Solution and crystal structures of a sperm whale myoglobin triple mutant that mimics the sulfide-binding hemoglobin from Lucina pectinata

Journal of Biological Chemistry

Volumn 273, Issue 16, 1998, Pages 9517-9526

  Nguyen, Bao D ^a   Zhao, Xuefeng ^a   Vyas, Krishnamurthi ^a   La Mar, Gerd N ^a   Lile, R Ashley ^b   Brucker, Eric Allen ^b,d   Phillips Jr , George N ^b   Olson, John S ^b   Wittenberg, Jonathan B ^c  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b RICE UNIVERSITY   (United States)

^c ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

^d BAXTER HEALTHCARE CORPORATION   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

HEMOGLOBIN; MUTANT PROTEIN; MYOGLOBIN;

ARTICLE; CRYSTAL STRUCTURE; MOLLUSC; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CONFORMATION; PROTEIN STRUCTURE; STRUCTURE ANALYSIS; WHALE; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; BIVALVIA; CRYSTALLOGRAPHY, X-RAY; GLUTAMINE; HEME; HEMOGLOBINS; HEMOGLOBINS, ABNORMAL; MODELS, MOLECULAR; MUTAGENESIS, SITE-DIRECTED; MYOGLOBIN; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PHENYLALANINE; POINT MUTATION; PROTEIN CONFORMATION; RECOMBINANT PROTEINS; WHALES; X-RAY DIFFRACTION;

EID: 0032540246     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.273.16.9517     Document Type: Article

References (57)

1. Lesk, A. M., and Chothia, C. (1980) J. Mol. Biol. 136, 225-270
2. Bashford, D., Chothia, C., and Lesk, A. M. (1987) J. Mol. Biol. 196, 199-216
3. Vinogradov, S. N., Walz, D. A., Pohajdak, B., Moens, L., Kapp, O. H., Susuzki, T., and Trotman, C. N. A. (1993) Comp. Biochern. Physiol. 106, 1-26
4. Romero-Herrera, A. E., Goodman, M., Dene, H., Bartiniki, D. E., and Mizukami, H. (1981) J. Mol. Evol. 17, 140-147
5. Suzuki, T., Muramatsu, R., Kisamori, T., and Furukohri, T. (1988) Zool. Sci. 5, 69-76
6. Liljeqvist, G., Paléus, S., and Braunitzer, G. (1982) J. Mol. Evol. 18, 102-108
7. Stenzel, P., Brimhall, B., Jones, R. T., Black, J. A., McLachlan, A., and Gibson, D. (1979) J. Biol. Chem. 254, 2071-2076
8. Bolognesi, M., Onesti, S., Gatti, G., Coda, A., Ascenzi, P., Giacometti, A., and Brunori, M. (1989) J. Mol. Biol. 205, 529-544
9. Suzuki, T., Furukohri, T., and Okamoto, S. (1993) J. Protein Chem. 12, 45-50
10. Rashid, K. A., Van Hauwaert, M.-L., Haque, M., Siddiqi, A. H., Lasters, I., De Mayer, M., Griffon, N., Marden, M. C., Dewilde, S., Clauwaert, J., Vinogradov, N., and Moens, L. (1997) J. Biol. Chem. 272, 2992-2999
11. Zhang, W., Rashid, K. A., Haque, M., Siddiqi, A. H., Vinogradov, S. N., Moens, L., and La Mar, G. N. (1997) J. Biol. Chem. 272, 3000-3006
12. Arents, G., and Love, W. E. (1989) J. Mol. Biol. 210, 149-161
13. Travaglini Allocatelli, C., Cutruzzolá, F., Brancaccio, A., Brunori, M., Qin, J., and La Mar, G. N. (1993) Biochemistry 32, 6041-6049
14. Vyas, K., Rajarathnam, K., Yu, L. P., Emerson, S. D., La Mar, G. N., Krishnamoorthi, R., and Mizukami, H. (1993) J. Biol. Chem. 268, 14826-14835
15. Qin, J., La Mar, G. N., Ascoli, F., and Brunori, M. (1993) J. Mol. Biol. 231, 2009-1023
16. Qin, J., La Mar, G. N., Cutruzzolá, F., Travaglini Allocatelli, C., Brancaccio, A., and Brunori, M. (1993) Biophys. J. 65, 2178-2190
17. Zhao, X., Vyas, K., Nguyen, B. D., Rajarathnam, K., La Mar, G. N., Li, T., Phillips, G. N., Jr., Eich, R. F., Olson, J. S., Ling, J., and Bocian, D. F., (1995) J. Biol. Chem. 270, 20763-20774
18. Wittenberg, J. (1985) Bull. Biol. Soc. Wash. 6, 301-310
19. Wittenberg, J. B. and Wittenberg, B. A. (1990) Annu. Rev. Biochem. Biophys. Commun. 19, 217-241
20. Wittenberg, J. B. and Kraus, D. W. (1991) in Structure and Function of Invertebrate Oxygen Carriers (Vinogradov, S. N., and Kapp, O. H., eds) pp. 323-330, Springer Verlag, New York
21. Fisher, C. R. (1990) Revs. Aquat. Sci. 2, 399-446
22. Childress, J. J., and Fisher, C. R. (1992) Oceanogr. Marine Biol. Annu. Rev. 30, 337-441
23. Kraus, D. W., and Wittenberg, J. B. (1990) J. Biol. Chem. 265, 16043-16053
24. Rizzi, M., Wittenberg, J. B., Coda, A., Fasano, M., Ascenzi, P., and Bolognesi, M. (1994) J. Mol. Biol. 244, 86-89
25. Rizzi, M., Wittenberg, J. B., Coda, A., Ascenzi, P., and Bolognesi, M. (1996) J. Mol. Biol. 258, 1-5
26. Zhang, W., Cutruzzolá, F., Travaglini Allocatelli, C., Brunori, M., and La Mar, G. N. (1997) Biophys. J. 73, 1019-1030
27. Bisig, D. A., Di Iorio, E. E., Diederichs, K., Winterhalter, K. H., and Pionteck, K. (1995) J. Biol. Chem. 270, 20754-20762
28. Springer, B. A., Sligar, S. G., Olson, J. S., and Phillips, G. N., Jr. (1994) Chem. Rev. 94, 699-714
29. Rajarathnam, K., La Mar, G. N., Chiu, M., and Sligar, S. G. (1992) J. Am. Chem. Soc. 114, 9048-9058
30. Rajarathnam, K., Qin, J., La Mar, G. N., Chiu, M. L., and Sligar, S. G. (1993) Biochemistry 32, 5670-5680
31. Egeberg, K. D., Springer, B. A., Sligar, S. G., Carver, T. E., Rohlfs, R. J., and Olson, J. S. (1990) J. Biol. Chem. 265, 11788-11795
32. Springer, B. A., Egeberg, K. D., Sligar, S. G., Rohlfs, R. J., Mathews, A. J., and Olson, J. S. (1989) J. Biol. Chem. 264, 3057-3060
33. Carver, T. E., Brantley, R. E., Jr., Singleton, E. W., Arduini, R. M., Quillin, M. L., Phillips, G. N., Jr., and Olson, J. S. (1992) J. Biol. Chem. 267, 14443-14450
34. Springer, B. A., and Sligar, S. G. (1987) Proc. Natl. Acad. Sci. U. S. A. 84, 8961-8965
35. Phillips, G. N., Jr., Arduini, R. M., Springer, B. A., and Sligar, S. G. (1990) Proteins Struct. Funct. Genet. 7, 358-365
36. Quillin, M. L., Arduini, R. M., Olson, J. S., and Phillips, G. N., Jr. (1993) J. Mol. Biol. 234, 140-155
37. Brünger, A. T., Kuriyan, J., and Karplus, M., (1987) Science 235, 458-460
38. Brünger, A. T., Karplus, M., and Petsko, G. A. (1989) Acta Crystallogr. Sec. A 45, 50-61
39. Brünger, A. T. (1992) X-PLOR Version 3.1 Manual, Yale University
40. Sack, J. S. (1988) J. Mol. Graph. 6, 244-245
41. Engh, R. A., and Huber, R. (1991) Acta Crystallogr. Sec. A 47, 392-400
42. Gupta, R. K. (1976) J. Magn. Res. 24, 461-465
43. Emerson, S. D., and La Mar, G. N. (1990) Biochemistry 29, 1545-1556
44. Braunschweiler, L., and Ernst, R. R. (1983) J. Magn. Reson. 53, 521-528
45. Davis, D. G., and Bax, A. (1985) J. Am. Chem. Soc. 107, 2820-2821
46. Jeener, J., Meier, B. H., Bachmann, P., and Ernst, R. R. (1979) J. Chem. Phys. 71, 4546-4553
47. Bax, A. (1982) Two-dimensional Nuclear Magnetic Resonance in Liquids, Delft University Press, Dordrecht, Holland
48. States, D. J., Haberkorn, R. A., and Reuben, D. J. (1982) J. Magn. Reson. 48, 286-292
49. Qin, J., and La Mar, G. N. (1992) J. Biomol. NMR 2, 597-618
50. Emerson, S. D., and La Mar, G. N. (1990) Biochemistry 29, 1556-1566
51. Kuriyan, J., Witz, S., Karplus, M., and Petsko, G. A. (1986) J. Mol. Biol. 192, 133-154
52. Dalvit, C. G., and Wright, P. E. (1987) J. Mol. Biol. 194, 313-327
53. Chiu, M. L. (1992) Structure and Dynamics of Myoglobin and its Mutants, Ph.D. thesis, University of Illinois, Urbana, IL
54. Zhang, W., La Mar, G. N., and Gersonde, K., (1996) Eur. J. Biochem. 237, 841-853
55. Quillin, M. L., Li, T., Olson, J. S., Phillips, G. N., Jr., Dou, Y., Ikeda-Saito, M., Regan, R., and Gibson, Q. H. (1995) J. Mol. Biol. 245, 416-436
56. Carver, T. E., Rohlfs, R. J., Olson, J. S., Gibson, Q. H., Blackmore, R. S., Springer, B. A., and Sligar, S. G. (1990) J. Biol. Chem. 265, 20007-20020
57. Rajarathnam, K., Qin, J., La Mar, G. N., Chiu, M. L., and Sligar, S. G. (1994) Biochemistry 33, 5493-5501