYTIC METHOD; ANIMAL CELL; ANIMAL TISSUE; ARBOVIRUS; ARTICLE; AURA VIRUS; BRAZIL; BUSSUQUARA FLAVIVIRUS; CONTROLLED STUDY; DENGUE VIRUS; DIAGNOSTIC TEST; DIFFERENTIAL DIAGNOSIS; EASTERN EQUINE ENCEPHALOMYELITIS VIRUS; FLAVIVIRUS; HUMAN; ILHEUS VIRUS; MAYARO ALPHAVIRUS; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; ROCIO VIRUS; SPECIES DIFFERENCE; ST LOUIS FLAVIVIRUS; VENEZUELAN EQUINE ENCEPHALOMYELITIS ALPHAVIRUS; VIRUS CULTURE; VIRUS DETECTION; VIRUS IDENTIFICATION; VIRUS INFECTION; VIRUS STRAIN; WESTERN EQUINE ENCEPHALOMYELITIS ALPHAVIRUS; YELLOW FEVER FLAVIVIRUS;

EID: 13844256120     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.43.2.696-702.2005     Document Type: Article
Times cited : (142)

References (39)
  • 1
    • 13844304914 scopus 로고
    • Infecção humana pelo vírus leste de encefalite eqüina
    • Bahia
    • Alice, F. J. 1956. Infecção humana pelo vírus leste de encefalite eqüina. Bol. Inst. Biol. (Bahia) 3:3-9.
    • (1956) Bol. Inst. Biol. , vol.3 , pp. 3-9
    • Alice, F.J.1
  • 3
    • 0031982294 scopus 로고    scopus 로고
    • Genetic targets for the detection and identification of Venezuelan equine encephalitis viruses
    • Brightwell, G., J. M. Brown, and D. M. Coates. 1998. Genetic targets for the detection and identification of Venezuelan equine encephalitis viruses. Arch. Virol. 143:731-742.
    • (1998) Arch. Virol. , vol.143 , pp. 731-742
    • Brightwell, G.1    Brown, J.M.2    Coates, D.M.3
  • 5
    • 0027358064 scopus 로고
    • Use of NS3 consensus primers for the polymerase chain reaction amplification and sequencing of dengue viruses and other flaviviruses
    • Chow, V. T. K., C. L. K. Seah, and Y. C. Chan. 1993. Use of NS3 consensus primers for the polymerase chain reaction amplification and sequencing of dengue viruses and other flaviviruses. Arch. Virol. 133:157-170.
    • (1993) Arch. Virol. , vol.133 , pp. 157-170
    • Chow, V.T.K.1    Seah, C.L.K.2    Chan, Y.C.3
  • 6
    • 0034813923 scopus 로고    scopus 로고
    • Comparison of techniques for extracting viral RNA from isolation-negative serum for dengue diagnosis by the polymerase chain reaction
    • De Paula, S. O., C. Nunes, R. Matos, Z. M. Oliveira, D. M. Lima, and B. A. L. Fonseca. 2001. Comparison of techniques for extracting viral RNA from isolation-negative serum for dengue diagnosis by the polymerase chain reaction. J. Virol. Methods 98:119-125.
    • (2001) J. Virol. Methods , vol.98 , pp. 119-125
    • De Paula, S.O.1    Nunes, C.2    Matos, R.3    Oliveira, Z.M.4    Lima, D.M.5    Fonseca, B.A.L.6
  • 7
    • 0036198584 scopus 로고    scopus 로고
    • Detection and identification of dengue-1 virus in clinical samples by a nested-PCR followed by restriction enzyme digestion of amplicons
    • De Paula, S. O., D. M. Lima, and B. A. L. Fonseca. 2002. Detection and identification of dengue-1 virus in clinical samples by a nested-PCR followed by restriction enzyme digestion of amplicons. J. Med. Virol. 66:529-534.
    • (2002) J. Med. Virol. , vol.66 , pp. 529-534
    • De Paula, S.O.1    Lima, D.M.2    Fonseca, B.A.L.3
  • 8
    • 0025000308 scopus 로고
    • Identification of dengue sequences by genomic amplification: Rapid diagnosis of dengue virus serotypes in peripheral blood
    • Deubel, V., M. Laille, J. P. Hugnot, E. Chungue, J. L. Guesdom, M. T. Drouet, S. Bassot, and D. Chevrier. 1990. Identification of dengue sequences by genomic amplification: rapid diagnosis of dengue virus serotypes in peripheral blood. J. Virol. Methods 30:41-54.
    • (1990) J. Virol. Methods , vol.30 , pp. 41-54
    • Deubel, V.1    Laille, M.2    Hugnot, J.P.3    Chungue, E.4    Guesdom, J.L.5    Drouet, M.T.6    Bassot, S.7    Chevrier, D.8
  • 9
    • 0031428909 scopus 로고    scopus 로고
    • Molecular detection and characterization of yellow fever virus in blood and liver specimens of a non-vaccinated fatal human case
    • Deubel, V., M. Huerre, G. Cathomas, M. T. Drouet, N. Wuscher, B. Le-Guenno, and A. F. Widmer. 1997. Molecular detection and characterization of yellow fever virus in blood and liver specimens of a non-vaccinated fatal human case. J. Med. Virol. 53:212-217.
    • (1997) J. Med. Virol. , vol.53 , pp. 212-217
    • Deubel, V.1    Huerre, M.2    Cathomas, G.3    Drouet, M.T.4    Wuscher, N.5    Le-Guenno, B.6    Widmer, A.F.7
  • 11
    • 0025648669 scopus 로고
    • Uso de células de Aedes albopictus C6/36 na propagaçã o e classificação de arbovírus das famílias Togaviridae, Bunyaviridae, Flaviviridae e Rhabdoviridae
    • Figueiredo, L. T. M. 1990. Uso de células de Aedes albopictus C6/36 na propagação e classificação de arbovírus das famílias Togaviridae, Bunyaviridae, Flaviviridae e Rhabdoviridae. Rev. Soc. Bras. Med. Trop. 23:13-18.
    • (1990) Rev. Soc. Bras. Med. Trop. , vol.23 , pp. 13-18
    • Figueiredo, L.T.M.1
  • 12
    • 0031083428 scopus 로고    scopus 로고
    • Detection and identification of dengue virus isolates from Brazil by a simplified reverse transcription-polymerase chain reaction (RT-PCR) method
    • São Paulo
    • Figueiredo, L. T. M., W. C. Batista, and A. Igarashi. 1997. Detection and identification of dengue virus isolates from Brazil by a simplified reverse transcription-polymerase chain reaction (RT-PCR) method. Rev. Inst. Med. Trop. (São Paulo) 39:95-99.
    • (1997) Rev. Inst. Med. Trop. , vol.39 , pp. 95-99
    • Figueiredo, L.T.M.1    Batista, W.C.2    Igarashi, A.3
  • 13
    • 0031129318 scopus 로고    scopus 로고
    • A simple reverse transcription-polymerase chain reaction for dengue type 2 virus identification
    • Figueiredo, L. T. M., W. C. Batista, and A. Igarashi. 1997. A simple reverse transcription-polymerase chain reaction for dengue type 2 virus identification. Mem. Inst. Oswaldo Cruz 92:395-398.
    • (1997) Mem. Inst. Oswaldo Cruz , vol.92 , pp. 395-398
    • Figueiredo, L.T.M.1    Batista, W.C.2    Igarashi, A.3
  • 14
    • 0031713780 scopus 로고    scopus 로고
    • Identification of Brazilian flaviviruses by a simplified reverse transcription-polymerase chain reaction method using Flavivirus universal primers
    • Figueiredo, L. T. M., W. C. Batista, S. Kashima, and E. S. Nassar. 1998. Identification of Brazilian flaviviruses by a simplified reverse transcription-polymerase chain reaction method using Flavivirus universal primers. Am. J. Trop. Med. Hyg. 59:357-362.
    • (1998) Am. J. Trop. Med. Hyg. , vol.59 , pp. 357-362
    • Figueiredo, L.T.M.1    Batista, W.C.2    Kashima, S.3    Nassar, E.S.4
  • 15
    • 0033724668 scopus 로고    scopus 로고
    • The Brazilian flaviviruses
    • Figueiredo, L. T. M. 2000. The Brazilian flaviviruses. Microbes Infect. 2:1-7.
    • (2000) Microbes Infect. , vol.2 , pp. 1-7
    • Figueiredo, L.T.M.1
  • 16
    • 0036883649 scopus 로고    scopus 로고
    • Outbreak of jaundice and hemorrhagic fever in the southeast of Brazil in 2001: Detection and molecular characterization of yellow fever virus
    • Filippis, A. M. B., R. M. R. Nogueira, H. G. Schatzmayr, D. S. Tavares, A. V. Jabor, and S. C. M. Diniz. 2002. Outbreak of jaundice and hemorrhagic fever in the southeast of Brazil in 2001: detection and molecular characterization of yellow fever virus. J. Med. Virol. 68:620-627.
    • (2002) J. Med. Virol. , vol.68 , pp. 620-627
    • Filippis, A.M.B.1    Nogueira, R.M.R.2    Schatzmayr, H.G.3    Tavares, D.S.4    Jabor, A.V.5    Diniz, S.C.M.6
  • 18
  • 20
    • 0027290716 scopus 로고
    • Detection of Ockelbo virus RNA in skin biopses by polymerase chain reaction
    • Hörling, J., S. Vene, C. Franzén, and B. Niklasson. 1993. Detection of Ockelbo virus RNA in skin biopses by polymerase chain reaction. J. Clin. Microbiol. 31:2004-2009.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 2004-2009
    • Hörling, J.1    Vene, S.2    Franzén, C.3    Niklasson, B.4
  • 21
    • 0026512586 scopus 로고
    • Use of the polymerase chain reaction of the sensitive detection of St. Louis encephalitis viral RNA
    • Howe, D. K., M. H. Vodkin, R. J. Novak, R. E. Shope, and G. L. Mclaughlin. 1992. Use of the polymerase chain reaction of the sensitive detection of St. Louis encephalitis viral RNA. J. Virol. Methods 36:101-110.
    • (1992) J. Virol. Methods , vol.36 , pp. 101-110
    • Howe, D.K.1    Vodkin, M.H.2    Novak, R.J.3    Shope, R.E.4    Mclaughlin, G.L.5
  • 22
    • 0031838119 scopus 로고    scopus 로고
    • Universal diagnostic RT-PCR protocol for arboviroses
    • Kuno, G. 1998. Universal diagnostic RT-PCR protocol for arboviroses. J. Virol. Methods 72:27-41.
    • (1998) J. Virol. Methods , vol.72 , pp. 27-41
    • Kuno, G.1
  • 23
    • 0026580422 scopus 로고
    • Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction
    • Lanciotti, R. S., C. H. Calisher, D. J. Gubler, G. L. Chang, and V. Vorndam. 1992. Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction. J. Clin. Microbiol. 30:545-551.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 545-551
    • Lanciotti, R.S.1    Calisher, C.H.2    Gubler, D.J.3    Chang, G.L.4    Vorndam, V.5
  • 24
    • 0036512139 scopus 로고    scopus 로고
    • Simultaneous detection of three mosquito-borne encephalitis viruses (Eastern equine, la Crosse, and St. Louis) with a single-tube multiplex reverse transcriptase polymerase chain reaction assay
    • Lee, J. H., K. Tennessen, B. G. Lilley, and T. R. Unnasch. 2002. Simultaneous detection of three mosquito-borne encephalitis viruses (Eastern equine, La Crosse, and St. Louis) with a single-tube multiplex reverse transcriptase polymerase chain reaction assay. J. Am. Mosq. Control Assoc. 18:26-31.
    • (2002) J. Am. Mosq. Control Assoc. , vol.18 , pp. 26-31
    • Lee, J.H.1    Tennessen, K.2    Lilley, B.G.3    Unnasch, T.R.4
  • 28
    • 0030139415 scopus 로고    scopus 로고
    • Evaluation of reverse transcriptase polymerase chain reaction for the detection of Eastern equine encephalomyelitis virus during vector surveillance
    • Monroy, A. M., T. W. Scott, and B. A. Webb. 1996. Evaluation of reverse transcriptase polymerase chain reaction for the detection of Eastern equine encephalomyelitis virus during vector surveillance. J. Med. Entomol. 33:449-457.
    • (1996) J. Med. Entomol. , vol.33 , pp. 449-457
    • Monroy, A.M.1    Scott, T.W.2    Webb, B.A.3
  • 29
    • 0031461179 scopus 로고    scopus 로고
    • Genus-specific detection of alphaviruses by semi-nested reverse transcription-polymerase chain reaction
    • Pfeffer, M., B. Proebster, R. M. Kinney, and O. R. Kaaden. 1997. Genus-specific detection of alphaviruses by semi-nested reverse transcription-polymerase chain reaction. Am. J. Trop. Med. Hyg. 57:709-718.
    • (1997) Am. J. Trop. Med. Hyg. , vol.57 , pp. 709-718
    • Pfeffer, M.1    Proebster, B.2    Kinney, R.M.3    Kaaden, O.R.4
  • 30
    • 0028265364 scopus 로고
    • Identification of mosquito-borne flavivirus sequences using universal primers and reverse transcription/ polymerase chain reaction
    • Pierre, V., M. T. Drouet, and V. Deubel. 1994. Identification of mosquito-borne flavivirus sequences using universal primers and reverse transcription/ polymerase chain reaction. Res. Virol. 145:93-104.
    • (1994) Res. Virol. , vol.145 , pp. 93-104
    • Pierre, V.1    Drouet, M.T.2    Deubel, V.3
  • 31
    • 0034997771 scopus 로고    scopus 로고
    • A generic nested-RT-PCR followed by sequencing for detection and identification of members of the alphavirus genus
    • Sánchez-Seco, M. P., D. Rosario, E. Quiroz, G. Guzmán, and A. Tenório. 2001. A generic nested-RT-PCR followed by sequencing for detection and identification of members of the alphavirus genus. J. Virol. Methods 95:153-161.
    • (2001) J. Virol. Methods , vol.95 , pp. 153-161
    • Sánchez-Seco, M.P.1    Rosario, D.2    Quiroz, E.3    Guzmán, G.4    Tenório, A.5
  • 32
    • 0035021876 scopus 로고    scopus 로고
    • Comparison of Flavivirus universal primer pairs and development of a rapid, highly sensitive heminested reverse transcription-PCR assay for detection of flaviviruses targeted to a conserved region of the NS5 gene sequences
    • Scaramozzino, N., J. M. Crance, A. Jouan, D. A. Debriel, F. Stoll, and D. Garin. 2001. Comparison of Flavivirus universal primer pairs and development of a rapid, highly sensitive heminested reverse transcription-PCR assay for detection of flaviviruses targeted to a conserved region of the NS5 gene sequences. J. Clin. Microbiol. 39:1922-1927.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 1922-1927
    • Scaramozzino, N.1    Crance, J.M.2    Jouan, A.3    Debriel, D.A.4    Stoll, F.5    Garin, D.6
  • 33
    • 0028170636 scopus 로고
    • Sensitive detection of Ross river virus - A one-tube nested RT-PCR
    • Sellner, L. N., R. J. Coelen, and J. S. Mackenzie. 1994. Sensitive detection of Ross river virus - a one-tube nested RT-PCR. J. Virol. Methods 49:47-58.
    • (1994) J. Virol. Methods , vol.49 , pp. 47-58
    • Sellner, L.N.1    Coelen, R.J.2    Mackenzie, J.S.3
  • 36
    • 0027526229 scopus 로고
    • Rapid identification of Flavivirus using the polymerase chain reaction
    • Tanaka, M. 1993. Rapid identification of Flavivirus using the polymerase chain reaction. J. Virol. Methods 41:311-322.
    • (1993) J. Virol. Methods , vol.41 , pp. 311-322
    • Tanaka, M.1
  • 39
    • 0028307546 scopus 로고
    • PCR-based detection of arboviral RNA from mosquitoes homogenized in detergent
    • Vodkin, M. H., T. Streit, C. J. Mitchell, G. L. Mclaughlin, and R. J. Novak. 1994. PCR-based detection of arboviral RNA from mosquitoes homogenized in detergent. BioTechniques 17:114-116.
    • (1994) BioTechniques , vol.17 , pp. 114-116
    • Vodkin, M.H.1    Streit, T.2    Mitchell, C.J.3    Mclaughlin, G.L.4    Novak, R.J.5


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