메뉴 건너뛰기




Volumn 10, Issue 4, 2003, Pages 167-180

Prediction of the Coding Sequences of Mouse Homologues of KIAA Gene: III. The Complete Nucleotide Sequences of 500 Mouse KIAA-homologous cDNAs Identified by Screening of Terminal Sequences of cDNA Clones Randomly Sampled from Size-fractionated Libraries

Author keywords

cDNA sequencing; Large proteins; mKIAA; Mouse; Novel genes; Orthologue; Protein coding region

Indexed keywords

AMINO ACID; COMPLEMENTARY DNA; NUCLEOTIDE;

EID: 12444318530     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/10.4.167     Document Type: Article
Times cited : (30)

References (36)
  • 1
    • 0037903275 scopus 로고    scopus 로고
    • Human Gene Mutation Database (HGMD(R)): 2003 Update
    • Stenson, P. D., Ball, E. V., Mort, M. et al. 2003, Human Gene Mutation Database (HGMD(R)): 2003 update, Hum. Mutat., 21, 577-581.
    • (2003) Hum. Mutat. , vol.21 , pp. 577-581
    • Stenson, P.D.1    Ball, E.V.2    Mort, M.3
  • 2
    • 0035998736 scopus 로고    scopus 로고
    • Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
    • Hamosh, A., Scott, A. F., Amberger, J., Bocchini, C., Valle, D., and McKusick, V. A. 2002, Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders, Nucleic Acids Res., 30, 52-55.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 52-55
    • Hamosh, A.1    Scott, A.F.2    Amberger, J.3    Bocchini, C.4    Valle, D.5    McKusick, V.A.6
  • 4
    • 0028685657 scopus 로고
    • Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1
    • Nomura, N., Miyajima, N., Sazuka, T. et al. 1994, Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1, DNA Res., 1, 27-35.
    • (1994) DNA Res. , vol.1 , pp. 27-35
    • Nomura, N.1    Miyajima, N.2    Sazuka, T.3
  • 5
    • 0030915681 scopus 로고    scopus 로고
    • Positionally cloned human disease genes: Patterns of evolutionary conservation and functional motifs
    • Mushegian, A. R., Bassett, D. E., Jr., Boguski, M. S., Bork, P., and Koonin, E. V. 1997, Positionally cloned human disease genes: patterns of evolutionary conservation and functional motifs, Proc. Natl. Acad. Sci. USA, 94, 5831-5836.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 5831-5836
    • Mushegian, A.R.1    Bassett D.E., Jr.2    Boguski, M.S.3    Bork, P.4    Koonin, E.V.5
  • 6
    • 0027979480 scopus 로고
    • The human CAN protein, a putative oncogene product associated with myeloid leukemogenesis, is a nuclear pore complex protein that faces the cytoplasm
    • Kraemer, D., Wozniak, R. W., Blobel, G., and Radu, A. 1994, The human CAN protein, a putative oncogene product associated with myeloid leukemogenesis, is a nuclear pore complex protein that faces the cytoplasm, Proc. Natl. Acad. Sci. USA, 91, 1519-1523.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 1519-1523
    • Kraemer, D.1    Wozniak, R.W.2    Blobel, G.3    Radu, A.4
  • 7
    • 0035136677 scopus 로고    scopus 로고
    • An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome
    • Toh, K. L., Jones, C. R., He, Y. et al. 2001, An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome, Science, 291, 1040-1043.
    • (2001) Science , vol.291 , pp. 1040-1043
    • Toh, K.L.1    Jones, C.R.2    He, Y.3
  • 8
    • 0343384355 scopus 로고    scopus 로고
    • ARSACS, a spastic ataxia common in northeastern Quebec, is caused by mutations in a new gene encoding an 11.5-kb ORF
    • Engert, J. C., Berube, P., Mercier, J. et al. 2000, ARSACS, a spastic ataxia common in northeastern Quebec, is caused by mutations in a new gene encoding an 11.5-kb ORF, Nat. Genet., 24, 120-125.
    • (2000) Nat. Genet. , vol.24 , pp. 120-125
    • Engert, J.C.1    Berube, P.2    Mercier, J.3
  • 9
    • 0035158639 scopus 로고    scopus 로고
    • Mutation of CDH23, encoding a new member of the cadherin gene family, causes Usher syndrome type 1D
    • Bolz, H., von Brederlow, B., Ramirez, A. et al. 2001, Mutation of CDH23, encoding a new member of the cadherin gene family, causes Usher syndrome type 1D, Nat. Genet., 27, 108-112.
    • (2001) Nat. Genet. , vol.27 , pp. 108-112
    • Bolz, H.1    Von Brederlow, B.2    Ramirez, A.3
  • 10
    • 17344361902 scopus 로고    scopus 로고
    • A missense mutation in the alphaB-crystallin chaperone gene causes a desmin-related myopathy
    • Vicart, P., Caron, A., Guicheney, P. et al. 1998, A missense mutation in the alphaB-crystallin chaperone gene causes a desmin-related myopathy, Nat. Genet., 20, 92-95.
    • (1998) Nat. Genet. , vol.20 , pp. 92-95
    • Vicart, P.1    Caron, A.2    Guicheney, P.3
  • 11
    • 0035981222 scopus 로고    scopus 로고
    • Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins
    • Nagase, T., Kikuno, R., and Ohara, O. 2001, Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins, DNA Res., 8, 319-327.
    • (2001) DNA Res. , vol.8 , pp. 319-327
    • Nagase, T.1    Kikuno, R.2    Ohara, O.3
  • 12
    • 0036927813 scopus 로고    scopus 로고
    • Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries
    • Okazaki, N., Kikuno, R., Ohara, R. et al. 2002, Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries, DNA Res., 9, 179-188.
    • (2002) DNA Res. , vol.9 , pp. 179-188
    • Okazaki, N.1    Kikuno, R.2    Ohara, R.3
  • 13
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Waterston, R. H., Lindblad-Toh, K., Birney, E. et al. 2002, Initial sequencing and comparative analysis of the mouse genome, Nature, 420, 520-562.
    • (2002) Nature , vol.420 , pp. 520-562
    • Waterston, R.H.1    Lindblad-Toh, K.2    Birney, E.3
  • 14
    • 0037255081 scopus 로고    scopus 로고
    • Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries
    • Okazaki, N., Kikuno, R., Ohara, R. et al. 2003, Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries, DNA Res., 10, 35-48.
    • (2003) DNA Res. , vol.10 , pp. 35-48
    • Okazaki, N.1    Kikuno, R.2    Ohara, R.3
  • 15
    • 0037673389 scopus 로고    scopus 로고
    • Human disease genes and their cloned mouse orthologs: Exploration of the FANTOM2 cDNA sequence data set
    • Schriml, L. M., Hill, D. P., Blake, J. A. et al. 2003, Human disease genes and their cloned mouse orthologs: exploration of the FANTOM2 cDNA sequence data set, Genome Res., 13, 1496-1500.
    • (2003) Genome Res. , vol.13 , pp. 1496-1500
    • Schriml, L.M.1    Hill, D.P.2    Blake, J.A.3
  • 17
    • 0037245989 scopus 로고    scopus 로고
    • Online Mendelian Inheritance in Animals (OMIA): A comparative knowledgebase of genetic disorders and other familial traits in non-laboratory animals
    • Nicholas, F. W. 2003, Online Mendelian Inheritance in Animals (OMIA): a comparative knowledgebase of genetic disorders and other familial traits in non-laboratory animals, Nucleic Acids Res., 31, 275-277.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 275-277
    • Nicholas, F.W.1
  • 18
    • 0036923947 scopus 로고    scopus 로고
    • Characterization of size-fractionated cDNA libraries generated by the in vitro recombination-assisted method
    • Ohara, O., Nagase, T., Mitsui, G. et al. 2002, Characterization of size-fractionated cDNA libraries generated by the in vitro recombination-assisted method, DNA Res., 9, 47-57.
    • (2002) DNA Res. , vol.9 , pp. 47-57
    • Ohara, O.1    Nagase, T.2    Mitsui, G.3
  • 19
    • 0033615373 scopus 로고    scopus 로고
    • Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain
    • Hirosawa, M., Nagase, T., Ishikawa, K., Kikuno, R., Nomura, N., and Ohara, O. 1999, Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain, DNA Res., 6, 329-336.
    • (1999) DNA Res. , vol.6 , pp. 329-336
    • Hirosawa, M.1    Nagase, T.2    Ishikawa, K.3    Kikuno, R.4    Nomura, N.5    Ohara, O.6
  • 20
    • 0033804557 scopus 로고    scopus 로고
    • Detection of spurious interruptions of protein-coding regions in cloned cDNA sequences by GeneMark analysis
    • Hirosawa, M., Ishikawa, K., Nagase, T., and Ohara, O. 2000, Detection of spurious interruptions of protein-coding regions in cloned cDNA sequences by GeneMark analysis, Genome Res., 10, 1333-1341.
    • (2000) Genome Res. , vol.10 , pp. 1333-1341
    • Hirosawa, M.1    Ishikawa, K.2    Nagase, T.3    Ohara, O.4
  • 21
    • 17844381297 scopus 로고    scopus 로고
    • High-throughput sequence identification of gene coding variants within alcohol-related QTLs
    • Ehringer, M. A., Thompson, J., Conroy, O. et al. 2001, High-throughput sequence identification of gene coding variants within alcohol-related QTLs, Mamm Genome, 12, 657-663.
    • (2001) Mamm Genome , vol.12 , pp. 657-663
    • Ehringer, M.A.1    Thompson, J.2    Conroy, O.3
  • 22
    • 0032483028 scopus 로고    scopus 로고
    • Evolutionary parameters of the transcribed mammalian genome: An analysis of 2,820 orthologous rodent and human sequences
    • Makalowski, W. and Boguski, M. S. 1998, Evolutionary parameters of the transcribed mammalian genome: an analysis of 2,820 orthologous rodent and human sequences, Proc. Natl. Acad. Sci. USA, 95, 9407-9412.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 9407-9412
    • Makalowski, W.1    Boguski, M.S.2
  • 23
    • 0037155162 scopus 로고    scopus 로고
    • Novel alternative splicings of BPAG1 (bullous pemphigoid antigen 1) including the domain structure closely related to MACF (microtubule actin cross-linking factor)
    • Okumura, M., Yamakawa, H., Ohara, O., and Owaribe, K. 2002, Novel alternative splicings of BPAG1 (bullous pemphigoid antigen 1) including the domain structure closely related to MACF (microtubule actin cross-linking factor), J. Biol. Chem., 277, 6682-6687.
    • (2002) J. Biol. Chem. , vol.277 , pp. 6682-6687
    • Okumura, M.1    Yamakawa, H.2    Ohara, O.3    Owaribe, K.4
  • 24
    • 0035921424 scopus 로고    scopus 로고
    • The BPAG1 locus: Alternative splicing produces multiple isoforms with distinct cytoskeletal linker domains, including predominant isoforms in neurons and muscles
    • Leung, C. L., Zheng, M., Prater, S. M., and Liem, R. K. 2001, The BPAG1 locus: Alternative splicing produces multiple isoforms with distinct cytoskeletal linker domains, including predominant isoforms in neurons and muscles, J. Cell Biol., 154, 691-697.
    • (2001) J. Cell Biol. , vol.154 , pp. 691-697
    • Leung, C.L.1    Zheng, M.2    Prater, S.M.3    Liem, R.K.4
  • 25
    • 0031732094 scopus 로고    scopus 로고
    • A computer program for aligning a cDNA sequence with a genomic DNA sequence
    • Florea, L., Hartzell, G., Zhang, Z., Rubin, G. M., and Miller, W. 1998, A computer program for aligning a cDNA sequence with a genomic DNA sequence, Genome Res., 8, 967-974.
    • (1998) Genome Res. , vol.8 , pp. 967-974
    • Florea, L.1    Hartzell, G.2    Zhang, Z.3    Rubin, G.M.4    Miller, W.5
  • 26
    • 0035824897 scopus 로고    scopus 로고
    • Increased myocardial Rab GTPase expression: A consequence and cause of cardiomyopathy
    • Wu, G., Yussman, M. G., Barrett, T. J. et al. 2001, Increased myocardial Rab GTPase expression: a consequence and cause of cardiomyopathy, Circ. Res., 89, 1130-1137.
    • (2001) Circ. Res. , vol.89 , pp. 1130-1137
    • Wu, G.1    Yussman, M.G.2    Barrett, T.J.3
  • 27
    • 0023142769 scopus 로고
    • A novel c-abl protein product in Philadelphia-positive acute lymphoblastic leukaemia
    • Kurzrock, R., Shtalrid, M., Romero, P. et al. 1987, A novel c-abl protein product in Philadelphia-positive acute lymphoblastic leukaemia, Nature, 325, 631-635.
    • (1987) Nature , vol.325 , pp. 631-635
    • Kurzrock, R.1    Shtalrid, M.2    Romero, P.3
  • 28
    • 0036252276 scopus 로고    scopus 로고
    • Male infertility, impaired spermatogenesis, and azoospermia in mice deficient for the pseudophosphatase Sbf1
    • Firestein, R., Nagy, P. L., Daly, M., Huie, P., Conti, M., and Cleary, M. L. 2002, Male infertility, impaired spermatogenesis, and azoospermia in mice deficient for the pseudophosphatase Sbf1, J. Clin. Invest., 109, 1165-1172.
    • (2002) J. Clin. Invest. , vol.109 , pp. 1165-1172
    • Firestein, R.1    Nagy, P.L.2    Daly, M.3    Huie, P.4    Conti, M.5    Cleary, M.L.6
  • 29
    • 0027720285 scopus 로고
    • Neu and its ligands: From an oncogene to neural factors
    • Peles, E. and Yarden, Y. 1993, Neu and its ligands: from an oncogene to neural factors, Bioessays, 15, 815-824.
    • (1993) Bioessays , vol.15 , pp. 815-824
    • Peles, E.1    Yarden, Y.2
  • 30
    • 0036637641 scopus 로고    scopus 로고
    • unc-53 controls longitudinal migration in C. elegans
    • Stringham, E., Pujol, N., Vandekerckhove, J., and Bogaert, T. 2002, unc-53 controls longitudinal migration in C. elegans, Development, 129, 3367-3379.
    • (2002) Development , vol.129 , pp. 3367-3379
    • Stringham, E.1    Pujol, N.2    Vandekerckhove, J.3    Bogaert, T.4
  • 31
    • 0035474311 scopus 로고    scopus 로고
    • The actin filament-associated protein AFAP-110 is an adaptor protein that modulates changes in actin filament integrity
    • Baisden, J. M., Qian, Y., Zot, H. M., and Flynn, D. C. 2001, The actin filament-associated protein AFAP-110 is an adaptor protein that modulates changes in actin filament integrity, Oncogene, 20, 6435-6447.
    • (2001) Oncogene , vol.20 , pp. 6435-6447
    • Baisden, J.M.1    Qian, Y.2    Zot, H.M.3    Flynn, D.C.4
  • 32
    • 0028969937 scopus 로고
    • Rapid isolation and characterization of 118 novel C2H2-type zinc finger cDNAs expressed in human brain
    • Becker, K. G., Nagle, J. W., Canning, R. D., Biddison, W. E., Ozato, K., and Drew, P. D. 1995, Rapid isolation and characterization of 118 novel C2H2-type zinc finger cDNAs expressed in human brain, Hum. Mol. Genet., 4, 685-691.
    • (1995) Hum. Mol. Genet. , vol.4 , pp. 685-691
    • Becker, K.G.1    Nagle, J.W.2    Canning, R.D.3    Biddison, W.E.4    Ozato, K.5    Drew, P.D.6
  • 34
    • 0037197827 scopus 로고    scopus 로고
    • Oligo(dT) primer generates a high frequency of truncated cDNAs through internal poly(A) priming during reverse transcription
    • Nam, D. K., Lee, S., Zhou, G. et al. 2002, Oligo(dT) primer generates a high frequency of truncated cDNAs through internal poly(A) priming during reverse transcription, Proc. Natl. Acad. Sci. USA, 99, 6152-6156.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 6152-6156
    • Nam, D.K.1    Lee, S.2    Zhou, G.3
  • 35
    • 0032568596 scopus 로고    scopus 로고
    • Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships. PG-6073-8
    • Brenner, S. E., Chothia, C., and Hubbard, T. J. 1998, Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships. PG-6073-8, Proc. Natl. Acad. Sci. USA, 95, 6073-6078.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 6073-6078
    • Brenner, S.E.1    Chothia, C.2    Hubbard, T.J.3
  • 36
    • 0036932506 scopus 로고    scopus 로고
    • Construction of expression-ready cDNA clones for KIAA genes: Manual curation of 330 KIAA cDNA clones
    • Nakajima, D., Okazaki, N., Yamakawa, H., Kikuno, R., Ohara, O., and Nagase, T. 2002, Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones, DNA Res., 9, 99-106.
    • (2002) DNA Res. , vol.9 , pp. 99-106
    • Nakajima, D.1    Okazaki, N.2    Yamakawa, H.3    Kikuno, R.4    Ohara, O.5    Nagase, T.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.