Typing of dengue viruses in clinical specimens and mosquitoes by single- tube multiplex reverse transcriptase PCR

Journal of Clinical Microbiology

Volumn 36, Issue 9, 1998, Pages 2634-2639

  Harris, Eva ^a,d   Roberts, T Guy ^a   Smith, Leila ^a   Selle, John ^a   Kramer, Laura D ^b   Valle, Sonia ^c   Sandoval, Erick ^c   Balmaseda, Angel ^c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c Ministerio de Salud   (Nicaragua)

^d UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

RNA DIRECTED DNA POLYMERASE; VIRUS RNA;

AEDES AEGYPTI; ARTICLE; DENGUE VIRUS; NONHUMAN; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; VIRUS TYPING;

AEDES AEGYPTI; DENGUE VIRUS; DENGUE VIRUS GROUP; RNA VIRUSES;

EID: 0031850828     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/jcm.36.9.2634-2639.1998     Document Type: Article

References (34)

1. Belli, A., B. Rodriguez, H. Avilés, and E. Harris. 1998. Simplified PCR detection of New World Leishmania from clinical specimens. Am. J. Trop. Med. Hyg. 58:102-109.
2. Centers for Disease Control and Prevention. 1995. Dengue type 3 infection - Nicaragua and Panama, October-November, 1994. Morbid. Mortal. Weekly Rep. 44:21-24.
3. Centers for Disease Control and Prevention. 1995. Outbreak of acute febrile illness and pulmonary hemorrhage - Nicaragua, 1995. JAMA 274:1668.
4. Chan, S.-Y., I. M. Kautner, and S.-K. Lam. 1994. The influence of antibody levels in dengue diagnosis by polymerase chain reaction. J. Virol. Methods 49:315-322.
5. Chevet, E., G. Lemaitre, and M. D. Katinka. 1995. Low concentrations of tetramethylammonium chloride increase yield and specificity of PCR. Nucleic Acids Res. 23:3343-3344.
6. Chow, V. T. K., Y. C. Chan, R. Yong, K. M. Lee, L. K. Lim, Y. K. Chung, S. G. Lam-Phua, and B. T. Tan. 1998. Monitoring of dengue viruses in field-caught Aedes aegypti and Aedes albopictus mosquitoes by a type-specific polymerase chain reaction and cycle sequencing. Am. J. Trop. Med. Hyg. 58:578-586.
7. Chungue, E., C. Roche, M.-F. Lefevre, P. Barbazan, and S. Chanteau. 1993. Ultra-rapid, simple, sensitive, and economical silica method for extraction of dengue viral RNA from clinical specimens and mosquitoes by reverse transcriptase-polymerase chain reaction. J. Med. Virol. 40:142-145.
8. Deubel, V., M. Laille, J. P. Hugnot, E. Chungue, J. L. Guesdon, M. T. Drouet, S. Bassot, and D. Chevrier. 1990. Identification of dengue sequences by genomic amplification: rapid diagnosis of dengue virus serotypes in peripheral blood. J. Virol. Methods 30:41-54.
9. Gubler, D. J., and G. G. Clark. 1995. Dengue/dengue hemorrhagic fever: the emergence of a global health problem. Emerg. Infect. Dis. 1:55-57.
10. Gubler, D. J., and D. W. Trent. 1994. Emergence of epidemic dengue/dengue hemorrhagic fever as a public health problem in the Americas. Infect. Agents Dis. 2:383-393.
11. Halstead, S. B. 1988. Pathogenesis of dengue: challenges to molecular biology. Science 239:476-481.
12. Harris, E. 1996. Developing essential scientific capability in countries with limited resources. Nat. Med. 2:737-739.
13. Harris, E. A low-cost approach to PCR: appropriate transfer of biomolecular techniques, in press. Oxford University Press, New York, N.Y.
14. Harris, E., M. López, J. Arévalo, J. Bellatin, A. Belli, J. Moran, and O. Orrego. 1993. Short courses on DNA detection and amplification in Central and South America: the democratization of molecular biology. Biochem. Educ. 21:16-22.
15. Henchal, E., S. Polo, V. Vorndam, C. Yaemsiri, B. Innis, and C. Hoke. 1991. Sensitivity and specificity of a universal primer set for the rapid diagnosis of dengue virus infections by polymerase chain reaction and nucleic acid hybridization. Am. J. Trop. Med. Hyg. 45:418-428.
16. Igarashi, A. 1985. Mosquito cell cultures and the study of arthropod-borne togaviruses. Adv. Virus Res. 30:21-39.
17. Kouri, G., M. Valdez, L. Arguello, M. G. Guzman, L. Valdes, M. Soler, and J. Bravo. 1991. Dengue epidemic in Nicaragua, 1985. Rev. Inst. Med. Trop. São Paulo 33:365-371.
18. Lanciotti, R., C. Calisher, D. Gubler, G. Chang, and V. Vorndam. 1992. Rapid detection and typing of dengue viruses from clinical samples by using reverse transcriptase-polymerase chain reaction. J. Clin. Microbiol. 30:545-551.
19. MacPherson, I. A., and M. G. P. Stoker. 1962. Polyoma transformation of hamster cells - an investigation of genetic factors affecting cell competence. Virology 16:147-151.
20. Meiyu, F., C. Huosheng, C. Cuihua, T. Xiaodong, J. Lianhua, P. Yifei, C. Weijun, and G. Huiyu. 1997. Detection of flaviviruses by reverse transcriptase-polymerase chain reaction with the universal primer set. Microbiol. Immunol. 41:209-213.
21. Moleon-Borodowsky, I., and L. E. Plaza. Personal communication.
22. Monath, T. P., and F. X. Heinz. 1996. Flaviviruses, p. 961-1034. In B. N. Fields, D. M. Knipe, P. M. Howley, et al. (ed.), Fields virology. Lippincott-Raven Publishers, Philadelphia, Pa.
23. Morens, D. M. 1994. Antibody-dependent enhancement of infection and the pathogenesis of viral disease. Clin. Infect. Dis. 19:500-512.
24. Monta, K., M. Tanaka, and A. Igarashi. 1991. Rapid identification of dengue virus serotypes by using polymerase chain reaction. J. Clin. Microbiol. 29:2107-2110.
25. Mytelka, D. S., and M. J. Chamberlin. 1996. Analysis and suppression of DNA polymerase pauses associated with a trinucleotide consensus. Nucleic Acids Res. 24:2774-2781.
26. Pao, C., D.-S. Yao, C.-Y. Lin, and C.-C. King. 1992. Amplification of viral RNA for the detection of dengue types 1 and 2 virus. J. Infect. 24:23-29.
27. Peredo, C., T. Garron, J. L. Pellegrino, E. Harris, and A. Gianella. Detection and identification of dengue 2 virus from Santa Cruz. Bolivia, by a one-step RT-PCR method. Submitted for publication.
28. Pierre, V., M.-T. Drouet, and V. Deubel. 1994. Identification of mosquito-borne flavivirus sequences using universal primers and reverse transcriptase/ polymerase chain reaction. Res. Virol. 145:93-104.
29. Rosen, L., and D. Gubler. 1974. The use of mosquitoes to detect and propaeate dengue viruses. Am. J. Trop. Med. Hyg. 23:1153-1160.
30. Seah, C. L. K., V. T. K. Chow, H. C. Tan, and Y. C. Chan. 1995. Rapid, single-step RT-PCR typing of dengue viruses using five NS3 gene primers. J. Virol. Methods 51:193-200.
31. Torres, O. Personal communication.
32. Vodkin, M. H., T. Streit, C. J. Mitchell, G. L. McLaughlin, and R. J. Novak. 1994. PCR-based detection of arboviral RNA from mosquitoes homogenized in detergent. BioTechniques 17:114-116.
33. Vogelstein, B., and D. Gillespie. 1979. Preparative and analytical purification of DNA from agarose. Proc. Natl. Acad. Sci. USA 76:615-619.
34. Yenchitsomanus, P. T., P. Sricharoen, I. Jaruthasana, S. N. Pattanakitsakul, S. Nitayaphan, J. Mongkolsapaya, and P. Malasit. 1996. Rapid detection and identification of dengue viruses by polymerase chain reaction (PCR). Southeast Asian J. Trop. Med. Public Health 27:228-236.