Tyrosine B10 and heme-ligand interactions of Lucina pectinata hemoglobin II: Control of heme reactivity

Biochimica et Biophysica Acta - Proteins and Proteomics

Volumn 1747, Issue 2, 2005, Pages 195-203

  Pietri, Ruth ^a   Granell, Laura ^a   Cruz, Anthony ^a   De Jesús, Walleska ^a   Lewis, Ariel ^a   Leon, Ruth ^b   Cadilla, Carmen L ^b   Garriga, Juan López ^a  

^a UNIVERSITY OF PUERTO RICO   (Puerto Rico)

^b UNIVERSITY OF PUERTO RICO SCHOOL OF MEDICINE   (Puerto Rico)

Author keywords

Closed conformation; HbI PheB10Tyr mutant; Hemoglobin II; Lucina pectinata; Open conformation

Indexed keywords

HEMOGLOBIN;

ARTICLE; CHEMICAL INTERACTION; CONTROLLED STUDY; EQUILIBRIUM CONSTANT; GENE MUTATION; LIGAND BINDING; LUCINA PECTINATA; MOLLUSC; NONHUMAN; PH MEASUREMENT; PRIORITY JOURNAL; RAMAN SPECTROMETRY; TITRIMETRY;

LUCINA PECTINATA;

EID: 13544277171     PISSN: 15709639     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbapap.2004.11.005     Document Type: Article

References (37)

1. R.E. Weber, and S.N. Vinogradov Nonvertebrate hemoglobins: functions and molecular adaptations Physiol. Rev. 81 2001 569 628
2. D.W. Kraus, and J.B. Wittenberg Hemoglobins of the Lucina pectinata/bacteria symbiosis J. Biol. Chem. 265 1990 16043 16053
3. M. Rizzi, J.B. Wittenberg, A. Coda, M. Fasano, P. Ascenzi, and M. Bolognesi Structure of the sulfide-reactive hemoglobin from the clam Lucina pectinata J. Mol. Biol. 244 1994 86 99
4. F.M. Antommattei-Pérez, T. Rosado-Ruiz, C.L. Cadilla, and J. López-Garriga The cDNA-derived amino acid sequence of hemoglobin I from Lucina pectinata J. Protein Chem. 18 1999 831 836
5. J. Cerda, Y. Echevarría, E. Morales, and J. López-Garriga Resonance Raman studies of the heme-ligand active site of hemoglobin I from Lucina pectinata Biospectroscopy 5 1999 289 301
6. G.N. La Mar, B.D. Nguyen, Z. Xuefeng, and V. Krishnamurthi Solution and crystal structures of a sperm whale myoglobin triple mutant that mimics the sulfide-binding hemoglobin from Lucina pectinata J. Biol. Chem. 273 1998 9517 9526
7. E. Silfa, M. Almeida, J. Cerda, S. Wu, and J. López-Garriga Orientation of the heme vinyl groups in the hydrogen sulfide-binding hemoglobin I from Lucina pectinata Biospectroscopy 4 1998 311 326
8. J.F. Cerda-Colón, E. Silfa, and J. López-Garriga Unusual rocking freedom of the heme in the hydrogen sulfide-binding hemoglobin from Lucina pectinata J. Am. Chem. Soc. 120 1998 9312 9317
9. E. Torres-Mercado, J.Y. Renta, Y. Rodriguez, J. López-Garriga, and C.L. Cadilla The cDNA derived amino acid sequence of hemoglobin II from Lucina pectinata J. Protein Chem. 22 2003 683 690
10. U. Samuni, D. Dantsker, A. Ray, J.B. Wittenberg, B.A. Wittenberg, S. Dewilde, L. Moens, Y. Ouellet, M. Guertin, and J.M. Friedman Kinetic modulation in carbonmonoxy derivates of truncated hemoglobins J. Biol. Chem. 278 2003 27241 27250
11. H. Ouellet, L. Juszczak, D. Dantsker, U. Samuni, Y.H. Ouellet, P.-Y. Savard, J.B. Wittenberg, B.A. Wittenberg, J.M. Friedman, and M. Guertin Reactions of mycobacterium tuberculosis truncated hemoglobin O with ligands reveal a novel ligand-inclusive hydrogen bond network Biochemistry 42 2003 5764 5774
12. H. Ouellet, Y.H. Ouellet, C. Richard, M. Labarre, B.A. Wittenberg, J.B. Wittenberg, and M. Guertin Truncated hemoglobin HbN protects mycobacterium bovis from nitric oxide Proc. Natl. Acad. Sci. 99 2002 5902 5907
13. E.S. Peterson, S. Huang, J. Wang, L.M. Miller, G. Vidugiris, A.P. Kloek, D.E. Goldberg, M.R. Chance, J.B. Wittenberg, and J.M. Friedman A comparison of functional and structural consequences of the tyrosine B10 and glutamine E7 motifs in two invertebrate hemoglobins (Ascaris suum and Lucina pectinata) Biochemistry 36 1997 13110 13121
14. J.B. Wittenberg Functions of cytoplasmic hemoglobins and myohemerythrin Adv. Comp. Environ. Physiol. 13 1992 59 85
15. E. Collazo, R. Pietri, W. De Jesus, C. Ramos, A. Del Toro, R.G. León, J. López-Garriga, and C.L. Cadilla Functional characterization of the purified holo form of hemoglobin I from Lucina pectinata over-expressed in Escherichia coli Protein J. 23 2004 239 245
16. D.B. Howes, N.J. Rodriguez-López, and T.A. Smith Mutation of distal residues of horseradish peroxidase: influence on substrate binding and cavity properties Biochemistry 36 1997 1532 1543
17. C. Jung Insight into protein structure and protein-ligand recognition by Fourier transform infrared spectroscopy J. Mol. Recognit. 13 2000 325 351
18. D.W. Kraus, J.B. Wittenberg, L. Jing-Fen, and J. Peisach Hemoglobins of the Lucina pectinata/bacteria symbiosis J. Biol. Chem. 265 1990 16054 16059
19. M.A. Gilles-González, G. González, M.F. Perutz Ý, L. Kiger, M.C. Marden, and C. Poyart Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation Biochemistry 33 1994 8067 8073
20. A. Boffi, T. Kanti Das, S. della Longa, C. Spangnuolo, and D.L. Rousseau Pentacoordinate hemin derivates in sodium dodecyl sulfate micelles: model system for the assignment of the fifth ligand in ferric heme proteins J. Biophys. 77 1999 1143 1149
21. W. De Jesús-Bonilla, J.E. Cortés-Figueroa, F.A. Souto-Bachiller, L. Rodríguez, and J. López-Garriga Formation of compound I and compound II ferryl species in the reaction of hemoglobin I from Lucina pectinata with hydrogen peroxide Arch. Biochem. Biophys. 390 2001 304 308
22. B.J. Reeder, D.A. Svistunenko, M.A. Sharpe, and M.T. Wilson Characteristics and mechanism of formation of peroxide-induced heme to protein cross-linking in myoglobin Biochemistry 41 2002 367 375
23. 2-activated metmyoglobin and bovine serum albumin Free Radic. Res. 35 2001 757 766
24. R.P. Carey Biochemical Application of Raman and Resonance Raman Spectroscopy 1982 Academic Press
25. K.D. Sharma, L.A. Anderson, T.M. Loehr, J. Terner, and H.M. Goff Comparative spectral analysis of mammalian, fungal, and bacterial catalases J. Biol. Chem. 264 1989 12772 12779
26. A.E. Pond, M.P. Roach, M. Sono, A.H. Rux, S. Franzen, R. Hu, M.R. Thomas, A. Wilks, Y. Dou, M. Ikeda-Saito, P.R. Ortiz de Montellano, W.H. Woodruff, S.G. Boxer, and J.H. Dawson Assignment of the heme axial ligands for the ferric myoglobin (H93G) and heme oxygenase (H25A) cavity mutants as oxygen donors using magnetic circular dichroism Biochemistry 38 1999 7601 7608
27. T. Li, M.L. Quillin, G.N. Phillips, and J.S. Olson Structural determinants of the stretching frequency of CO bound to myoglobin Biochemistry 33 1994 1433 1446
28. A.M. Navarro, M. Maldonado, J. González-Lagoa, R. López-Mejía, J. López-Garriga, and J.L. Colón Control of carbon monoxide binding status and dynamics in hemoglobin I of Lucina pectinata by nearby aromatic residues Inorg. Chim. Acta 243 1996 161 166
29. T.K. Das, J.M. Friedman, A.P. Kloek, D.E. Goldberg, and D.L. Rousseau Origin of the anomalous Fe-CO stretching mode in the CO complex of Ascaris hemoglobin Biochemistry 39 2000 837 842
30. M. Mukai, C.E. Mills, R. Poole, and S.-R. Yeh Flavohemoglobin, a globin with a peroxidase-like catalytic site J. Biol. Chem. 276 2001 7272 7277
31. J.B. Wittenberg, M. Bolognesi, B.A. Wittenberg, and M. Guertin Truncated hemoglobins: a new family of hemoglobins widely distributed in bacteria, unicellular eukaryotes, and plants J. Biol. Chem. 277 2002 871 874
32. S. Kundu, G.C. Blouin, S.A. Premer, G. Sarah, J.S. Olson, and M.S. Hargrove Tyrosine B10 inhibits stabilization of bound carbon monoxide and oxygen in soybean leghemoglobin Biochemistry 43 2004 6241 6252
33. S. Huang, J. Huang, A.P. Kloek, D.E. Goldberg, and J.M. Friedman Hydrogen bonding of tyrosine B10 to heme-bound oxygen in Ascaris hemoglobin. Direct evidence from UV resonance Raman spectroscopy J. Biol. Chem. 271 1996 958 962
34. T.K. Das, M. Couture, H.C. Lee, J. Peisach, D.L. Rousseau, B.A. Wittenberg, J.B. Wittenberg, and M. Guertin Identification of the ligands to the ferric heme of Chlamydomonas chloroplast hemoglobin: evidence for ligation of tyrosine-63 (B10) to the heme Biochemistry 38 1999 5360 5368
35. M. Couture, T.K. Das, H.C. Lee, J. Peisach, D.L. Rousseau, B.A. Wittenberg, J.B. Wittenberg, and M. Guertin Chlamydomonas chloroplast ferrous hemoglobin. Heme pocket structure and reactions with ligands J. Biol. Chem. 274 1999 6898 6910
36. M. Couture, T.K. Das, P.Y. Savard, Y. Ouellet, J.B. Wittenberg, B.A. Wittenberg, and D.L. Rousseau Guertin, structural investigations of the hemoglobin of the cyanobacterium Synechocystis PCC6803 reveal a unique distal heme pocket Eur. J. Biochem. 267 2000 4770 4780
37. T.K. Das, R.E. Weber, S. Dewilde, J.B. Wittenberg, B.A. Wittenberg, K. Yamauchi, M.L. Van Hauwaert, L. Moens, and D.L. Rousseau Ligand binding in the ferric and ferrous states of Paramecium hemoglobin Biochemistry 39 2000 14330 14340