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Volumn 79, Issue 3, 2005, Pages 1836-1841

Evidence for heterogeneous selective pressures in the evolution of the env gene in different human immunodeficiency virus type 1 subtypes

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; GLYCOPROTEIN GP 120; VIRUS GLYCOPROTEIN; GLYCOPROTEIN GP 41; VIRUS ENVELOPE PROTEIN;

EID: 13744254693     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.79.3.1836-1841.2005     Document Type: Article
Times cited : (33)

References (34)
  • 4
    • 0842326022 scopus 로고    scopus 로고
    • Comparative study of adaptive molecular evolution in different human immunodeficiency virus groups and subtypes
    • Choisy, M., C. H. Woelk, J. F. Guegan, and D. L. Robertson. 2004. Comparative study of adaptive molecular evolution in different human immunodeficiency virus groups and subtypes. J. Virol. 78:1962-1970.
    • (2004) J. Virol , vol.78 , pp. 1962-1970
    • Choisy, M.1    Woelk, C.H.2    Guegan, J.F.3    Robertson, D.L.4
  • 5
    • 0032543744 scopus 로고    scopus 로고
    • Naturally occurring decreased susceptibility of HIV-1 subtype G to protease inhibitors
    • Descamps, D., C. Apetrei, G. Collin, F. Damond, F. Simon, and F. Brun-Vezinet. 1998. Naturally occurring decreased susceptibility of HIV-1 subtype G to protease inhibitors. AIDS 12:1109-1111.
    • (1998) AIDS , vol.12 , pp. 1109-1111
    • Descamps, D.1    Apetrei, C.2    Collin, G.3    Damond, F.4    Simon, F.5    Brun-Vezinet, F.6
  • 6
    • 0345884909 scopus 로고    scopus 로고
    • Inference of viral evolutionary rates from molecular sequences
    • Drummond, A., O. G. Pybus, and A. Rambaut. 2003. Inference of viral evolutionary rates from molecular sequences. Adv. Parasitol. 54:331-358.
    • (2003) Adv. Parasitol , vol.54 , pp. 331-358
    • Drummond, A.1    Pybus, O.G.2    Rambaut, A.3
  • 7
    • 0034631503 scopus 로고    scopus 로고
    • Accelerating the development and future availability of HIV-1 vaccines: Why, when, where, and how?
    • Esparza, J., and N. Bhamarapravati. 2000. Accelerating the development and future availability of HIV-1 vaccines: why, when, where, and how? Lancet 355:2061-2066.
    • (2000) Lancet , vol.355 , pp. 2061-2066
    • Esparza, J.1    Bhamarapravati, N.2
  • 8
    • 8844245563 scopus 로고    scopus 로고
    • SWAPSC: Sliding window analysis procedure to detect selective constraints
    • Fares, M. A. 2004. SWAPSC: sliding window analysis procedure to detect selective constraints. Bioinformatics 20:2867-2868.
    • (2004) Bioinformatics , vol.20 , pp. 2867-2868
    • Fares, M.A.1
  • 10
    • 0016197604 scopus 로고
    • Amino acid difference formula to help explain protein evolution
    • Grantham, R. 1974. Amino acid difference formula to help explain protein evolution. Science 185:862-864.
    • (1974) Science , vol.185 , pp. 862-864
    • Grantham, R.1
  • 11
    • 0032543307 scopus 로고    scopus 로고
    • Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody
    • Kwong, P. D., R. Wyatt, J. Robinson, R. W. Sweet, J. Sodroski, and W. A. Hendrickson. 1998. Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody. Nature 393:648-659.
    • (1998) Nature , vol.393 , pp. 648-659
    • Kwong, P.D.1    Wyatt, R.2    Robinson, J.3    Sweet, R.W.4    Sodroski, J.5    Hendrickson, W.A.6
  • 13
    • 0028073184 scopus 로고
    • Exploration of antigenic variation in gp120 from clades A through F of human immunodeficiency virus type 1 by using monoclonal antibodies
    • Moore, J. P., F. E. McCutchan, S. W. Poon, J. Mascola, J. Liu, Y. Cao, and D. D. Ho. 1994. Exploration of antigenic variation in gp120 from clades A through F of human immunodeficiency virus type 1 by using monoclonal antibodies. J. Virol. 68:8350-8364.
    • (1994) J. Virol , vol.68 , pp. 8350-8364
    • Moore, J.P.1    McCutchan, F.E.2    Poon, S.W.3    Mascola, J.4    Liu, J.5    Cao, Y.6    Ho, D.D.7
  • 15
    • 0033769416 scopus 로고    scopus 로고
    • Genetic diversity of HIV-1: The moving target
    • Peeters, M., and P. M. Sharp. 2000. Genetic diversity of HIV-1: the moving target. AIDS 14(Suppl. 3):S129-S140.
    • (2000) AIDS , vol.14 , Issue.SUPPL. 3
    • Peeters, M.1    Sharp, P.M.2
  • 16
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada, D., and K. A. Crandall. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 20
    • 0036234481 scopus 로고    scopus 로고
    • Estimation of effective population size of HIV-1 within a host: A pseudomaximum-likelihood approach
    • Seo, T. K., J. L. Thorne, M. Hasegawa, and H. Kishino. 2002. Estimation of effective population size of HIV-1 within a host: a pseudomaximum-likelihood approach. Genetics 160:1283-1293.
    • (2002) Genetics , vol.160 , pp. 1283-1293
    • Seo, T.K.1    Thorne, J.L.2    Hasegawa, M.3    Kishino, H.4
  • 21
    • 0034796179 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 env sequences from Calcutta in eastern India: Identification of features that distinguish subtype C sequences in India from other subtype C sequences
    • Shankarappa, R., R. Chatterjee, G. H. Learn, D. Neogi, M. Ding, P. Roy, A. Ghosh, L. Kingsley, L. Harrison, J. I. Mullins, and P. Gupla. 2001. Human immunodeficiency virus type 1 env sequences from Calcutta in eastern India: identification of features that distinguish subtype C sequences in India from other subtype C sequences. J. Virol. 75:10479-10487.
    • (2001) J. Virol , vol.75 , pp. 10479-10487
    • Shankarappa, R.1    Chatterjee, R.2    Learn, G.H.3    Neogi, D.4    Ding, M.5    Roy, P.6    Ghosh, A.7    Kingsley, L.8    Harrison, L.9    Mullins, J.I.10    Gupla, P.11
  • 27
    • 0033995286 scopus 로고    scopus 로고
    • Reevaluation of amino acid variability of the human immunodeficiency virus type 1 gp120 envelope glycoprotein and prediction of new discontinuous epitopes
    • Yamaguchi-Kabata, Y., and T. Gojobori. 2000. Reevaluation of amino acid variability of the human immunodeficiency virus type 1 gp120 envelope glycoprotein and prediction of new discontinuous epitopes. J. Virol. 74: 4335-4350.
    • (2000) J. Virol , vol.74 , pp. 4335-4350
    • Yamaguchi-Kabata, Y.1    Gojobori, T.2
  • 28
    • 0041884768 scopus 로고    scopus 로고
    • Widespread adaptive evolution in the human immunodeficiency virus type 1 genome
    • Yang, W., J. P. Bielawski, and Z. Yang. 2003. Widespread adaptive evolution in the human immunodeficiency virus type 1 genome. J. Mol. Evol. 57: 212-221.
    • (2003) J. Mol. Evol , vol.57 , pp. 212-221
    • Yang, W.1    Bielawski, J.P.2    Yang, Z.3
  • 29
    • 0035221557 scopus 로고    scopus 로고
    • Maximum likelihood analysis of adaptive evolution in HIV-1 gp120 env gene
    • Yang, Z. 2001. Maximum likelihood analysis of adaptive evolution in HIV-1 gp120 env gene. Pac. Symp. Biocomput. 2001:226-237.
    • (2001) Pac. Symp. Biocomput , vol.2001 , pp. 226-237
    • Yang, Z.1
  • 30
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13:555-556.
    • (1997) Comput. Appl. Biosci , vol.13 , pp. 555-556
    • Yang, Z.1
  • 31
    • 0033639150 scopus 로고    scopus 로고
    • Statistical methods for detecting molecular adaptation
    • Yang, Z., and J. P. Bielawski. 2000. Statistical methods for detecting molecular adaptation. Trends Ecol. Evol. 15:496-503.
    • (2000) Trends Ecol. Evol , vol.15 , pp. 496-503
    • Yang, Z.1    Bielawski, J.P.2
  • 32
    • 0036270185 scopus 로고    scopus 로고
    • Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages
    • Yang, Z., and R. Nielsen. 2002. Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages. Mol. Biol. Evol. 19:908-917.
    • (2002) Mol. Biol. Evol , vol.19 , pp. 908-917
    • Yang, Z.1    Nielsen, R.2
  • 33
    • 0034097381 scopus 로고    scopus 로고
    • Codon-substitution models for heterogeneous selection pressure at amino acid sites
    • Yang, Z., R. Nielsen, N. Goldman, and A. M. Pedersen. 2000. Codon-substitution models for heterogeneous selection pressure at amino acid sites. Genetics 155:431-449.
    • (2000) Genetics , vol.155 , pp. 431-449
    • Yang, Z.1    Nielsen, R.2    Goldman, N.3    Pedersen, A.M.4
  • 34
    • 0036544871 scopus 로고    scopus 로고
    • Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey
    • Zhang, J., Y. P. Zhang, and H. F. Rosenberg. 2002. Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey. Nat. Genet. 30:411-415.
    • (2002) Nat. Genet , vol.30 , pp. 411-415
    • Zhang, J.1    Zhang, Y.P.2    Rosenberg, H.F.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.