-
1
-
-
0142106992
-
DNA sequence artifacts and the estimation of time to the most recent common ancestor (TMRCA) of Plasmodium falcipari tm
-
Barry AE, Leliwa A, Choi M, Nielsen KM, Hartl DL, Day KP (2003) DNA sequence artifacts and the estimation of time to the most recent common ancestor (TMRCA) of Plasmodium falcipari tm. Mol Biochem Parasitol 130:143-147
-
(2003)
Mol Biochem Parasitol
, vol.130
, pp. 143-147
-
-
Barry, A.E.1
Leliwa, A.2
Choi, M.3
Nielsen, K.M.4
Hartl, D.L.5
Day, K.P.6
-
2
-
-
0033551061
-
High recombination rate in natural populations of Plasmodium falciparum
-
Conway DJ, Roper C, Oduola AMI, Arnot DE, Kremsner PG, Grobusch MP, Curtis C, Greenwood BM (1999) High recombination rate in natural populations of Plasmodium falciparum. Proc Natl Acad Sci USA 96:4506-4511
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 4506-4511
-
-
Conway, D.J.1
Roper, C.2
Oduola, A.M.I.3
Arnot, D.E.4
Kremsner, P.G.5
Grobusch, M.P.6
Curtis, C.7
Greenwood, B.M.8
-
3
-
-
0042860063
-
Artemisinins target the SERCA of Plasmodium falciparum
-
Eckstein-Ludwig U, Webb RJ, van Goethem IDA, East JM, Lee AG, Kimura M, O'Neil PM, Bray PG, Ward SA, Krishna S (2003) Artemisinins target the SERCA of Plasmodium falciparum. Nature 424:957-961
-
(2003)
Nature
, vol.424
, pp. 957-961
-
-
Eckstein-Ludwig, U.1
Webb, R.J.2
Van Goethem, I.D.A.3
East, J.M.4
Lee, A.G.5
Kimura, M.6
O'Neil, P.M.7
Bray, P.G.8
Ward, S.A.9
Krishna, S.10
-
4
-
-
0028113391
-
Phylogeny of the malarial genus Plasmodium, derived from rRNA gene sequences
-
Escalante AA, Ayala FJ (1994) Phylogeny of the malarial genus Plasmodium, derived from rRNA gene sequences. Proc Natl Acad Sci USA 91:11373-11377
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 11373-11377
-
-
Escalante, A.A.1
Ayala, F.J.2
-
5
-
-
0032493346
-
The evolution of primate malaria parasites based on the gene encoding cytochrome b from the linear mitochondrial genome
-
Escalante AA, Freeland DE, Collins WE, Lal AA (1998a) The evolution of primate malaria parasites based on the gene encoding cytochrome b from the linear mitochondrial genome. Proc Natl Acad Sci USA 95:8124-8129
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 8124-8129
-
-
Escalante, A.A.1
Freeland, D.E.2
Collins, W.E.3
Lal, A.A.4
-
6
-
-
0031804948
-
Genetic polymorphism and natural selection in the malaria parasite Plasmodium falciparum
-
Escalante AA, Lal AA, Ayala FJ (1998b) Genetic polymorphism and natural selection in the malaria parasite Plasmodium falciparum. Genetics 149:189-202
-
(1998)
Genetics
, vol.149
, pp. 189-202
-
-
Escalante, A.A.1
Lal, A.A.2
Ayala, F.J.3
-
7
-
-
0037015614
-
Genome sequence of the human malaria parasite Plasmodium falciparum
-
Gardner MJ, Hall N, Fung E, White O, Berriman M, Hyman RW, Carlton JM, Pain A, Nelson KE, Bowman S, Paulsen IT, James K, Eisen JA, Rutherford K, Salzberg SL, Craig A, Kyes S, Chan MS, Nene V, Shallom SJ, Suh B, Peterson J, Angiuoli S, Pertea M, Allen J, Selengut J, Haft D, Mather MW, Vaidya AB, Martin DM, Fairlamb AH, Fraunholz MJ, Roos DS, Ralph SA, McFadden GI, Cummings LM, Subramanian GM, Mungall C, Venter JC, Carucci DJ, Hoffman SL, Newbold C, Davis RW, Fraser CM, Barrell B (2002) Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 419:498-511
-
(2002)
Nature
, vol.419
, pp. 498-511
-
-
Gardner, M.J.1
Hall, N.2
Fung, E.3
White, O.4
Berriman, M.5
Hyman, R.W.6
Carlton, J.M.7
Pain, A.8
Nelson, K.E.9
Bowman, S.10
Paulsen, I.T.11
James, K.12
Eisen, J.A.13
Rutherford, K.14
Salzberg, S.L.15
Craig, A.16
Kyes, S.17
Chan, M.S.18
Nene, V.19
Shallom, S.J.20
Suh, B.21
Peterson, J.22
Angiuoli, S.23
Pertea, M.24
Allen, J.25
Selengut, J.26
Haft, D.27
Mather, M.W.28
Vaidya, A.B.29
Martin, D.M.30
Fairlamb, A.H.31
Fraunholz, M.J.32
Roos, D.S.33
Ralph, S.A.34
McFadden, G.I.35
Cummings, L.M.36
Subramanian, G.M.37
Mungall, C.38
Venter, J.C.39
Carucci, D.J.40
Hoffman, S.L.41
Newbold, C.42
Davis, R.W.43
Fraser, C.M.44
Barrell, B.45
more..
-
8
-
-
0026549203
-
Positive selection and interallelic recombination at the merozoite surface antigen-1 (MSA-1) locus of Plasmodium falciparum
-
Hughes AL (1992) Positive selection and interallelic recombination at the merozoite surface antigen-1 (MSA-1) locus of Plasmodium falciparum. Mol Biol Evol 9:381-393
-
(1992)
Mol Biol Evol
, vol.9
, pp. 381-393
-
-
Hughes, A.L.1
-
9
-
-
0029015776
-
Natural selection on Plasmodium surface proteins
-
Hughes MK, Hughes AL (1995) Natural selection on Plasmodium surface proteins. Mol Biochem Parasitol 71:99-113
-
(1995)
Mol Biochem Parasitol
, vol.71
, pp. 99-113
-
-
Hughes, M.K.1
Hughes, A.L.2
-
10
-
-
0023764283
-
Pattern of nucleotide substitution at MHC class I loci reveals overdominant selection
-
Hughes AL, Nei M (1988) Pattern of nucleotide substitution at MHC class I loci reveals overdominant selection. Nature 335:167-170
-
(1988)
Nature
, vol.335
, pp. 167-170
-
-
Hughes, A.L.1
Nei, M.2
-
11
-
-
0035823291
-
Very large long-term effective population size in the virulent human malaria parasite Plasmodium falciparum
-
Hughes AL, Verra F (2001) Very large long-term effective population size in the virulent human malaria parasite Plasmodium falciparum. Proc R Soc Lond B 268:1855-1860
-
(2001)
Proc R Soc Lond B
, vol.268
, pp. 1855-1860
-
-
Hughes, A.L.1
Verra, F.2
-
12
-
-
0036728807
-
The extent of nucleotide polymorphism is highly variable across a 3-kb region on Plasmodium falciparum chromosome 2
-
Jongwutiwes S, Putaporntip C, Friedman R, Hughes AL (2002) The extent of nucleotide polymorphism is highly variable across a 3-kb region on Plasmodium falciparum chromosome 2. Mol Biol Evol 9:1585-1590
-
(2002)
Mol Biol Evol
, vol.9
, pp. 1585-1590
-
-
Jongwutiwes, S.1
Putaporntip, C.2
Friedman, R.3
Hughes, A.L.4
-
13
-
-
0037432740
-
Early origin and recent expansion of Plasmodium falciparum
-
Joy DA, Feng X, Mu J, Furuya T, Chotivanich K, Krettli A, Ho M, Wang A, White NJ, Suh E, Beerli P, Su X-Z (2003) Early origin and recent expansion of Plasmodium falciparum. Science 300:318-321
-
(2003)
Science
, vol.300
, pp. 318-321
-
-
Joy, D.A.1
Feng, X.2
Mu, J.3
Furuya, T.4
Chotivanich, K.5
Krettli, A.6
Ho, M.7
Wang, A.8
White, N.J.9
Suh, E.10
Beerli, P.11
Su, X.-Z.12
-
14
-
-
0000732090
-
Evolution of protein molecules
-
Munro HN (ed) Academic Press, New York
-
Jukes TH, Cantor CR (1969) Evolution of protein molecules. In: Munro HN (ed) Mammalian protein metabolism. Academic Press, New York, pp 21-132
-
(1969)
Mammalian Protein Metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
15
-
-
0031148834
-
Plasmodium falciparum: Allelic variation in the merozoite surface protein 1 gene in wild isolates from southern Vietnam
-
Kaneko O, Kimura M, Kawamoto F, Ferreira MU, Tanabe K (1997) Plasmodium falciparum: allelic variation in the merozoite surface protein 1 gene in wild isolates from southern Vietnam. Exp Parasitol 86:45-57
-
(1997)
Exp Parasitol
, vol.86
, pp. 45-57
-
-
Kaneko, O.1
Kimura, M.2
Kawamoto, F.3
Ferreira, M.U.4
Tanabe, K.5
-
17
-
-
0036139211
-
MEGA2: Molecular evolutionary genetics analysis software
-
Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: Molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
18
-
-
0025784381
-
Circumsporozoite protein gene from Plasmodium reichenowi, a chimpanzee malaria parasite evolutionarily related to the human malaria parasite Plasmodium falciparum
-
Lal AA, Goldman IF (1991) Circumsporozoite protein gene from Plasmodium reichenowi, a chimpanzee malaria parasite evolutionarily related to the human malaria parasite Plasmodium falciparum. J Biol Chem 266:6686-6689
-
(1991)
J Biol Chem
, vol.266
, pp. 6686-6689
-
-
Lal, A.A.1
Goldman, I.F.2
-
20
-
-
0026428610
-
Adaptive protein evolution at the Adh locus in Drosophila
-
McDonald JH, Kreitman M (1991) Adaptive protein evolution at the Adh locus in Drosophila. Nature 351:652-654
-
(1991)
Nature
, vol.351
, pp. 652-654
-
-
McDonald, J.H.1
Kreitman, M.2
-
21
-
-
0001184996
-
The epidemiology of human malaria as an explanation of its distribution, including some implications for its control
-
Wernsdorfer WH, McGregor I (eds) Churchill Livingstone, Edinburgh
-
Molineaux L (1988) The epidemiology of human malaria as an explanation of its distribution, including some implications for its control. In: Wernsdorfer WH, McGregor I (eds) Malaria: Principles and practice of malariology, Vol 2. Churchill Livingstone, Edinburgh, pp 913-998
-
(1988)
Malaria: Principles and Practice of Malariology
, vol.2
, pp. 913-998
-
-
Molineaux, L.1
-
22
-
-
0037130233
-
Chromosome-wide SNPs reveal an ancient origin for Plasmodium falciparum
-
Mu J, Duan J, Makova KD, Joy DA, Huynh CQ, Branch OH, Li W-H, Su X-Z (2002) Chromosome-wide SNPs reveal an ancient origin for Plasmodium falciparum. Nature 418:323-326
-
(2002)
Nature
, vol.418
, pp. 323-326
-
-
Mu, J.1
Duan, J.2
Makova, K.D.3
Joy, D.A.4
Huynh, C.Q.5
Branch, O.H.6
Li, W.-H.7
Su, X.-Z.8
-
23
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
Nei M, Gojobori T (1986) Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol 3:418-426
-
(1986)
Mol Biol Evol
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
24
-
-
0032516099
-
Malaria's Eve: Evidence of a recent population bottleneck throughout the world population of Plasmodium falciparum
-
Rich SM, Licht MC, Hudson RR, Ayala FJ (1998) Malaria's Eve: Evidence of a recent population bottleneck throughout the world population of Plasmodium falciparum. Proc Natl Acad Sci USA 95:4425-4430
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 4425-4430
-
-
Rich, S.M.1
Licht, M.C.2
Hudson, R.R.3
Ayala, F.J.4
-
25
-
-
0032972599
-
DNASP version 3: An integrated program for molecular population genetics and molecular evolution analysis
-
Rozas J, Rozas R (1999) DNASP version 3: An integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15:174-175
-
(1999)
Bioinformatics
, vol.15
, pp. 174-175
-
-
Rozas, J.1
Rozas, R.2
-
26
-
-
0034775990
-
Long PCR amplification of Plasmodium falciparum DNA extracted from filter paper blots
-
Sakihama N, Mitamura T, Kaneko A, Horii T, Tanabe K (2001) Long PCR amplification of Plasmodium falciparum DNA extracted from filter paper blots. Exp Parasitol 97:50-54
-
(2001)
Exp Parasitol
, vol.97
, pp. 50-54
-
-
Sakihama, N.1
Mitamura, T.2
Kaneko, A.3
Horii, T.4
Tanabe, K.5
-
27
-
-
0032698219
-
A genetic map and recombination parameters of the human malaria parasite Plasmodium falciparum
-
Su X-Z, Ferdig M, Huang Y, Huynh CQ, Lu A, You J, Wootton JC, Wellems TE (1999) A genetic map and recombination parameters of the human malaria parasite Plasmodium falciparum. Science 286:1351-1353
-
(1999)
Science
, vol.286
, pp. 1351-1353
-
-
Su, X.-Z.1
Ferdig, M.2
Huang, Y.3
Huynh, C.Q.4
Lu, A.5
You, J.6
Wootton, J.C.7
Wellems, T.E.8
-
28
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
29
-
-
0037034778
-
Out of Africa again and again
-
Templeton A (2002) Out of Africa again and again. Nature 416:45-51
-
(2002)
Nature
, vol.416
, pp. 45-51
-
-
Templeton, A.1
-
30
-
-
0031574072
-
The CLUSTALX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmigin F, Higgins DG (1997) The CLUSTALX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876-4882
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmigin, F.4
Higgins, D.G.5
-
31
-
-
0035919665
-
Recent origin of Plasmodium falciparum from a single progenitor
-
Volkman SK, Barry AE, Lyons EJ, Nielsen KM, Thomas SM, Choi M, Thakore SS, Day KP, Wirth DF, Hartl DL (2001) Recent origin of Plasmodium falciparum from a single progenitor. Science 293:482-484
-
(2001)
Science
, vol.293
, pp. 482-484
-
-
Volkman, S.K.1
Barry, A.E.2
Lyons, E.J.3
Nielsen, K.M.4
Thomas, S.M.5
Choi, M.6
Thakore, S.S.7
Day, K.P.8
Wirth, D.F.9
Hartl, D.L.10
|