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Volumn 43, Issue 51, 2004, Pages 16515-16524

Analysis of non-template-directed nucleotide addition and template switching by DNA polymerase

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; DATA REDUCTION; ENZYME INHIBITION; ENZYME KINETICS; ERROR ANALYSIS; ESCHERICHIA COLI; SYNTHESIS (CHEMICAL);

EID: 11144281831     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi0491853     Document Type: Article
Times cited : (18)

References (28)
  • 2
    • 0023645858 scopus 로고
    • Novel blunt-end addition reactions catalyzed by DNA polymerase I of Escherichia coli
    • Clark, J. M., Joyce, C. M., and Beardsley, G. P. (1987) Novel blunt-end addition reactions catalyzed by DNA polymerase I of Escherichia coli, J. Mol. Biol. 198, 123-127.
    • (1987) J. Mol. Biol. , vol.198 , pp. 123-127
    • Clark, J.M.1    Joyce, C.M.2    Beardsley, G.P.3
  • 3
    • 0026067071 scopus 로고
    • A simple and efficient method for direct cloning of PCR products using ddT-tailed vectors
    • Holton, T. A., and Graham, M. W. (1991) A simple and efficient method for direct cloning of PCR products using ddT-tailed vectors, Nucleic Acids Res. 19, 1156.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 1156
    • Holton, T.A.1    Graham, M.W.2
  • 4
    • 14744275908 scopus 로고
    • A universal method for the direct cloning of PCR amplified nucleic acid
    • Mead, D. A., Pey, N. K., Herrnstadt, C., Marcil, R. A., and Smith, L. M. (1991) A universal method for the direct cloning of PCR amplified nucleic acid, Biotechnology (NY) 9, 657-663.
    • (1991) Biotechnology (NY) , vol.9 , pp. 657-663
    • Mead, D.A.1    Pey, N.K.2    Herrnstadt, C.3    Marcil, R.A.4    Smith, L.M.5
  • 5
    • 0023734473 scopus 로고
    • Novel non-templated nucleotide addition reactions catalyzed by procaryotic and eucaryotic DNA polymerases
    • Clark, J. M. (1988) Novel non-templated nucleotide addition reactions catalyzed by procaryotic and eucaryotic DNA polymerases, Nucleic Acids Res. 16, 9677-9686.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 9677-9686
    • Clark, J.M.1
  • 7
    • 9244232997 scopus 로고
    • Enzymic synthesis of deoxyribonucleic acid. XVII. Some unusual physical properties of the product primed by native DNA templates
    • Schildkraut, C. L., Richardson, C. C., and Kornberg, A. (1964) Enzymic Synthesis of Deoxyribonucleic Acid. Xvii. Some Unusual Physical Properties of the Product Primed by Native DNA Templates, J. Mol. Biol. 116, 24-45.
    • (1964) J. Mol. Biol. , vol.116 , pp. 24-45
    • Schildkraut, C.L.1    Richardson, C.C.2    Kornberg, A.3
  • 8
    • 11144272980 scopus 로고
    • Enzymic synthesis of deoxyribonucleic acid. XX. Electron microscopy of products primed by native templates
    • Inman, R. B., Schildkraut, C. L., and Kornberg, A. (1965) Enzymic Synthesis of Deoxyribonucleic Acid. Xx. Electron Microscopy of Products Primed by Native Templates, J. Mol. Biol. 11, 285-292.
    • (1965) J. Mol. Biol. , vol.11 , pp. 285-292
    • Inman, R.B.1    Schildkraut, C.L.2    Kornberg, A.3
  • 9
    • 0025737845 scopus 로고
    • DNA synthesis on discontinuous templates by DNA polymerase I of Escherichia coli
    • Clark, J. M. (1991) DNA synthesis on discontinuous templates by DNA polymerase I of Escherichia coli, Gene 104, 75-80.
    • (1991) Gene , vol.104 , pp. 75-80
    • Clark, J.M.1
  • 10
    • 0028242329 scopus 로고
    • Bridging the gap. Joining of nonhomologous ends by DNA polymerases
    • King, J. S., Fairley, C. F., and Morgan, W. F. (1994) Bridging the gap. Joining of nonhomologous ends by DNA polymerases, J. Biol. Chem. 269, 13061-13064.
    • (1994) J. Biol. Chem. , vol.269 , pp. 13061-13064
    • King, J.S.1    Fairley, C.F.2    Morgan, W.F.3
  • 11
    • 0029829054 scopus 로고    scopus 로고
    • DNA end joining by the Klenow fragment of DNA polymerase I
    • King, J. S., Fairley, C. F., and Morgan, W. F. (1996) DNA end joining by the Klenow fragment of DNA polymerase I, J. Biol. Chem. 271, 20450-20457.
    • (1996) J. Biol. Chem. , vol.271 , pp. 20450-20457
    • King, J.S.1    Fairley, C.F.2    Morgan, W.F.3
  • 12
    • 0032529448 scopus 로고    scopus 로고
    • DNA synthesis on discontinuous templates by human DNA polymerases: Implications for non-homologous DNA recombination
    • Islas, A. L., Fairley, C. F., and Morgan, W. F. (1998) DNA synthesis on discontinuous templates by human DNA polymerases: implications for non-homologous DNA recombination, Nucleic Acids Res. 26, 3729-3738.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 3729-3738
    • Islas, A.L.1    Fairley, C.F.2    Morgan, W.F.3
  • 13
    • 0003518480 scopus 로고
    • John Wiley & Sons, New York
    • Segel, I. H. (1975) Enzyme Kinetics, John Wiley & Sons, New York.
    • (1975) Enzyme Kinetics
    • Segel, I.H.1
  • 14
    • 0027231782 scopus 로고
    • Structure of DNA polymerase I Klenow fragment bound to duplex DNA
    • Beese, L. S., Derbyshire, V., and Steitz, T. A. (1993) Structure of DNA polymerase I Klenow fragment bound to duplex DNA, Science 260, 352-355.
    • (1993) Science , vol.260 , pp. 352-355
    • Beese, L.S.1    Derbyshire, V.2    Steitz, T.A.3
  • 15
    • 0024365538 scopus 로고
    • Comparison of filler DNA at immune, nonimmune, and oncogenic rearrangements suggests multiple mechanisms of formation
    • Roth, D. B., Chang, X. B., and Wilson, J. H. (1989) Comparison of filler DNA at immune, nonimmune, and oncogenic rearrangements suggests multiple mechanisms of formation, Mol. Cell Biol. 9, 3049-3057.
    • (1989) Mol. Cell Biol. , vol.9 , pp. 3049-3057
    • Roth, D.B.1    Chang, X.B.2    Wilson, J.H.3
  • 16
    • 0027452074 scopus 로고
    • Mice lacking TdT: Mature animals with an immature lymphocyte repertoire
    • Gilfillan, S., Dierich, A., Lemeur, M., Benoist, C., and Mathis, D. (1993) Mice lacking TdT: mature animals with an immature lymphocyte repertoire, Science 261, 1175-1178.
    • (1993) Science , vol.261 , pp. 1175-1178
    • Gilfillan, S.1    Dierich, A.2    Lemeur, M.3    Benoist, C.4    Mathis, D.5
  • 17
    • 0036948404 scopus 로고    scopus 로고
    • Origins of spontaneous mutations: Specificity and directionality of base-substitution, frameshift, and sequence-substitution mutageneses
    • Maki, H. (2002) Origins of spontaneous mutations: specificity and directionality of base-substitution, frameshift, and sequence-substitution mutageneses, Annu. Rev. Genet. 36, 279-303.
    • (2002) Annu. Rev. Genet. , vol.36 , pp. 279-303
    • Maki, H.1
  • 18
    • 0019996140 scopus 로고
    • Model for the participation of quasi-palindromic DNA sequences in frameshift mutation
    • Ripley, L. S. (1982) Model for the participation of quasi-palindromic DNA sequences in frameshift mutation, Proc. Natl. Acad. Sci. U.S.A. 79, 4128-4132.
    • (1982) Proc. Natl. Acad. Sci. U.S.A. , vol.79 , pp. 4128-4132
    • Ripley, L.S.1
  • 19
    • 0032484153 scopus 로고    scopus 로고
    • Primer-template misalignments during leading strand DNA synthesis account for the most frequent spontaneous mutations in a quasipalindromic region in Escherichia coli
    • Rosche, W. A., Ripley, L. S., and Sinden, R. R. (1998) Primer-template misalignments during leading strand DNA synthesis account for the most frequent spontaneous mutations in a quasipalindromic region in Escherichia coli, J. Mol. Biol. 284, 633-646.
    • (1998) J. Mol. Biol. , vol.284 , pp. 633-646
    • Rosche, W.A.1    Ripley, L.S.2    Sinden, R.R.3
  • 20
    • 0031556020 scopus 로고    scopus 로고
    • Leading strand specific spontaneous mutation corrects a quasipalindrome by an intermolecular strand switch mechanism
    • Rosche, W. A., Trinh, T. Q., and Sinden, R. R. (1997) Leading strand specific spontaneous mutation corrects a quasipalindrome by an intermolecular strand switch mechanism, J. Mol. Biol. 269, 176-187.
    • (1997) J. Mol. Biol. , vol.269 , pp. 176-187
    • Rosche, W.A.1    Trinh, T.Q.2    Sinden, R.R.3
  • 21
    • 0035853297 scopus 로고    scopus 로고
    • Directionality of DNA replication fork movement strongly affects the generation of spontaneous mutations in Escherichia coli
    • Yoshiyama, K., Higuchi, K., Matsumura, H., and Maki, H. (2001) Directionality of DNA replication fork movement strongly affects the generation of spontaneous mutations in Escherichia coli, J. Mol. Biol. 307, 1195-206.
    • (2001) J. Mol. Biol. , vol.307 , pp. 1195-1206
    • Yoshiyama, K.1    Higuchi, K.2    Matsumura, H.3    Maki, H.4
  • 22
    • 0026334721 scopus 로고
    • Oligonucleotide capture during end joining in mammalian cells
    • Roth, D. B., Proctor, G. N., Stewart, L. K., and Wilson, J. H. (1991) Oligonucleotide capture during end joining in mammalian cells, Nucleic Acids Res. 19, 7201-7205.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 7201-7205
    • Roth, D.B.1    Proctor, G.N.2    Stewart, L.K.3    Wilson, J.H.4
  • 23
    • 0035679232 scopus 로고    scopus 로고
    • Recombinational DNA repair of damaged replication forks in Escherichia coli: Questions
    • Cox, M. M. (2001) Recombinational DNA Repair of Damaged Replication Forks in Escherichia Coli: Questions, Annu. Rev. Genet. 35, 53-82.
    • (2001) Annu. Rev. Genet. , vol.35 , pp. 53-82
    • Cox, M.M.1
  • 24
    • 0017298802 scopus 로고
    • A model for replication repair in mammalian cells
    • Higgins, N. P., Kato, K., and Strauss, B. (1976) A model for replication repair in mammalian cells, J. Mol. Biol. 101, 417-425.
    • (1976) J. Mol. Biol. , vol.101 , pp. 417-425
    • Higgins, N.P.1    Kato, K.2    Strauss, B.3
  • 25
    • 0033551662 scopus 로고    scopus 로고
    • Efficient processing of DNA ends during yeast nonhomologous end joining. Evidence for a DNA polymerase beta (Pol4)-dependent pathway
    • Wilson, T. E., and Lieber, M. R. (1999) Efficient processing of DNA ends during yeast nonhomologous end joining. Evidence for a DNA polymerase beta (Pol4)-dependent pathway, J. Biol. Chem. 274, 23599-23609.
    • (1999) J. Biol. Chem. , vol.274 , pp. 23599-23609
    • Wilson, T.E.1    Lieber, M.R.2
  • 26
    • 0347416710 scopus 로고    scopus 로고
    • Error-prone DNA polymerases: When making a mistake is the only way to get ahead
    • Rattray, A. J., and Strathern, J. N. (2003) Error-prone DNA polymerases: when making a mistake is the only way to get ahead, Annu. Rev. Genet. 37, 31-66.
    • (2003) Annu. Rev. Genet. , vol.37 , pp. 31-66
    • Rattray, A.J.1    Strathern, J.N.2
  • 27
    • 3042606214 scopus 로고    scopus 로고
    • Distinct requirements for Ku in N nucleotide addition at V(D)J- and non-V(D)J-generated double-strand breaks
    • Sandor, Z., Calicchio, M. L., Sargent, R. G., Roth, D. B., and Wilson, J. H. (2004) Distinct requirements for Ku in N nucleotide addition at V(D)J- and non-V(D)J-generated double-strand breaks, Nucleic Acids Res. 32, 1866-1873.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 1866-1873
    • Sandor, Z.1    Calicchio, M.L.2    Sargent, R.G.3    Roth, D.B.4    Wilson, J.H.5
  • 28
    • 0036091560 scopus 로고    scopus 로고
    • Distinct and opposite diversifying activities of terminal transferase splice variants
    • Thai, T. H., Purugganan, M. M., Roth, D. B., and Kearney, J. F. (2002) Distinct and opposite diversifying activities of terminal transferase splice variants, Nat. Immunol. 3, 457-462.
    • (2002) Nat. Immunol. , vol.3 , pp. 457-462
    • Thai, T.H.1    Purugganan, M.M.2    Roth, D.B.3    Kearney, J.F.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.