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Volumn 545, Issue 1-2, 2004, Pages 73-80

Individual variation in microsatellite mutation rate in barn swallows

Author keywords

Barn swallow; Germline mutation; Inbreeding; Microsatellite; Mutation rate; Repeat

Indexed keywords

MICROSATELLITE DNA;

EID: 0348047541     PISSN: 00275107     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mrfmmm.2003.09.012     Document Type: Article
Times cited : (22)

References (56)
  • 1
    • 0035865239 scopus 로고    scopus 로고
    • Evolutionary analyses of the human genome
    • Li W.H., Gu Z., Wang H., Nekrutenko A. Evolutionary analyses of the human genome. Nature. 409:2001;847-849.
    • (2001) Nature , vol.409 , pp. 847-849
    • Li, W.H.1    Gu, Z.2    Wang, H.3    Nekrutenko, A.4
  • 2
    • 0036737595 scopus 로고    scopus 로고
    • Deterministic mutation rate variation in the human genome
    • Smith N.G., Webster M.T., Ellegren H. Deterministic mutation rate variation in the human genome. Genome Res. 12:2002;1350-1356.
    • (2002) Genome Res. , vol.12 , pp. 1350-1356
    • Smith, N.G.1    Webster, M.T.2    Ellegren, H.3
  • 3
    • 0036640951 scopus 로고    scopus 로고
    • Human SNP variability and mutation rate are higher in regions of high recombination
    • Lercher M.J., Hurst L.D. Human SNP variability and mutation rate are higher in regions of high recombination. Trends Genet. 18:2002;337-340.
    • (2002) Trends Genet. , vol.18 , pp. 337-340
    • Lercher, M.J.1    Hurst, L.D.2
  • 5
    • 0035546157 scopus 로고    scopus 로고
    • Gene expression and molecular evolution
    • Akashi H. Gene expression and molecular evolution. Curr. Opin. Genet. Dev. 11:2001;660-666.
    • (2001) Curr. Opin. Genet. Dev. , vol.11 , pp. 660-666
    • Akashi, H.1
  • 6
    • 0027161022 scopus 로고
    • Mutation of human short tandem repeats
    • Weber J.L., Wong C. Mutation of human short tandem repeats. Hum. Mol. Genet. 2:1993;1123-1128.
    • (1993) Hum. Mol. Genet. , vol.2 , pp. 1123-1128
    • Weber, J.L.1    Wong, C.2
  • 7
    • 0021711842 scopus 로고
    • Characterization of genomic poly(dT-dG)·poly(dC-dA) sequences: Structure, organization, and conformation
    • Hamada H., Petrino M.G., Kakunaga T., Seidman M., Stollar B.D. Characterization of genomic poly(dT-dG)·poly(dC-dA) sequences: structure, organization, and conformation. Mol. Cell. Biol. 4:1984;2610-2621.
    • (1984) Mol. Cell. Biol. , vol.4 , pp. 2610-2621
    • Hamada, H.1    Petrino, M.G.2    Kakunaga, T.3    Seidman, M.4    Stollar, B.D.5
  • 8
    • 0019955810 scopus 로고
    • Potential Z-DNA forming sequences are highly dispersed in the human genome
    • Hamada H., Kakunaga T. Potential Z-DNA forming sequences are highly dispersed in the human genome. Nature. 298:1982;396-398.
    • (1982) Nature , vol.298 , pp. 396-398
    • Hamada, H.1    Kakunaga, T.2
  • 9
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • International Human Genome Sequencing Consortium, Initial sequencing and analysis of the human genome, Nature 409 (2001) 860-921.
    • (2001) Nature , vol.409 , pp. 860-921
  • 10
    • 0024514081 scopus 로고
    • A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene
    • Litt M., Luty J.A. A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. Am. J. Hum. Genet. 44:1989;397-401.
    • (1989) Am. J. Hum. Genet. , vol.44 , pp. 397-401
    • Litt, M.1    Luty, J.A.2
  • 11
    • 0024387394 scopus 로고
    • Hypervariability of simple sequences as a general source for polymorphic DNA markers
    • Tautz D. Hypervariability of simple sequences as a general source for polymorphic DNA markers. Nucleic Acids Res. 17:1989;6463-6471.
    • (1989) Nucleic Acids Res. , vol.17 , pp. 6463-6471
    • Tautz, D.1
  • 12
    • 0024582686 scopus 로고
    • Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction
    • Weber J.L., May P.E. Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am. J. Hum. Genet. 44:1989;388-396.
    • (1989) Am. J. Hum. Genet. , vol.44 , pp. 388-396
    • Weber, J.L.1    May, P.E.2
  • 13
    • 0033808899 scopus 로고    scopus 로고
    • Evolutionary dynamics of microsatellite DNA
    • Schlötterer C. Evolutionary dynamics of microsatellite DNA. Chromosoma. 109:2000;365-371.
    • (2000) Chromosoma , vol.109 , pp. 365-371
    • Schlötterer, C.1
  • 14
    • 0034564097 scopus 로고    scopus 로고
    • Microsatellite mutations in the germline: Implications for evolutionary inference
    • Ellegren H. Microsatellite mutations in the germline: implications for evolutionary inference. Trends Genet. 16:2000;551-558.
    • (2000) Trends Genet. , vol.16 , pp. 551-558
    • Ellegren, H.1
  • 15
    • 0030035824 scopus 로고    scopus 로고
    • Directional evolution in germline microsatellite mutations
    • Primmer C.R., Saino N., Møller A.P., Ellegren H. Directional evolution in germline microsatellite mutations. Nat. Genet. 13:1996;391-393.
    • (1996) Nat. Genet. , vol.13 , pp. 391-393
    • Primmer, C.R.1    Saino, N.2    Møller, A.P.3    Ellegren, H.4
  • 16
    • 0030017038 scopus 로고    scopus 로고
    • Microsatellites show mutational bias and heterozygote instability
    • Amos W., Sawcer S.J., Feakes R.W., Rubinsztein D.C. Microsatellites show mutational bias and heterozygote instability. Nat. Genet. 13:1996;390-391.
    • (1996) Nat. Genet. , vol.13 , pp. 390-391
    • Amos, W.1    Sawcer, S.J.2    Feakes, R.W.3    Rubinsztein, D.C.4
  • 17
    • 17344380921 scopus 로고    scopus 로고
    • Long microsatellite alleles in Drosophila melanogaster have a downward mutation bias and short persistence times, which cause their genome-wide underrepresentation
    • Harr B., Schlötterer C. Long microsatellite alleles in Drosophila melanogaster have a downward mutation bias and short persistence times, which cause their genome-wide underrepresentation. Genetics. 155:2000;1213-1220.
    • (2000) Genetics , vol.155 , pp. 1213-1220
    • Harr, B.1    Schlötterer, C.2
  • 18
    • 0034079715 scopus 로고    scopus 로고
    • Heterogeneous mutation processes in human microsatellite DNA sequences
    • Ellegren H. Heterogeneous mutation processes in human microsatellite DNA sequences. Nat. Genet. 24:2000;400-402.
    • (2000) Nat. Genet. , vol.24 , pp. 400-402
    • Ellegren, H.1
  • 19
    • 0034111151 scopus 로고    scopus 로고
    • The direction of microsatellite mutations is dependent upon allele length
    • Xu X., Peng M., Fang Z. The direction of microsatellite mutations is dependent upon allele length. Nat. Genet. 24:2000;396-399.
    • (2000) Nat. Genet. , vol.24 , pp. 396-399
    • Xu, X.1    Peng, M.2    Fang, Z.3
  • 21
    • 0031880362 scopus 로고    scopus 로고
    • Unraveling the processes of microsatellite evolution through analysis of germline mutations in barn swallows (Hirundo rustica)
    • Primmer C., Saino N., Møller A., Ellegren H. Unraveling the processes of microsatellite evolution through analysis of germline mutations in barn swallows (Hirundo rustica). Mol. Biol. Evol. 15:1998;1047-1054.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1047-1054
    • Primmer, C.1    Saino, N.2    Møller, A.3    Ellegren, H.4
  • 22
    • 0031704550 scopus 로고    scopus 로고
    • High mutation rate of a long microsatellite allele in Drosophila melanogaster provides evidence for allele-specific mutation rates
    • Schlötterer C., Ritter R., Harr B., Brem G. High mutation rate of a long microsatellite allele in Drosophila melanogaster provides evidence for allele-specific mutation rates. Mol. Biol. Evol. 15:1998;1269-1274.
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 1269-1274
    • Schlötterer, C.1    Ritter, R.2    Harr, B.3    Brem, G.4
  • 23
    • 0025157834 scopus 로고
    • Informativeness of human (dC-dA)n·(dG-dT)n polymorphisms
    • Weber J.L. Informativeness of human (dC-dA)n·(dG-dT)n polymorphisms. Genomics. 7:1990;524-530.
    • (1990) Genomics , vol.7 , pp. 524-530
    • Weber, J.L.1
  • 24
    • 0031778070 scopus 로고    scopus 로고
    • Mutation rate in human microsatellites: Influence of the structure and length of the tandem repeat
    • Brinkmann B., Klintschar M., Neuhuber F., Huhne J., Rolf B. Mutation rate in human microsatellites: influence of the structure and length of the tandem repeat. Am. J. Hum. Genet. 62:1998;1408-1415.
    • (1998) Am. J. Hum. Genet. , vol.62 , pp. 1408-1415
    • Brinkmann, B.1    Klintschar, M.2    Neuhuber, F.3    Huhne, J.4    Rolf, B.5
  • 25
    • 0035994570 scopus 로고    scopus 로고
    • Multiple paternity and female-biased mutation at a microsatellite locus in the olive ridley sea turtle (Lepidochelys olivacea)
    • Hoekert W.E., Neufeglise H., Schouten A.D., Menken S.B. Multiple paternity and female-biased mutation at a microsatellite locus in the olive ridley sea turtle (Lepidochelys olivacea). Heredity. 89:2002;107-113.
    • (2002) Heredity , vol.89 , pp. 107-113
    • Hoekert, W.E.1    Neufeglise, H.2    Schouten, A.D.3    Menken, S.B.4
  • 26
    • 0037230107 scopus 로고    scopus 로고
    • Microsatellite evolution at two hypervariable loci revealed by extensive avian pedigrees
    • Beck N.R., Double M.C., Cockburn A. Microsatellite evolution at two hypervariable loci revealed by extensive avian pedigrees. Mol. Biol. Evol. 20:2003;54-61.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 54-61
    • Beck, N.R.1    Double, M.C.2    Cockburn, A.3
  • 27
    • 0030478158 scopus 로고    scopus 로고
    • Mutation rate varies among alleles at a microsatellite locus: Phylogenetic evidence
    • Jin L., Macaubas C., Hallmayer J., Kimura A., Mignot E. Mutation rate varies among alleles at a microsatellite locus: phylogenetic evidence. Proc. Natl. Acad. Sci. U.S.A. 93:1996;15285-15288.
    • (1996) Proc. Natl. Acad. Sci. U.S.A. , vol.93 , pp. 15285-15288
    • Jin, L.1    MacAubas, C.2    Hallmayer, J.3    Kimura, A.4    Mignot, E.5
  • 28
    • 0033611501 scopus 로고    scopus 로고
    • High genomic deleterious mutation rates in hominids
    • Eyre-Walker A., Keightley P.D. High genomic deleterious mutation rates in hominids. Nature. 397:1999;344-347.
    • (1999) Nature , vol.397 , pp. 344-347
    • Eyre-Walker, A.1    Keightley, P.D.2
  • 30
    • 0029346978 scopus 로고
    • Resolving genetic relationships with microsatellite markers: A parentage testing system for the swallow Hirundo rustica
    • Primmer C.R., Møller A.P., Ellegren H. Resolving genetic relationships with microsatellite markers: a parentage testing system for the swallow Hirundo rustica. Mol. Ecol. 4:1995;493-498.
    • (1995) Mol. Ecol. , vol.4 , pp. 493-498
    • Primmer, C.R.1    Møller, A.P.2    Ellegren, H.3
  • 31
    • 0036567508 scopus 로고    scopus 로고
    • Heterogeneity in the rate and pattern of germline mutation at individual microsatellite loci
    • Brohede J., Primmer C.R., Møller A., Ellegren H. Heterogeneity in the rate and pattern of germline mutation at individual microsatellite loci. Nucleic Acids Res. 30:2002;1997-2003.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1997-2003
    • Brohede, J.1    Primmer, C.R.2    Møller, A.3    Ellegren, H.4
  • 33
    • 0029796682 scopus 로고    scopus 로고
    • New microsatellites from the pied flycatcher Ficedula hypoleuca and the swallow Hirundo rustica genomes
    • Primmer C.R., Møller A.P., Ellegren H. New microsatellites from the pied flycatcher Ficedula hypoleuca and the swallow Hirundo rustica genomes. Hereditas. 124:1996;281-283.
    • (1996) Hereditas , vol.124 , pp. 281-283
    • Primmer, C.R.1    Møller, A.P.2    Ellegren, H.3
  • 34
    • 0027057407 scopus 로고
    • Adjusted P-values for simultaneous inference
    • Wright S.P. Adjusted P-values for simultaneous inference. Biometrics. 48:1992;1005-1013.
    • (1992) Biometrics , vol.48 , pp. 1005-1013
    • Wright, S.P.1
  • 35
    • 0029132519 scopus 로고
    • Practical considerations in the use of simultaneous inference for multiple tests
    • Chandler C.R. Practical considerations in the use of simultaneous inference for multiple tests. Anim. Behav. 49:1995;524-527.
    • (1995) Anim. Behav. , vol.49 , pp. 524-527
    • Chandler, C.R.1
  • 36
    • 0001147113 scopus 로고
    • Parametric measures of effect size
    • H. Cooper, L.V. Hedges (Eds.), Sage, New York
    • R. Rosenthal, Parametric measures of effect size, in: H. Cooper, L.V. Hedges (Eds.), The Handbook of Research Synthesis, Sage, New York, 1994, pp. 231-244.
    • (1994) The Handbook of Research Synthesis , pp. 231-244
    • Rosenthal, R.1
  • 37
    • 0033842067 scopus 로고    scopus 로고
    • Genetic and environmental components of phenotypic variation in immune response and body size of a colonial bird, Delichon urbica (the house martin)
    • Christe P., Moller A.P., Saino N., De Lope F. Genetic and environmental components of phenotypic variation in immune response and body size of a colonial bird, Delichon urbica (the house martin). Heredity. 85:2000;75-83.
    • (2000) Heredity , vol.85 , pp. 75-83
    • Christe, P.1    Moller, A.P.2    Saino, N.3    De Lope, F.4
  • 38
    • 0020838397 scopus 로고
    • Evaluation of the heterophil/lymphocyte ratio as a measure of stress in chickens
    • Gross W.B., Siegel H.S. Evaluation of the heterophil/lymphocyte ratio as a measure of stress in chickens. Avian Dis. 27:1983;972-979.
    • (1983) Avian Dis. , vol.27 , pp. 972-979
    • Gross, W.B.1    Siegel, H.S.2
  • 39
    • 0002675811 scopus 로고
    • Hematology
    • G.J. Harrison, W.R. Harrison (Eds.), Saunders, London
    • J. Dein, Hematology, in: G.J. Harrison, W.R. Harrison (Eds.), Clinical Avian Medicine, Saunders, London, 1986, pp. 174-191.
    • (1986) Clinical Avian Medicine , pp. 174-191
    • Dein, J.1
  • 40
    • 84972208852 scopus 로고
    • Avian blood leucocyte responses to stress
    • Maxwell M.H. Avian blood leucocyte responses to stress. World Poultry Sci. J. 49:1993;34-43.
    • (1993) World Poultry Sci. J. , vol.49 , pp. 34-43
    • Maxwell, M.H.1
  • 42
    • 0032493020 scopus 로고    scopus 로고
    • Birth weight and neonatal survival of harbour seal pups are positively correlated with genetic variation measured by microsatellites
    • Coltman D.W., Bowen W.D., Wright J.M. Birth weight and neonatal survival of harbour seal pups are positively correlated with genetic variation measured by microsatellites. Proc. R. Soc. Lond. B. 265:1998;803-809.
    • (1998) Proc. R. Soc. Lond. B. , vol.265 , pp. 803-809
    • Coltman, D.W.1    Bowen, W.D.2    Wright, J.M.3
  • 43
    • 0034742813 scopus 로고    scopus 로고
    • Evaluation of d2, a microsatellite measure of inbreeding and outbreeding, in wolves with a known pedigree
    • Hedrick P., Fredrickson R., Ellegren H. Evaluation of d2, a microsatellite measure of inbreeding and outbreeding, in wolves with a known pedigree. Evolution. 55:2001;1256-1260.
    • (2001) Evolution , vol.55 , pp. 1256-1260
    • Hedrick, P.1    Fredrickson, R.2    Ellegren, H.3
  • 44
    • 0030267842 scopus 로고    scopus 로고
    • Clusters of identical new mutation in the evolutionary landscape
    • Woodruff R.C., Huai H., Thompson J.N. Jr. Clusters of identical new mutation in the evolutionary landscape. Genetica. 98:1996;149-160.
    • (1996) Genetica , vol.98 , pp. 149-160
    • Woodruff, R.C.1    Huai, H.2    Thompson Jr., J.N.3
  • 47
    • 0023256559 scopus 로고
    • Slipped-strand mispairing: A major mechanism for DNA sequence evolution
    • Levinson G., Gutman G.A. Slipped-strand mispairing: a major mechanism for DNA sequence evolution. Mol. Biol. Evol. 4:1987;203-221.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 203-221
    • Levinson, G.1    Gutman, G.A.2
  • 48
    • 0037173031 scopus 로고    scopus 로고
    • Microsatellite evolution inferred from human-chimpanzee genomic sequence alignments
    • Webster M.T., Smith N.G., Ellegren H. Microsatellite evolution inferred from human-chimpanzee genomic sequence alignments. Proc. Natl. Acad. Sci. U.S.A. 99:2002;8748-8753.
    • (2002) Proc. Natl. Acad. Sci. U.S.A. , vol.99 , pp. 8748-8753
    • Webster, M.T.1    Smith, N.G.2    Ellegren, H.3
  • 50
    • 0036568595 scopus 로고    scopus 로고
    • The correlation between inbreeding and fitness: Does allele size matter?
    • Goudet J., Keller L. The correlation between inbreeding and fitness: does allele size matter? Trends Ecol. Evol. 17:2002;201-202.
    • (2002) Trends Ecol. Evol. , vol.17 , pp. 201-202
    • Goudet, J.1    Keller, L.2
  • 51
    • 0036187106 scopus 로고    scopus 로고
    • Comparing molecular measures for detecting inbreeding depression
    • Slate J., Pemberton J.M. Comparing molecular measures for detecting inbreeding depression. J. Evol. Biol. 15:2002;20-31.
    • (2002) J. Evol. Biol. , vol.15 , pp. 20-31
    • Slate, J.1    Pemberton, J.M.2
  • 52
    • 0030955296 scopus 로고    scopus 로고
    • Trade-off between parasitoid resistance and larval competitive ability in Drosophila melanogaster
    • Kraaijeveld A.R., Godfray H.C. Trade-off between parasitoid resistance and larval competitive ability in Drosophila melanogaster. Nature. 389:1997;278-280.
    • (1997) Nature , vol.389 , pp. 278-280
    • Kraaijeveld, A.R.1    Godfray, H.C.2
  • 53
    • 0034634372 scopus 로고    scopus 로고
    • Survival for immunity: The price of immune system activation for bumblebee workers
    • Moret Y., Schmid-Hempel P. Survival for immunity: the price of immune system activation for bumblebee workers. Science. 290:2000;1166-1168.
    • (2000) Science , vol.290 , pp. 1166-1168
    • Moret, Y.1    Schmid-Hempel, P.2
  • 54
    • 0037218085 scopus 로고    scopus 로고
    • On the evolutionary ecology of specific immune defence
    • Schmid-Hempel P., Ebert D. On the evolutionary ecology of specific immune defence. Trends Ecol. Evol. 18:2003;27-32.
    • (2003) Trends Ecol. Evol. , vol.18 , pp. 27-32
    • Schmid-Hempel, P.1    Ebert, D.2
  • 55
    • 0034303523 scopus 로고    scopus 로고
    • The origins, patterns and implications of human spontaneous mutation
    • Crow J.F. The origins, patterns and implications of human spontaneous mutation. Nat. Rev. Genet. 1:2000;40-47.
    • (2000) Nat. Rev. Genet. , vol.1 , pp. 40-47
    • Crow, J.F.1
  • 56
    • 0032814845 scopus 로고    scopus 로고
    • Clustered microsatellite mutations in the pipefish Syngnathus typhle
    • Jones A.G., Rosenqvist G., Berglund A., Avise J.C. Clustered microsatellite mutations in the pipefish Syngnathus typhle. Genetics. 152:1999;1057-1063.
    • (1999) Genetics , vol.152 , pp. 1057-1063
    • Jones, A.G.1    Rosenqvist, G.2    Berglund, A.3    Avise, J.C.4


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