메뉴 건너뛰기




Volumn 21, Issue 3, 2005, Pages 314-324

Discovery of stable and significant binding motif pairs from PDB complexes and protein interaction datasets

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTIC METHOD; ARTICLE; BINDING SITE; COMPLEX FORMATION; CONTROLLED STUDY; EXPERIMENTATION; FREQUENCY ANALYSIS; MATHEMATICAL COMPUTING; MOLECULAR MODEL; MOLECULAR STABILITY; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DATA BANK; PROTEIN MODIFICATION; PROTEIN MOTIF; PROTEIN PROTEIN INTERACTION; RANDOMIZATION; SCIENTIFIC LITERATURE; SEQUENCE DATABASE; STATISTICAL SIGNIFICANCE; VALIDATION PROCESS;

EID: 13844250629     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/bti019     Document Type: Article
Times cited : (15)

References (21)
  • 2
    • 0031470058 scopus 로고    scopus 로고
    • Interchanges of spatially neighbouring residues in structurally conserved environments
    • Azarya-Sprinzak,E., Naor,D., Wolfson,H.J., and Nussinov,R. (1997) Interchanges of spatially neighbouring residues in structurally conserved environments. Protein Eng., 10, 1109-1122.
    • (1997) Protein Eng. , vol.10 , pp. 1109-1122
    • Azarya-Sprinzak, E.1    Naor, D.2    Wolfson, H.J.3    Nussinov, R.4
  • 3
    • 0021836845 scopus 로고
    • Strategies and applications of in vitro mutagenesis
    • Botstein,D. and Shortle,D. (1985) Strategies and applications of in vitro mutagenesis. Science, 229, 1193-1201.
    • (1985) Science , vol.229 , pp. 1193-1201
    • Botstein, D.1    Shortle, D.2
  • 4
    • 0035719951 scopus 로고    scopus 로고
    • Use of mutagenesis to probe IGF-binding protein structure/function relationships
    • Clemmons,D.R. (2001) Use of mutagenesis to probe IGF-binding protein structure/function relationships. Endocr. Rev., 22, 800-817.
    • (2001) Endocr. Rev. , vol.22 , pp. 800-817
    • Clemmons, D.R.1
  • 5
    • 0036799752 scopus 로고    scopus 로고
    • Inferring domain-domain interactions from protein-protein interactions
    • Deng,M., Mehta,S., Sun,F., and Chen,T. (2002) Inferring domain-domain interactions from protein-protein interactions. Genome Res., 12, 1540-1548.
    • (2002) Genome Res. , vol.12 , pp. 1540-1548
    • Deng, M.1    Mehta, S.2    Sun, F.3    Chen, T.4
  • 6
    • 0035152740 scopus 로고    scopus 로고
    • Gamma subunit of the AP-1 adaptor complex binds clathrin: Implications for cooperative binding in coated vesicle assembly
    • Doray,B. and Kornfeld,S. (2001) Gamma subunit of the AP-1 adaptor complex binds clathrin: implications for cooperative binding in coated vesicle assembly. Mol. Biol. Cell, 12, 1925-1935.
    • (2001) Mol. Biol. Cell , vol.12 , pp. 1925-1935
    • Doray, B.1    Kornfeld, S.2
  • 7
    • 0036122073 scopus 로고    scopus 로고
    • Prediction of protein-protein interaction sites in heterocomplexes with neural networks
    • Fariselli,P., Pazos,F., Valencia,A., and Casadio,R. (2002) Prediction of protein-protein interaction sites in heterocomplexes with neural networks. Eur. J. Biochem., 269, 1356-1361.
    • (2002) Eur. J. Biochem. , vol.269 , pp. 1356-1361
    • Fariselli, P.1    Pazos, F.2    Valencia, A.3    Casadio, R.4
  • 8
    • 0034897552 scopus 로고    scopus 로고
    • Crystal structure of the IL-10/IL-10R1 complex reveals a shared receptor binding site
    • Josephson,K., Logsdon,N.J. and Walter,M.R. (2001) Crystal structure of the IL-10/IL-10R1 complex reveals a shared receptor binding site. Immunity, 15, 35-46.
    • (2001) Immunity , vol.15 , pp. 35-46
    • Josephson, K.1    Logsdon, N.J.2    Walter, M.R.3
  • 9
    • 2442704465 scopus 로고    scopus 로고
    • Discovery of binding motif pairs from protein complex structural data and protein interaction sequence data
    • Hawaii
    • Li,H., Li,J., Tan,S.H. and Ng,S.K. (2004) Discovery of binding motif pairs from protein complex structural data and protein interaction sequence data. In Proceedings of the Ninth Pacific Symposium on Biocomputing (PSB), Hawaii, pp. 312-323.
    • (2004) Proceedings of the Ninth Pacific Symposium on Biocomputing (PSB) , pp. 312-323
    • Li, H.1    Li, J.2    Tan, S.H.3    Ng, S.K.4
  • 10
    • 0346463267 scopus 로고    scopus 로고
    • Twelve C2H2 zinc finger genes on human chromosome 19 can be each translated into the same type of protein after frameshifts
    • Meng,S.W., Zhang,Z. and Li,J. (2004) Twelve C2H2 zinc finger genes on human chromosome 19 can be each translated into the same type of protein after frameshifts. Bioinformatics, 20, 1-4.
    • (2004) Bioinformatics , vol.20 , pp. 1-4
    • Meng, S.W.1    Zhang, Z.2    Li, J.3
  • 13
    • 0038620469 scopus 로고    scopus 로고
    • Integrative approach for computationally inferring protein-domain interactions
    • Ng,S.K., Zhang,Z. and Tan,S.H. (2003) Integrative approach for computationally inferring protein-domain interactions. Bioinformatics, 19, 923-929.
    • (2003) Bioinformatics , vol.19 , pp. 923-929
    • Ng, S.K.1    Zhang, Z.2    Tan, S.H.3
  • 16
    • 0037415014 scopus 로고    scopus 로고
    • Exploring protein-protein interactions with phage display
    • Sidhu,S.S., Fairbrother,W.J. and Deshayes,K. (2003) Exploring protein-protein interactions with phage display. Chembiochem., 4 14-25.
    • (2003) Chembiochem. , vol.4 , pp. 14-25
    • Sidhu, S.S.1    Fairbrother, W.J.2    Deshayes, K.3
  • 17
    • 0021818675 scopus 로고
    • Filamentous fusion phage: Novel expression vectors that display cloned antigens on the virion surface
    • Smith,G. (1985) Filamentous fusion phage: novel expression vectors that display cloned antigens on the virion surface. Science 228, 1315-1317.
    • (1985) Science , vol.228 , pp. 1315-1317
    • Smith, G.1
  • 18
    • 0035943340 scopus 로고    scopus 로고
    • Correlated sequence-signatures as markers of protein-protein interaction
    • Sprinzak,E. and Margalit,H. (2001) Correlated sequence-signatures as markers of protein-protein interaction. J. Mol. Biol., 311, 681-692.
    • (2001) J. Mol. Biol. , vol.311 , pp. 681-692
    • Sprinzak, E.1    Margalit, H.2
  • 21
    • 0037161731 scopus 로고    scopus 로고
    • Comparative assessment of large-scale data sets of protein-protein interactions
    • von Mering,C., Krause,R. and Snel,B., Cornell,M., Oliver,S.G., Fields,S. and Bork,P. (2002) Comparative assessment of large-scale data sets of protein-protein interactions. Nature, 417, 399-403.
    • (2002) Nature , vol.417 , pp. 399-403
    • von Mering, C.1    Krause, R.2    Snel, B.3    Cornell, M.4    Oliver, S.G.5    Fields, S.6    Bork, P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.