-
2
-
-
0027249595
-
dbEST-database for 'expressed sequence tags'
-
Boguski,M.S., Lowe,T.M. and Tolstocher,C.M. (1993) dbEST-database for 'expressed sequence tags'. Nat. Genet., 4, 332-333.
-
(1993)
Nat. Genet.
, vol.4
, pp. 332-333
-
-
Boguski, M.S.1
Lowe, T.M.2
Tolstocher, C.M.3
-
3
-
-
0029355897
-
ESTablishing a human transcript map
-
Boguski,M.S. and Schuler,G.D. (1995) ESTablishing a human transcript map. Nat. Genet., 10, 369-371.
-
(1995)
Nat. Genet.
, vol.10
, pp. 369-371
-
-
Boguski, M.S.1
Schuler, G.D.2
-
4
-
-
0034710924
-
Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks
-
Butte,A.J., Tamayo,P., Slonim,D., Golub,T.R. and Kohane,I.S. (2000) Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks. Proc. Natl Acad. Sci. USA, 97, 12182-12186.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 12182-12186
-
-
Butte, A.J.1
Tamayo, P.2
Slonim, D.3
Golub, T.R.4
Kohane, I.S.5
-
5
-
-
14844364789
-
Post-analysis follow-up and validation of microarray experiments
-
Chuaqui,R.F., Bonner,R.F., Best,C.J., Gillespie,J.W., Flaig,M.J., Hewitt,S.M., Phillips,J.L., Krizman,D.B., Tangrea,M.A., Ahram,M. et al. (2002) Post-analysis follow-up and validation of microarray experiments. Nat. Genet., 32 (Suppl.), 509-514.
-
(2002)
Nat. Genet.
, vol.32
, Issue.SUPPL.
, pp. 509-514
-
-
Chuaqui, R.F.1
Bonner, R.F.2
Best, C.J.3
Gillespie, J.W.4
Flaig, M.J.5
Hewitt, S.M.6
Phillips, J.L.7
Krizman, D.B.8
Tangrea, M.A.9
Ahram, M.10
-
6
-
-
0033569406
-
Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
-
Golub,T.R., Slonim,D.K., Tamayo,P., Huard,C., Gaasenbeek,M., Mesirov,J.P., Coller,H., Loh,M.L., Downing,J.R., Caligiuri,M.A., Bloomfield,C.D. and Lander,E.S. (1999) Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science 286, 531-537.
-
(1999)
Science
, vol.286
, pp. 531-537
-
-
Golub, T.R.1
Slonim, D.K.2
Tamayo, P.3
Huard, C.4
Gaasenbeek, M.5
Mesirov, J.P.6
Coller, H.7
Loh, M.L.8
Downing, J.R.9
Caligiuri, M.A.10
Bloomfield, C.D.11
Lander, E.S.12
-
7
-
-
1842680967
-
Reproducibility, sources of variability, pooling, and sample size: Important considerations for the design of high-density oligonucleotide array experiments
-
Han,E.S., Wu,Y., McCarter,R., Nelson,J.F., Richardson,A. and Hilsenbeck,S.G. (2004) Reproducibility, sources of variability, pooling, and sample size: important considerations for the design of high-density oligonucleotide array experiments. J. Gerontol. A Biol. Sci. Med. Sci. 59, 306-315.
-
(2004)
J. Gerontol. A Biol. Sci. Med. Sci.
, vol.59
, pp. 306-315
-
-
Han, E.S.1
Wu, Y.2
McCarter, R.3
Nelson, J.F.4
Richardson, A.5
Hilsenbeck, S.G.6
-
8
-
-
0035998744
-
HugeIndex: A database with visualization tools for high-density oligonucleotide array data from normal human tissues
-
Haverty,P.M., Weng,Z., Best,N.L., Auerbach,K.R., Hsiao,L.L., Jensen,R.V. and Gullans,S.R. (2002) HugeIndex: a database with visualization tools for high-density oligonucleotide array data from normal human tissues. Nucleic Acids Res., 30, 214-217.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 214-217
-
-
Haverty, P.M.1
Weng, Z.2
Best, N.L.3
Auerbach, K.R.4
Hsiao, L.L.5
Jensen, R.V.6
Gullans, S.R.7
-
9
-
-
0035931072
-
A compendium of gene expression in normal human tissues
-
Hsiao,L.L., Dangond,F., Yoshida,T., Hong,R., Jensen,R.V., Misra,J., Dillon,W., Lee,K.F., Clark,K.E., Haverty,P. et al. (2001) A compendium of gene expression in normal human tissues. Physiol. Genomics, 7, 97-104.
-
(2001)
Physiol. Genomics
, vol.7
, pp. 97-104
-
-
Hsiao, L.L.1
Dangond, F.2
Yoshida, T.3
Hong, R.4
Jensen, R.V.5
Misra, J.6
Dillon, W.7
Lee, K.F.8
Clark, K.E.9
Haverty, P.10
-
10
-
-
0036161083
-
Correcting for signal saturation errors in the analysis of microarray data
-
334, 336
-
Hsiao,L.L., Jensen,R.V., Yoshida,T., Clark,K.E., Blumenstock,J.E. and Gullans,S.R. (2002) Correcting for signal saturation errors in the analysis of microarray data. BioTechniques, 32, 330-332, 334, 336.
-
(2002)
BioTechniques
, vol.32
, pp. 330-332
-
-
Hsiao, L.L.1
Jensen, R.V.2
Yoshida, T.3
Clark, K.E.4
Blumenstock, J.E.5
Gullans, S.R.6
-
11
-
-
0142121516
-
Exploration, normalization, and summaries of high density oligonucleotide array probe level data
-
Irizarry,R.A., Hobbs,B., Collin,F., Beazer-Barclay,Y.D., Antonellis,K.J., Scherf,U. and Speed,T.P. (2003) Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics, 4, 249-264.
-
(2003)
Biostatistics
, vol.4
, pp. 249-264
-
-
Irizarry, R.A.1
Hobbs, B.2
Collin, F.3
Beazer-Barclay, Y.D.4
Antonellis, K.J.5
Scherf, U.6
Speed, T.P.7
-
12
-
-
0034283071
-
Direct comparison of Gene-Chip and SAGE on the quantitative accuracy in transcript profiling analysis
-
Ishii,M., Hashimoto,S., Tsutsumi,S., Wada,Y., Matsushima,K., Kodama,T. and Aburatani,H. (2000) Direct comparison of Gene-Chip and SAGE on the quantitative accuracy in transcript profiling analysis. Genomics, 68, 136-143.
-
(2000)
Genomics
, vol.68
, pp. 136-143
-
-
Ishii, M.1
Hashimoto, S.2
Tsutsumi, S.3
Wada, Y.4
Matsushima, K.5
Kodama, T.6
Aburatani, H.7
-
13
-
-
0032903908
-
The transcriptional program in the response of human fibroblasts to serum
-
Iyer,V.R., Eisen,M.B., Ross,D.T., Schuler,G., Moore,T., Lee,J.C., Trent,J.M., Staudt,L.M., Hudson,J.,Jr, Broguski,M.S. et al. (1999) The transcriptional program in the response of human fibroblasts to serum. Science, 283, 83-87.
-
(1999)
Science
, vol.283
, pp. 83-87
-
-
Iyer, V.R.1
Eisen, M.B.2
Ross, D.T.3
Schuler, G.4
Moore, T.5
Lee, J.C.6
Trent, J.M.7
Staudt, L.M.8
Hudson Jr., J.9
Broguski, M.S.10
-
14
-
-
0036211063
-
Analysis of matched mRNA measurements from two different microarray technologies
-
Kuo,W.P., Jenssen,T.K., Butte,A.J., Ohno-Machado,L. and Kohane,I.S. (2002) Analysis of matched mRNA measurements from two different microarray technologies. Bioinformatics, 18, 405-412.
-
(2002)
Bioinformatics
, vol.18
, pp. 405-412
-
-
Kuo, W.P.1
Jenssen, T.K.2
Butte, A.J.3
Ohno-Machado, L.4
Kohane, I.S.5
-
15
-
-
0033853089
-
SAGEmap: A public gene expression resource
-
Lash,A.E., Tolstoshev,C.M., Wagner,L., Schuler,G.D., Strausberg,R.L., Riggins,G.J. and Altschul,S.F. (2000) SAGEmap: a public gene expression resource. Genome Res., 10, 1051-1060.
-
(2000)
Genome Res.
, vol.10
, pp. 1051-1060
-
-
Lash, A.E.1
Tolstoshev, C.M.2
Wagner, L.3
Schuler, G.D.4
Strausberg, R.L.5
Riggins, G.J.6
Altschul, S.F.7
-
16
-
-
10544256600
-
Expression monitoring by hybridization to high-density oligonucleotide arrays
-
Lockhart,D.J., Dong,H., Byrne,M.C., Follettie,M.T., Gallo,M.V., Chee,M.S., Mittmann,M., Wang,C., Kobayashi,M., Horton,H. and Brown,E.L. (1996) Expression monitoring by hybridization to high-density oligonucleotide arrays. Nat. Biotechnol., 14, 1675-1680.
-
(1996)
Nat. Biotechnol.
, vol.14
, pp. 1675-1680
-
-
Lockhart, D.J.1
Dong, H.2
Byrne, M.C.3
Follettie, M.T.4
Gallo, M.V.5
Chee, M.S.6
Mittmann, M.7
Wang, C.8
Kobayashi, M.9
Horton, H.10
Brown, E.L.11
-
17
-
-
0034794796
-
Expression profiling of medulloblastoma: PDGFRA and the RAS/MAPK pathway as therapeutic targets for metastatic disease
-
MacDonald,T.J., Brown,K.M., LaFleur,B., Peterson,K., Lawlor,C., Chen,Y., Packer,R.J., Cogen,P. and Stephen,D.A. (2001) Expression profiling of medulloblastoma: PDGFRA and the RAS/MAPK pathway as therapeutic targets for metastatic disease. Nat. Genet., 29 143-152.
-
(2001)
Nat. Genet.
, vol.29
, pp. 143-152
-
-
MacDonald, T.J.1
Brown, K.M.2
LaFleur, B.3
Peterson, K.4
Lawlor, C.5
Chen, Y.6
Packer, R.J.7
Cogen, P.8
Stephen, D.A.9
-
18
-
-
0037165140
-
Prediction of central nervous system embryonal tumour outcome based on gene expression
-
Pomeroy,S.L., Tamayo,P., Gaasenbeek,M., Sturla,L.M., Angelo,M., McLaughlin,M.E., Kim,J.Y., Goumnerova,L.C., Black,P.M., Lau,C. et al. (2002) Prediction of central nervous system embryonal tumour outcome based on gene expression. Nature 415, 436-442.
-
(2002)
Nature
, vol.415
, pp. 436-442
-
-
Pomeroy, S.L.1
Tamayo, P.2
Gaasenbeek, M.3
Sturla, L.M.4
Angelo, M.5
McLaughlin, M.E.6
Kim, J.Y.7
Goumnerova, L.C.8
Black, P.M.9
Lau, C.10
-
19
-
-
2342440523
-
Finding coexpressed genes in counts-based data: An improved measure with validation experiments
-
Price,M.N. and Rieffel,E. (2004) Finding coexpressed genes in counts-based data: an improved measure with validation experiments. Bioinformatics, 20, 945-952.
-
(2004)
Bioinformatics
, vol.20
, pp. 945-952
-
-
Price, M.N.1
Rieffel, E.2
-
20
-
-
0036898577
-
Microarray data normalization and transformation
-
Quackenbush,J. (2002) Microarray data normalization and transformation. Nat. Genet., 32, (Suppl.), 496-501.
-
(2002)
Nat. Genet.
, vol.32
, Issue.SUPPL.
, pp. 496-501
-
-
Quackenbush, J.1
-
21
-
-
0003929580
-
-
Weizmann Institute of Science, Bioinformatics Unit and Genome Center, Rehovot, Israel
-
Rebhan,M., Chalifa-Caspi,V., Prilusky,J. and Lancet,D. (1997) GeneCards: encyclopedia for genes, proteins and diseases. Weizmann Institute of Science, Bioinformatics Unit and Genome Center, Rehovot, Israel.
-
(1997)
GeneCards: Encyclopedia for Genes, Proteins and Diseases
-
-
Rebhan, M.1
Chalifa-Caspi, V.2
Prilusky, J.3
Lancet, D.4
-
22
-
-
0034050902
-
Systematic variation in gene expression patterns in human cancer cell lines
-
Ross,D.T., Scherf,U., Eisen,M.B., Perou,C.M., Rees,C., Spellman,P., Iyer,V., Jeffrey,S.S., Van de Rijn,M., Waltham,M. et al. (2000) Systematic variation in gene expression patterns in human cancer cell lines. Nat. Genet., 24, 227-235.
-
(2000)
Nat. Genet.
, vol.24
, pp. 227-235
-
-
Ross, D.T.1
Scherf, U.2
Eisen, M.B.3
Perou, C.M.4
Rees, C.5
Spellman, P.6
Iyer, V.7
Jeffrey, S.S.8
Van de Rijn, M.9
Waltham, M.10
-
23
-
-
0028789793
-
Serial analysis of gene expression
-
Velculescu,V.E., Zhang,L., Vogelstein,B. and Kinzler,K.W. (1995) Serial analysis of gene expression. Science, 270, 484-487.
-
(1995)
Science
, vol.270
, pp. 484-487
-
-
Velculescu, V.E.1
Zhang, L.2
Vogelstein, B.3
Kinzler, K.W.4
-
24
-
-
0003001352
-
Model-based clustering and data transformations for gene expression data
-
Technical Report UW-CSE-2001-04-02. Department of Computer Science and Engineering, University of Washington, Seattle, WA
-
Yeung,K.Y., Fraley,C., Murua,A., Raftery,A.E. and Ruzzo,W. (2001) Model-based clustering and data transformations for gene expression data. Technical Report UW-CSE-2001-04-02. Department of Computer Science and Engineering, University of Washington, Seattle, WA.
-
(2001)
-
-
Yeung, K.Y.1
Fraley, C.2
Murua, A.3
Raftery, A.E.4
Ruzzo, W.5
-
25
-
-
0037095769
-
Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays
-
Yuen,T., Wurmbach,E., Pfeffer,R.L., Ebersole,B.J. and Sealfon,S.C. (2002) Accuracy and calibration of commercial oligonucleotide and custom cDNA microarrays. Nucleic Acids Res., 30, e48.
-
(2002)
Nucleic Acids Res.
, vol.30
-
-
Yuen, T.1
Wurmbach, E.2
Pfeffer, R.L.3
Ebersole, B.J.4
Sealfon, S.C.5
|