Identification of Tbr-1/CASK complex target genes in neurons

Journal of Neurochemistry

Volumn 91, Issue 6, 2004, Pages 1483-1492

  Wang, Ting Fang ^a   Ding, Chia Nung ^b,c   Wang, Guey Shin ^b   Luo, Shih Chi ^a   Lin, Yi Ling ^b,c   Ruan, Youlin ^d   Hevner, Robert ^e   Rubenstein, John L R ^d   Hsueh, Yi Ping ^b  

^a INSTITUTE OF BIOLOGICAL CHEMISTRY   (Taiwan)

^b INSTITUTE OF MOLECULAR BIOLOGY   (Taiwan)

^c NATIONAL YANG MING UNIVERSITY   (Taiwan)

^d UNIVERSITY OF CALIFORNIA   (United States)

^e UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

Author keywords

Development; Forebrain; Membrane associated guanylate kinase; N methyl D aspartate; Neurite; Transcription

Indexed keywords

AMINO ACID TRANSPORTER; COMPLEMENTARY DNA; GENOMIC DNA; GLYCINE; GUANYLATE KINASE; INTERLEUKIN 7 RECEPTOR; LUCIFERASE; MEMBRANE ASSOCIATED GUANYLATE KINASE; N METHYL DEXTRO ASPARTIC ACID RECEPTOR; RECEPTOR SUBUNIT; RNA; T BOX TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR TBR 1; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; BINDING SITE; BRAIN DEVELOPMENT; EMBRYO; ENZYME ASSAY; GENE OVEREXPRESSION; GENETIC TRANSCRIPTION; GENOTYPE; HIPPOCAMPUS; IMMUNOHISTOCHEMISTRY; KNOCKOUT MOUSE; MOUSE; NERVE CELL CULTURE; NERVOUS SYSTEM DEVELOPMENT; NONHUMAN; NUCLEOTIDE SEQUENCE; PHENOTYPE; PLASMID; PRIORITY JOURNAL; PROMOTER REGION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

AMINO ACID TRANSPORT SYSTEMS, NEUTRAL; ANIMALS; ANTIGENS, CD; ANTIGENS, SURFACE; BASE SEQUENCE; CA(2+)-CALMODULIN DEPENDENT PROTEIN KINASE; CELLS, CULTURED; CERCOPITHECUS AETHIOPS; COS CELLS; DNA-BINDING PROTEINS; EMBRYO; GENE EXPRESSION REGULATION; GLYCINE PLASMA MEMBRANE TRANSPORT PROTEINS; HIPPOCAMPUS; HUMANS; MICE; MICE, KNOCKOUT; MOLECULAR SEQUENCE DATA; NEURONS; PROMOTER REGIONS (GENETICS); RATS; RECEPTORS, INTERLEUKIN-7; RECEPTORS, N-METHYL-D-ASPARTATE;

ANIMALIA; EUKARYOTA; MAMMALIA;

EID: 10644230895     PISSN: 00223042     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1471-4159.2004.02845.x     Document Type: Article

References (34)

1. Adams R. H., Sato K., Shimada S., Tohyama M., Puschel A. W. and Betz H. (1995) Gene structure and glial expression of the glycine transporter GlyT1 in embryonic and adult rodents. J. Neurosci. 15, 2524-2532.
2. Bai G., Zhuang Z., Liu A., Chai Y. and Hoffman P. W. (2003) The role of the RE1 element in activation of the NR1 promoter during neuronal differentiation. J. Neurochem. 86, 992-1005.
3. Behar T. N., Scott C. A., Greene C. L., Wen X., Smith S. V., Maric D., Liu Q. Y., Colton C. A. and Barker J. L. (1999) Glutamate acting at NMDA receptors stimulates embryonic cortical neuronal migration. J. Neurosci. 19, 4449-4461.
4. Bulfone A., Smiga S. M., Shimamura K., Peterson A., Puelles L. and Rubenstein J. L. (1995) T-brain-1: a homolog of Brachyury whose expression defines molecularly distinct domains within the cerebral cortex. Neuron 15, 63-78.
5. Bulfone A., Wang F., Hevner R., Anderson S., Cutforth T., Chen S., Meneses J., Pedersen R., Axel R. and Rubenstein J. L. (1998) An olfactory sensory map develops in the absence of normal projection neurons or GABAergic interneurons. Neuron 21, 1273-1282.
6. Carreira S., Dexter T. J., Yavuzer U., Easty D. J. and Coding C. R. (1998) Brachyury-related transcription factor Tbx2 and repression of the melanocyte-specific TRP-1 promoter. Mol. Cell Biol. 18, 5099-5108.
7. Casey E. S., O'Reilly M. A., Conlon F. L. and Smith J. C. (1998) The T-box transcription factor Brachyury regulates expression of eFGF through binding to a non-palindromic response element. Development 125, 3887-3894.
8. Casey E. S., Tada M., Fairclough L., Wylie C. C., Heasman J. and Smith J. C. (1999) Bix4 is activated directly by VegT and mediates endoderm formation in Xenopus development. Development 126, 4193-4200.
9. Herkert M., Rottger S. and Becker C. M. (1998) The NMDA receptor subunit NR2B of neonatal rat brain: complex formation and enrichment in axonal growth cones. Eur. J. Neurosci. 10, 1553-1562.
10. Hevner R. F., Shi L., Justice N. et al (2001) Tbr1 regulates differentiation of the preplate and layer 6. Neuron 29, 353-366.
11. Hsueh Y. P. and Lai M. Z. (1995) Overexpression of activation transcriptional factor 1 in lymphomas and in activated lymphocytes. J. Immunol. 154, 5675-5683.
12. Hsueh Y. P. and Sheng M. (1999a) Regulated expression and subcellular localization of syndecan heparan sulfate proteoglycans and the syndecan-binding protein CASK/LIN-2 during rat brain development. J. Neurosci. 19, 7415-7425.
13. Hsueh Y. P. and Sheng M. (1999b) Requirement of N-terminal cysteines of PSD-95 for PSD-95 multimerization and ternary complex formation, but not for binding to potassium channel Kv 1.4. J. Biol. Chem. 274, 532-536.
14. Hsueh Y. P., Wang T. F., Yang F. C. and Sheng M. (2000) Nuclear translocation and transcription regulation by the membrane-associated guanylate kinase CASK/LIN-2. Nature 404, 298-302.
15. Kispert A. and Herrmann B. G. (1993) The Brachyury gene encodes a novel DNA binding protein. EMBO J. 12, 3211-3220.
16. Klein M., Pieri I., Uhlmann F., Pfizenmaier K. and Eisel U. (1998) Cloning and characterization of promoter and 5′-UTR of the NMDA receptor subunit epsilon 2: evidence for alternative splicing of 5′-non-coding exon. Gene 208, 259-269.
17. Liu A., Hoffman P. W., Lu W. and Bai G. (2004) NF-kappaB site interacts with Sp factors and up-regulates the NR1 promoter during neuronal differentiation. J. Biol. Chem. 279, 17 449-17 458.
18. Loftis J. M. and Janowsky A. (2003) The N-methyl-D-aspartate receptor subunit NR2B: localization, functional properties, regulation, and clinical implications. Pharmacol. Ther 97, 55-85.
19. Monyer H., Burnashev N., Laurie D. J., Sakmann B. and Seeburg P. H. (1994) Developmental and regional expression in the rat brain and functional properties of four NMDA receptors. Neuron 12, 529-540.
20. Morris R. J. and Beech J. N. (1987) Sequential expression of OX2 and Thy-1 glycoproteins on the neuronal surface during development: an immunohistochemical study of rat cerebellum. Dev. Neurosci. 9, 33-44.
21. Muller C. W. and Herrmann B. G. (1997) Crystallographic structure of the T domain-DNA complex of the Brachyury transcription factor. Nature 389, 884-888.
22. Myers S. J., Dingledine R. and Borges K. (1999) Genetic regulation of glutamate receptor ion channels. Annu. Rev. Pharmacol. Toxicol. 39, 221-241.
23. Ogawa M., Miyata T., Nakajima K., Yagyu K., Seike M., Ikenaka K., Yamamoto H. and Mikoshiba K. (1995) The reeler gene-associated antigen on Cajal-Retzius neurons is a crucial molecule for laminar organization of cortical neurons. Neuron 14, 899-912.
24. Rice D. S. and Curran T. (2001) Role of the reelin signaling pathway in central nervous system development. Annu. Rev. Neurosci. 24, 1005-1039.
25. Sasner M. and Buonanno A. (1996) Distinct N-methyl-D-aspartate receptor 2B subunit gene sequences confer neural and developmental specific expression. J. Biol. Chem. 271, 21 316-21 322.
26. Senzaki K., Ogawa M. and Yagi T. (1999) Proteins of the CNR family are multiple receptors for Reelin. Cell 99, 635-647.
27. Shih Y. P., Kung W. M., Chen J. C., Yeh C. H., Wang A. H. and Wang T. F. (2002) High-throughput screening of soluble recombinant proteins. Protein Sci. 11, 1714-1719.
28. Smith J. (1999) T-box genes: what they do and how they do it. Trends Genet 15, 154-158.
29. Suzuki S. T. (2000) Recent progress in protocadherin research. Exp. Cell Res. 261, 13-18.
30. Tada M., Casey E. S., Fairclough L., Smith J. C., O'Reilly M. A. and Conlon F. L. (1998) Bix1, a direct target of Xenopus T-box genes, causes formation of ventral mesoderm and endoderm. Development 125, 3997-4006.
31. Tissir F. and Goffinet A. M. (2003) Reelin and brain development. Nat. Rev. Neurosci. 4, 496-505.
32. Wang G. S., Hong C. J., Yen T. Y. et al. (2004) Transcriptional Modification by a CASK, interacting nucleosome assembly protein. Neuron 42, 113-128.
33. Webb M. and Barclay A. N. (1984) Localisation of the MRC OX-2 glycoprotein on the surfaces of neurones. J. Neurochem. 43, 1061-1067.
34. Zeng G. (1998) Sticky-end PCR: new method for subcloning. Biotechniques 25, 206-208.