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Volumn 126, Issue 5, 2004, Pages 1430-1436

Selective Activation of Two Sites in RNA by Acridine-Bearing Oligonucleotides for Clipping of Designated RNA Fragments

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL ACTIVATION; ENZYMES; HYDROLYSIS; MASS SPECTROMETRY; RARE EARTH ELEMENTS;

EID: 1042276602     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja0389568     Document Type: Article
Times cited : (23)

References (48)
  • 18
    • 0023364038 scopus 로고
    • (a) Cech, T. R. Science 1987, 236, 1532-1539,
    • (1987) Science , vol.236 , pp. 1532-1539
    • Cech, T.R.1
  • 21
    • 0034651754 scopus 로고    scopus 로고
    • Two-site scissions of specific sequences by hairpin-derived twin ribozymes have been reported: (a) Schmidt, C.; Welz, R.; Müller, S. Nucleic Acids Res. 2000, 28, 886-894.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 886-894
    • Schmidt, C.1    Welz, R.2    Müller, S.3
  • 23
    • 0032997217 scopus 로고    scopus 로고
    • Brookes, A. J. Gene 1999, 234, 177-186.
    • (1999) Gene , vol.234 , pp. 177-186
    • Brookes, A.J.1
  • 43
    • 1042270753 scopus 로고    scopus 로고
    • note
    • 1G simply to facilitate the analysis. The labeling by either FAM or TMR was not employed here. The products were desalted as described in the Experimental Section and directly subjected to the MALDI-TOF MS.
  • 44
    • 33751386124 scopus 로고
    • The RNA in DNA/RNA duplexes is considerably stable against the digestion by lanthanide ions: Kolasa, K. A.; Morrow, J. R.; Sharma, A. P. Inorg. Chem. 1993, 32, 3983-3984.
    • (1993) Inorg. Chem. , vol.32 , pp. 3983-3984
    • Kolasa, K.A.1    Morrow, J.R.2    Sharma, A.P.3
  • 45
    • 1042282250 scopus 로고    scopus 로고
    • note
    • The site-selective scission was successful even when the target nucleotide in RNA was abasic (see Supporting Information).
  • 46
    • 0037459524 scopus 로고    scopus 로고
    • Another solution to this problem is to use nonnatural nucleotide dP, which forms stable base pairs both with G and with A through its tautomerism (see Kuzuya, A.; Mizoguchi, R.; Morisawa, F.; Komiyama, M. Chem. Commun. 2003, 770-771).
    • (2003) Chem. Commun. , pp. 770-771
    • Kuzuya, A.1    Mizoguchi, R.2    Morisawa, F.3    Komiyama, M.4
  • 47
    • 1042293869 scopus 로고    scopus 로고
    • note
    • To discriminate C/U(T) alteration in genomes, the most appropriate way is to use the complementary strand (sense or antisense strand) as the template for in vitro transcription. Then this alteration can be analyzed in terms of G/ A alteration, which gives rise to a mass difference of 16 (the difference between C and U is ca. 1).


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.