Identification of AcnR, a TetR-type repressor of the aconitase gene acn in Corynebacterium glutamicum

Journal of Biological Chemistry

Volumn 280, Issue 1, 2005, Pages 585-595

  Krug, Andreas ^a   Wendisch, Volker F ^a   Bott, Michael ^a  

^a FORSCHUNGSZENTRUM JÜLICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BINDING ENERGY; CARBOXYLIC ACIDS; DNA; ENZYME INHIBITION; GENES; GLUCOSE; MUTAGENESIS; RNA;

CORNYBACTERIUM GLUTAMICUM; GENE ENCODING; MYCOBACTERIA; TRICARBOXYLIC ACID CYCLE;

ENZYMES;

ACETIC ACID; ACONITATE HYDRATASE; CITRATE SYNTHASE; ISOCITRATE DEHYDROGENASE; MESSENGER RNA; RNA POLYMERASE;

ACNR GENE; ARTICLE; CITRIC ACID CYCLE; CONTROLLED STUDY; CORYNEBACTERIUM GLUTAMICUM; DNA MICROARRAY; ENZYME ACTIVITY; ENZYME BINDING; GENE DELETION; GENE EXPRESSION; GENE IDENTIFICATION; GENE MUTATION; GENE SEQUENCE; GENE TARGETING; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN MOTIF; REGULATOR GENE; TRANSCRIPTION REGULATION;

ACONITATE HYDRATASE; AMINO ACID SEQUENCE; BACTERIAL PROTEINS; CORYNEBACTERIUM GLUTAMICUM; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; GENES, REGULATOR; MOLECULAR SEQUENCE DATA; REPRESSOR PROTEINS; SEQUENCE ALIGNMENT; SPECIES SPECIFICITY; TRANS-ACTIVATION (GENETICS);

ACTINOBACTERIA (CLASS); CORYNEBACTERINEAE; CORYNEBACTERIUM; CORYNEBACTERIUM GLUTAMICUM; UNCULTURED ACTINOMYCETE;

EID: 12844279897     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M408271200     Document Type: Article

References (63)

1. Kinoshita, S., Udaka, S., and Shimono, M. (1957) J. Gen. Appl. Microbiol. 3, 193-205
2. Eggeling, L., and Sahm, H. (1999) Appl. Microbiol. Biotechnol. 52, 146-153
3. Kimura, E. (2003) in Microbial Production of L-Amino Acids (Faurie, R., and Thommel, J., eds) Vol. 79, pp. 37-57, Springer, Heidelberg
4. Pfefferle, W., Möckel, B., Bathe, B., and Marx, A. (2003) in Microbial Production of L-Amino Acids (Faurie, R., and Thommel, J., eds) Vol. 79, pp. 59-112, Springer, Heidelberg
5. Hermann, T. (2003) J. Biotechnol. 104, 155-172
6. Stackebrandt, E., Rainey, F. A., and WardRainey, N. L. (1997) Int. J. Syst. Bacteriol. 47, 479-491
7. Eikmanns, B. J., Thum-Schmitz, N., Eggeling, L., Lüdtke, K. U., and Sahm, H. (1994) Microbiology 140, 1817-1828
8. Eikmanns, B. J., Rittmann, D., and Sahm, H. (1995) J. Bacteriol. 177, 774-782
9. Usuda, Y., Tujimoto, N., Abe, C., Asakura, Y., Kimura, E., Kawahara, Y., Kurahashi, O., and Matsui, H. (1996) Microbiology 142, 3347-3354
10. Molenaar, D., van der Rest, M. E., and Petrovic, S. (1998) Eur. J. Biochem. 254, 395-403
11. Molenaar, D., van der Rest, M. E., Drysch, A., and Yücel, R. (2000) J. Bacteriol. 182, 6884-6891
12. Wendisch, V. F., de Graaf, A. A., Sahm, H., and Eikmanns, B. J. (2000) J. Bacteriol. 182, 3088-3096
13. Beinert, H., Kennedy, M. C., and Stout, C. D. (1996) Chem. Rev. 96, 2335-2374
14. Alen, C., and Sonenshein, A. L. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 10412-10417
15. Beinert, H., and Kiley, P. J. (1999) Curr. Opin. Chem. Biol. 3, 152-157
16. Tang, Y., and Guest, J. R. (1999) Microbiology 145, 3069-3079
17. Tang, Y., Quail, M. A., Artymiuk, P. J., Guest, J. R., and Green, J. (2002) Microbiology 148, 1027-1037
18. Tang, Y., Guest, J. R., Artymiuk, P. J., Read, R. C., and Green, J. (2004) Mol. Microbiol. 51, 1817-1826
19. Menkel, E., Thierbach, G., Eggeling, L., and Sahm, H. (1989) Appl. Environ. Microbiol. 55, 684-688
20. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning. A Laboratory Manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
21. Keilhauer, C., Eggeling, L., and Sahm, H. (1993) J. Bacteriol. 175, 5595-5603
22. Studier, F. W., and Moffatt, B. A. (1986) J. Mol. Biol. 189, 113-130
23. Henson, C. P., and Cleland, W. W. (1967) J. Biol. Chem. 242, 3833-3838
24. Hanahan, D. (1985) in DNA Cloning (Glover, D. M., ed) Vol. 1, pp. 109-135, IRL-Press, Oxford/Washington D. C.
25. van der Rest, M. E., Lange, C., and Molenaar, D. (1999) Appl. Microbiol. Biotechnol. 52, 541-545
26. Niebisch, A., and Bott, M. (2001) Arch. Microbiol. 175, 282-294
27. Schäfer, A., Tauch, A., Jäger, W., Kalinowski, J., Thierbach, G., and Pühler, A. (1994) Gene (Amst.) 145, 69-73
28. Skerra, A., and Schmidt, T. G. (2000) Methods Enzymol. 326, 271-304
29. Engels, S., Schweitzer, J. E., Ludwig, C., Bott, M., and Schaffer, S. (2004) Mol. Microbiol. 52, 285-302
30. Wendisch, V. F., Zimmer, D. P., Khodursky, A., Peter, B., Cozzarelli, N., and Kusta, S. (2001) Anal. Biochem. 290, 205-213
31. Möker, N., Brocker, M., Schaffer, S., Krämer, R., Morbach, S., and Bott, M. (2004) Mol. Microbiol. 54, 420-438
32. Wendisch, V. F. (2003) J. Biotechnol. 104, 273-285
33. Polen, T., Rittmann, D., Wendisch, V. F., and Sahm, H. (2003) Appl. Environ. Microbiol. 69, 1759-1774
34. Lange, C., Rittmann, D., Wendisch, V. F., Bott, M., and Sahm, H. (2003) Appl. Environ. Microbiol. 69, 2521-2532
35. Ishige, T., Krause, M., Bott, M., Wendisch, V. F., and Sahm, H. (2003) J. Bacteriol. 185, 4519-4529
36. Eisen, M. B., Spellman, P. T., Brown, P. O., and Botstein, D. (1998) Proc. Natl. Acad. Sci. U. S. A. 95, 14863-14868
37. Laemmli, U. K. (1970) Nature 227, 680-685
38. Claes, W. A., Pühler, A., and Kalinowski, J. (2002) J. Bacteriol. 184, 2728-2739
39. Textor, S., Wendisch, V. F., De Graaf, A. A., Müller, U., Linder, M. I., Linder, D., and Buckel, W. (1997) Arch. Microbiol. 168, 428-436
40. Brock, M., Maerker, C., Schutz, A., Volker, U., and Buckel, W. (2002) Eur. J. Biochem. 269, 6184-6194
41. Gerstmeir, R., Wendisch, V. F., Schnicke, S., Ruan, H., Farwick, M., Reinscheid, D., and Eikmanns, B. J. (2003) J. Biotechnol. 104, 99-122
42. Kalinowski, J., Bathe, B., Bartels, D., Bischoff, N., Bott, M., Burkovski, A., Dusch, N., Eggeling, L., Eikmanns, B. J., Gaigalat, L., Goesmann, A., Hartmann, M., Huthmacher, K., Krämer, R., Linke, B., McHardy, A. C., Meyer, F., Möckel, B., Pfefferte, W., Pühler, A., Rey, D. A., Rückert, C., Rupp, O., Sahm, H., Wendisch, V. F., Wiegrabe, I., and Tauch, A. (2003) J. Biotechnol. 104, 5-25
43. Schaffer, S., Weil, B., Nguyen, V. D., Dongmann, G., Gunther, K., Nickolaus, M., Hermann, T., and Bott, M. (2001) Electrophoresis 22, 4404-4422
44. Prodromou, C., Haynes, M. J., and Guest, J. R. (1991) J. Gen. Microbiol. 137, 2505-2515
45. Prodromou, C., Artymiuk, P. J., and Guest, J. E. (1992) Eur. J. Biochem. 204, 599-609
46. Gruer, M. J., and Guest, J. R. (1994) Microbiology 140, 2531-2541
47. Gruer, M. J., Artymiuk, P. J., and Guest, J. R. (1997) Trends Biochem. Sci. 22, 3-6
48. Cole, S. T., Eiglmeier, K., Parkhill, J., James, K. D., Thomson, N. R., Wheeler, P. R., Honore, N., Garnier, T., Churcher, C., Harris, D., Mungall, K., Basham, D., Brown, D., Chillingworth, T., Connor, R., Davies, R. M., Devlin, K., Duthoy, S., Feltwell, T., Fraser, A., Hamlin, N., Holroyd, S., Hornsby, T., Jagels, K., Lacroix, C., Maclean, J., Moule, S., Murphy, L., Oliver, K., Quail, M. A., Rajandream, M. A., Rutherford, K. M., Rutter, S., Seeger, K., Simon, S., Simmonds, M., Skelton, J., Squares, R., Squares, S., Stevens, K., Taylor, K., Whitehead, S., Woodward, J. R., and Barrell, B. G. (2001) Nature 409, 1007-1011
49. Bateman, A., Birney, E., Cerruti, L., Durbin, R., Etwiller, L., Eddy, S. R., Griffiths-Jones, S., Howe, K. L., Marshall, M., and Sonnhammer, E. L. (2002) Nucleic Acids Res. 30, 276-280
50. Aramaki, H., Yagi, N., and Suzuki, M. (1995) Protein Eng. 8, 1259-1266
51. Southern, E. M. (1975) J. Mol. Biol. 98, 503-517
52. Bott, M., and Niebisch, A. (2003) J. Biotechnol. 104, 129-153
53. Hinrichs, W., Kisker, C., Duvel, M., Muller, A., Tovar, K., Hillen, W., and Saenger, W. (1994) Science 264, 418-420
54. Grkovic, S., Brown, M. H., Schumacher, M. A., Brennan, R. G., and Skurray, R. A. (2001) J. Bacteriol. 183, 7102-7109
55. Engohang-Ndong, J., Baillat, D., Aumercier, M., Bellefontaine, F., Besra, G. S., Locht, C., and Baulard, A. R. (2004) Mol. Microbiol. 51, 175-188
56. Schumacher, M. A., Miller, M. C., Grkovic, S., Brown, M. H., Skurray, R. A., and Brennan, R. G. (2002) EMBO J. 21, 1210-1218
57. Wong, D. K., Lee, B. Y., Horwitz, M. A., and Gibson, B. W. (1999) Infect. Immun. 67, 327-336
58. Cunningham, L., Gruer, M. J., and Guest, J. R. (1997) Microbiology 143, 3795-3805
59. Jourlin-Castelli, C., Mani, N., Nakano, M. M., and Sonenshein, A. L. (2000) J. Mol. Biol. 295, 865-878
60. Kim, S. I., Jourlin-Castelli, C., Wellington, S. R., and Sonenshein, A. L. (2003) J. Mol. Biol. 334, 609-624
61. Kim, H. J., Kim, S. I., Ratnayake-Lecamwasam, M., Tachikawa, K., Sonenshein, A. L., and Strauch, M. (2003) J. Bacteriol. 185, 1672-1680
62. Gerstmeir, R., Cramer, A., Dangel, P., Schaffer, S., and Eikmanns, B. J. (2004) J. Bacteriol. 186, 2798-2809
63. Eikmanns, B. J., Heinertz, E., Liebl, W., and Sahm, H. (1991) Gene (Amst.) 102, 93-98