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Volumn 10, Issue 1, 2003, Pages 35-48

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries

Author keywords

cDNA sequencing; Chromosomal localization; Large proteins; mKIAA; Mouse; Orthologue

Indexed keywords

AMINO ACID; COMPLEMENTARY DNA;

EID: 0037255081     PISSN: 13402838     EISSN: None     Source Type: Journal    
DOI: 10.1093/dnares/10.1.35     Document Type: Article
Times cited : (35)

References (24)
  • 1
    • 0034625235 scopus 로고    scopus 로고
    • The impact of comparative genomics on our understanding of evolution
    • Koonin, E. V., Aravind, L., and Kondrashov, A. S. 2000, The impact of comparative genomics on our understanding of evolution, Cell, 101, 573-576.
    • (2000) Cell , vol.101 , pp. 573-576
    • Koonin, E.V.1    Aravind, L.2    Kondrashov, A.S.3
  • 2
    • 0032509179 scopus 로고    scopus 로고
    • Comparison of the complete protein sets of worm and yeast: Orthology and divergence
    • Chervitz, S. A., Aravind, L., Sherlock, G. et al. 1998, Comparison of the complete protein sets of worm and yeast: orthology and divergence, Science, 282, 2022-2028.
    • (1998) Science , vol.282 , pp. 2022-2028
    • Chervitz, S.A.1    Aravind, L.2    Sherlock, G.3
  • 3
    • 0034708444 scopus 로고    scopus 로고
    • Comparative genomics of the eukaryotes
    • Rubin, G. M., Yandell, M. D., Wortman, J. R. et al. 2000, Comparative genomics of the eukaryotes, Science, 287, 2204-2215.
    • (2000) Science , vol.287 , pp. 2204-2215
    • Rubin, G.M.1    Yandell, M.D.2    Wortman, J.R.3
  • 4
    • 0031588576 scopus 로고    scopus 로고
    • Construction and characterization of human brain cDNA libraries suitable for analysis of cDNA clones encoding relatively large proteins
    • Ohara, O., Nagase, T., Ishikawa, K. et al. 1997, Construction and characterization of human brain cDNA libraries suitable for analysis of cDNA clones encoding relatively large proteins, DNA Res., 4, 53-59.
    • (1997) DNA Res. , vol.4 , pp. 53-59
    • Ohara, O.1    Nagase, T.2    Ishikawa, K.3
  • 5
    • 0027979480 scopus 로고
    • The human CAN protein, a putative oncogene product associated with myeloid leukemogenesis, is a nuclear pore complex protein that faces the cytoplasm
    • Kraemer, D., Wozniak, R. W., Blobel, G., and Radu, A. 1994, The human CAN protein, a putative oncogene product associated with myeloid leukemogenesis, is a nuclear pore complex protein that faces the cytoplasm, Proc. Natl. Acad. Sci. USA, 91, 1519-1523.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 1519-1523
    • Kraemer, D.1    Wozniak, R.W.2    Blobel, G.3    Radu, A.4
  • 6
    • 0035136677 scopus 로고    scopus 로고
    • An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome
    • Toh, K. L., Jones, C. R., He, Y., Eide, E. J. et al. 2001, An hPer2 phosphorylation site mutation in familial advanced sleep phase syndrome, Science, 291, 1040-1043.
    • (2001) Science , vol.291 , pp. 1040-1043
    • Toh, K.L.1    Jones, C.R.2    He, Y.3    Eide, E.J.4
  • 7
    • 0343384355 scopus 로고    scopus 로고
    • ARSACS, a spastic ataxia common in northeastern Quebec, is caused by mutations in a new gene encoding an 11.5-kb ORF
    • Engert, J. C., Berube, P., Mercier, J. et al. 2000, ARSACS, a spastic ataxia common in northeastern Quebec, is caused by mutations in a new gene encoding an 11.5-kb ORF, Nature Genet., 24, 120-125.
    • (2000) Nature Genet. , vol.24 , pp. 120-125
    • Engert, J.C.1    Berube, P.2    Mercier, J.3
  • 8
    • 0035158639 scopus 로고    scopus 로고
    • Mutation of CDH23, encoding a new member of the cadherin gene family, causes Usher syndrome type 1D
    • Bolz, H., von Brederlow, B., Ramirez, A. et al. 2001, Mutation of CDH23, encoding a new member of the cadherin gene family, causes Usher syndrome type 1D, Nature Genet., 27, 108-112.
    • (2001) Nature Genet. , vol.27 , pp. 108-112
    • Bolz, H.1    Von Brederlow, B.2    Ramirez, A.3
  • 9
    • 0028685657 scopus 로고
    • Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1
    • Nomura, N., Miyajima, N., Sazuka, T. et al. 1994, Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1, DNA Res., 1, 27-35.
    • (1994) DNA Res. , vol.1 , pp. 27-35
    • Nomura, N.1    Miyajima, N.2    Sazuka, T.3
  • 10
    • 0035981222 scopus 로고    scopus 로고
    • Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins
    • Nagase, T., Kikuno, R., and Ohara, O. 2001, Prediction of the coding sequences of unidentified human genes. XXII. The complete sequences of 50 new cDNA clones which code for large proteins, DNA Res., 8, 319-327.
    • (2001) DNA Res. , vol.8 , pp. 319-327
    • Nagase, T.1    Kikuno, R.2    Ohara, O.3
  • 11
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Waterston, R., Lindblad-Toh, K. Birney, E. et al. 2002, Initial sequencing and comparative analysis of the mouse genome., Nature, 420, 520-562.
    • (2002) Nature , vol.420 , pp. 520-562
    • Waterston, R.1    Lindblad-Toh, K.2    Birney, E.3
  • 12
    • 0036927813 scopus 로고    scopus 로고
    • Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries
    • Okazaki, N., Kikuno, R., Ohara, R. et al. 2002, Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries, DNA Res., 9, 179-188.
    • (2002) DNA Res. , vol.9 , pp. 179-188
    • Okazaki, N.1    Kikuno, R.2    Ohara, R.3
  • 13
    • 0036923947 scopus 로고    scopus 로고
    • Characterization of size-fractionated cDNA libraries generated by the in vitro recombination-assisted method
    • Ohara, O., Nagase, T., Mitsui, G. et al. 2002, Characterization of size-fractionated cDNA libraries generated by the in vitro recombination-assisted method, DNA Res., 9, 47-57.
    • (2002) DNA Res. , vol.9 , pp. 47-57
    • Ohara, O.1    Nagase, T.2    Mitsui, G.3
  • 14
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
    • Altschul, S. F., Madden, T. L., Schaffer, A. A. et al. 1997, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Res., 25, 3389-3402.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3389-3402
    • Altschul, S.F.1    Madden, T.L.2    Schaffer, A.A.3
  • 15
    • 0033615373 scopus 로고    scopus 로고
    • Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain
    • Hirosawa, M., Nagase, T., Ishikawa, K., Kikuno, R., Nomura, N., and Ohara, O. 1999, Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain, DNA Res., 6, 329-336.
    • (1999) DNA Res. , vol.6 , pp. 329-336
    • Hirosawa, M.1    Nagase, T.2    Ishikawa, K.3    Kikuno, R.4    Nomura, N.5    Ohara, O.6
  • 16
    • 0033804557 scopus 로고    scopus 로고
    • Detection of spurious interruptions of protein-coding regions in cloned cDNA sequences by GeneMark analysis
    • Hirosawa, M., Ishikawa, K., Nagase, T., and Ohara, O. 2000, Detection of spurious interruptions of protein-coding regions in cloned cDNA sequences by GeneMark analysis, Genome Res., 10, 1333-1341.
    • (2000) Genome Res. , vol.10 , pp. 1333-1341
    • Hirosawa, M.1    Ishikawa, K.2    Nagase, T.3    Ohara, O.4
  • 17
    • 0036221752 scopus 로고    scopus 로고
    • Characterization of novel Rab6-interacting proteins involved in endosome-to-TGN transport
    • Monier, S., Jollivet, F., Janoueix-Lerosey, I., Johannes, L., and Goud, B. 2002, Characterization of novel Rab6-interacting proteins involved in endosome-to-TGN transport, Traffic, 3, 289-297.
    • (2002) Traffic , vol.3 , pp. 289-297
    • Monier, S.1    Jollivet, F.2    Janoueix-Lerosey, I.3    Johannes, L.4    Goud, B.5
  • 18
    • 0036932506 scopus 로고    scopus 로고
    • Construction of expression-ready cDNA clones for KIAA genes: Manual curation of 330 KIAA cDNA clones
    • Nakajima, D., Okazaki, N., Yamakawa, H., Kikuno, R., Ohara, O., and Nagase, T. 2002, Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones, DNA Res., 9, 99-106.
    • (2002) DNA Res. , vol.9 , pp. 99-106
    • Nakajima, D.1    Okazaki, N.2    Yamakawa, H.3    Kikuno, R.4    Ohara, O.5    Nagase, T.6
  • 19
    • 0031732094 scopus 로고    scopus 로고
    • A computer program for aligning a cDNA sequence with a genomic DNA sequence
    • Florea, L., Hartzell, G., Zhang, Z., Rubin, G. M., and Miller, W. 1998, A computer program for aligning a cDNA sequence with a genomic DNA sequence, Genome Res., 8, 967-974.
    • (1998) Genome Res. , vol.8 , pp. 967-974
    • Florea, L.1    Hartzell, G.2    Zhang, Z.3    Rubin, G.M.4    Miller, W.5
  • 20
    • 0037197827 scopus 로고    scopus 로고
    • Oligo(dT) primer generates a high frequency of truncated cDNAs through internal poly(A) priming during reverse transcription
    • Nam, D. K., Lee, S., Zhou, G. et al. 2002, Oligo(dT) primer generates a high frequency of truncated cDNAs through internal poly(A) priming during reverse transcription, Proc. Natl. Acad. Sci. USA, 99, 6152-6156.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 6152-6156
    • Nam, D.K.1    Lee, S.2    Zhou, G.3
  • 21
    • 0029162555 scopus 로고
    • Cloning of the cDNA encoding human nonmuscle myosin heavy chain-B and analysis of human tissues with isoform-specific antibodies
    • Phillips, C. L., Yamakawa, K., and Adelstein, R. S. 1995, Cloning of the cDNA encoding human nonmuscle myosin heavy chain-B and analysis of human tissues with isoform-specific antibodies, J. Muscle Res. Cell Motil., 16, 379-389.
    • (1995) J. Muscle Res. Cell Motil. , vol.16 , pp. 379-389
    • Phillips, C.L.1    Yamakawa, K.2    Adelstein, R.S.3
  • 22
    • 0033583077 scopus 로고    scopus 로고
    • Characterization of a novel rat brain glycosylphosphatidylinositol-anchored protein (Kilon), a member of the IgLON cell adhesion molecule family
    • Funatsu, N., Miyata, S., Kumanogoh, H. et al. 1999, Characterization of a novel rat brain glycosylphosphatidylinositol-anchored protein (Kilon), a member of the IgLON cell adhesion molecule family, J. Biol. Chem., 274, 8224-8230.
    • (1999) J. Biol. Chem. , vol.274 , pp. 8224-8230
    • Funatsu, N.1    Miyata, S.2    Kumanogoh, H.3
  • 23
    • 0030213227 scopus 로고    scopus 로고
    • Interpreting cDNA sequences: Some insights from studies on translation
    • Kozak, M. 1996, Interpreting cDNA sequences: some insights from studies on translation, Mamm. Genome, 7, 563-574.
    • (1996) Mamm. Genome , vol.7 , pp. 563-574
    • Kozak, M.1
  • 24
    • 0032568596 scopus 로고    scopus 로고
    • Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships
    • Brenner, S. E., Chothia, C., and Hubbard, T. J. 1998, Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships, Proc. Natl. Acad. Sci. USA, 95, 6073-6078.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 6073-6078
    • Brenner, S.E.1    Chothia, C.2    Hubbard, T.J.3


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