-
1
-
-
0037144404
-
Cysteine activation is an inherent in vivo property of prolyl-tRNA synthetases
-
Ahel, I., C. Stathopoulos, A. Ambrogelly, A. Sauerwald, H. Toogood,T. Hartsch, and D. Söll. 2002. Cysteine activation is an inherent in vivo property of prolyl-tRNA synthetases. J. Biol. Chem. 277:34743-34748.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 34743-34748
-
-
Ahel, I.1
Stathopoulos, C.2
Ambrogelly, A.3
Sauerwald, A.4
Toogood, H.5
Hartsch, T.6
Söll, D.7
-
2
-
-
0030801002
-
Gapped Blast and Psi-Blast: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schaeffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped Blast and Psi-Blast: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaeffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0036330799
-
Functional annotation of class I lysyl-tRNA synthetase phylogeny indicates a limited role for gene transfer
-
Ambrogelly, A., D. Korencic, and M. Ibba. 2002. Functional annotation of class I lysyl-tRNA synthetase phylogeny indicates a limited role for gene transfer. J. Bacteriol. 184:4594-4600.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 4594-4600
-
-
Ambrogelly, A.1
Korencic, D.2
Ibba, M.3
-
4
-
-
0037144402
-
Pro with cysteine
-
Pro with cysteine. J. Biol. Chem. 277:34749-34754.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 34749-34754
-
-
Ambrogelly, A.1
Ahel, I.2
Polycarpo, C.3
Bunjun-Srihari, S.4
Krett, B.5
Jacquin-Becker, C.6
Ruan, B.7
Kohrer, C.8
Stathopoulos, C.9
RajBhandary, U.10
Söll, D.11
-
5
-
-
0032573150
-
Thermus thermophilus: A link in evolution of the tRNA-dependent amino acid amidation pathways
-
Becker, H. D., and D. Kern. 1998. Thermus thermophilus: A link in evolution of the tRNA-dependent amino acid amidation pathways. Proc. Natl. Acad. Sci. USA 95:12832-12837.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 12832-12837
-
-
Becker, H.D.1
Kern, D.2
-
6
-
-
0033977581
-
The ASTRAL compendium for structure and sequence analysis
-
Benner, S. E., P. Koehl, and M. Levitt. 2000. The ASTRAL compendium for structure and sequence analysis. Nucleic Acids Res. 28:254-256.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 254-256
-
-
Benner, S.E.1
Koehl, P.2
Levitt, M.3
-
7
-
-
0032525301
-
The crystal structure of asparaginyl-tRNA synthetase from Thermus thermophilus and its complexes with ATP and asparginy-adenylate: The mechanism of discrimination between asparagine and aspartic acid
-
Berthet-Colominas, C., L. Seignovert, M. Hartlein, M. Grotli, S. Cusack, and R. Leberman. 1998. The crystal structure of asparaginyl-tRNA synthetase from Thermus thermophilus and its complexes with ATP and asparginy-adenylate: the mechanism of discrimination between asparagine and aspartic acid. EMBO J. 17:2947-2960.
-
(1998)
EMBO J.
, vol.17
, pp. 2947-2960
-
-
Berthet-Colominas, C.1
Seignovert, L.2
Hartlein, M.3
Grotli, M.4
Cusack, S.5
Leberman, R.6
-
8
-
-
0035937260
-
Pairwise sequence alignment below the twilight zone
-
Blake, J. D., and F. E. Cohen. 2001. Pairwise sequence alignment below the twilight zone. J. Mol. Biol. 307:721-735.
-
(2001)
J. Mol. Biol.
, vol.307
, pp. 721-735
-
-
Blake, J.D.1
Cohen, F.E.2
-
9
-
-
0030788417
-
Evidence for the early divergence of tryptophanyl-and tyrosyl-tRNA synthetases
-
Brown, J. R., F. Robb, R. Weiss, and W. F. Doolittle. 1997. Evidence for the early divergence of tryptophanyl-and tyrosyl-tRNA synthetases. J. Mol. Evol. 45:9-16.
-
(1997)
J. Mol. Evol.
, vol.45
, pp. 9-16
-
-
Brown, J.R.1
Robb, F.2
Weiss, R.3
Doolittle, W.F.4
-
10
-
-
0028941917
-
Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications
-
Brown, J. R., and W. F. Doolittle. 1995. Root of the universal tree of life based on ancient aminoacyl-tRNA synthetase gene duplications. Proc. Natl. Acad. Sci. USA 92:2441-2445.
-
(1995)
Proc. Natl. Acad. Sci. USA
, vol.92
, pp. 2441-2445
-
-
Brown, J.R.1
Doolittle, W.F.2
-
11
-
-
0032844737
-
Gene descent, duplication and horizontal transfer in the evolution of glutamyl- and glutaminyl-tRNA synthetases
-
Brown, J. R., and W. F. Doolittle. 1999. Gene descent, duplication and horizontal transfer in the evolution of glutamyl- and glutaminyl-tRNA synthetases. J. Mol. Evol. 49:485-495.
-
(1999)
J. Mol. Evol.
, vol.49
, pp. 485-495
-
-
Brown, J.R.1
Doolittle, W.F.2
-
12
-
-
16044367245
-
Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
-
Bult, C. J., O. White, G. J. Olsen, L. Zhou, R. D. Fleischmann, G. G. Sutton, J. A. Blake, L. M. FitzGerald, R. A. Clayton, J. D. Gocayne, A. R. Kerlavage, B. A. Dougherty, J. Tomb, M. D. Adams, C. I. Reich, R. Overbeek, E. F. Kirkness, K. G. Weinstock, J. M. Merrick, A. Glodek, J. L. Scott, N. S. M. Geoghagen, J. F. Weidman, J. L. Fuhrmann, D. Nguyen, T. R. Utterback, J. M. Kelley, J. D. Peterson, P. W. Sadow, M. C. Hanna, M. D. Cotton, K. M. Roberts, M. A. Hurst, B. P. Kaine, M. Borodovsky, H. Klenk, C. M. Fraser, H. O. Smith, C. R. Woese, and J. C. Venter. 1996. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science 273:1058-1073.
-
(1996)
Science
, vol.273
, pp. 1058-1073
-
-
Bult, C.J.1
White, O.2
Olsen, G.J.3
Zhou, L.4
Fleischmann, R.D.5
Sutton, G.G.6
Blake, J.A.7
FitzGerald, L.M.8
Clayton, R.A.9
Gocayne, J.D.10
Kerlavage, A.R.11
Dougherty, B.A.12
Tomb, J.13
Adams, M.D.14
Reich, C.I.15
Overbeek, R.16
Kirkness, E.F.17
Weinstock, K.G.18
Merrick, J.M.19
Glodek, A.20
Scott, J.L.21
Geoghagen, N.S.M.22
Weidman, J.F.23
Fuhrmann, J.L.24
Nguyen, D.25
Utterback, T.R.26
Kelley, J.M.27
Peterson, J.D.28
Sadow, P.W.29
Hanna, M.C.30
Cotton, M.D.31
Roberts, K.M.32
Hurst, M.A.33
Kaine, B.P.34
Borodovsky, M.35
Klenk, H.36
Fraser, C.M.37
Smith, H.O.38
Woese, C.R.39
Venter, J.C.40
more..
-
13
-
-
0037390217
-
Non-discriminating and discriminating aspartyl-tRNA synthetases differ in the anticodon-binding domain
-
Charron, C., H. Roy, M. Blaise, R. Giege, and D. Kern. 2003. Non-discriminating and discriminating aspartyl-tRNA synthetases differ in the anticodon-binding domain. EMBO J. 22:1632-1643.
-
(2003)
EMBO J.
, vol.22
, pp. 1632-1643
-
-
Charron, C.1
Roy, H.2
Blaise, M.3
Giege, R.4
Kern, D.5
-
14
-
-
0022706389
-
The relation between the divergence of sequence and structure in proteins
-
Chothia, C., and A. M. Lesk. 1986. The relation between the divergence of sequence and structure in proteins. EMBO J. 5:823-826.
-
(1986)
EMBO J.
, vol.5
, pp. 823-826
-
-
Chothia, C.1
Lesk, A.M.2
-
15
-
-
0032573080
-
Glutamyl-tRNA amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis
-
Curnow, A., D. Tumbula, J. Pelaschier, B. Min, and D. Söll. 1998. Glutamyl-tRNA amidotransferase in Deinococcus radiodurans may be confined to asparagine biosynthesis. Proc. Natl. Acad. Sci. USA 95:12838-12843.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 12838-12843
-
-
Curnow, A.1
Tumbula, D.2
Pelaschier, J.3
Min, B.4
Söll, D.5
-
16
-
-
0025874160
-
Sequence, structural and evolutionary relationships between class 2 aminoacyl-tRNA synthetases
-
Cusack, S., M. Hartlein, and R. Leberman. 1991. Sequence, structural and evolutionary relationships between class 2 aminoacyl-tRNA synthetases. Nucleic Acids Res. 19:3489-3498.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 3489-3498
-
-
Cusack, S.1
Hartlein, M.2
Leberman, R.3
-
17
-
-
0029099218
-
Eleven down and nine to go
-
Cusack, S. 1995. Eleven down and nine to go. Nat. Struct. Biol. 2:824-831.
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 824-831
-
-
Cusack, S.1
-
18
-
-
0035327183
-
Evaluating protein structure-prediction schemes using energy landscape theory
-
Eastwood, M. P., C. Hardin, Z. Luthey-Schulten, and P. G. Wolynes. 2001. Evaluating protein structure-prediction schemes using energy landscape theory. IBM J. Res. Dev 45:475-497.
-
(2001)
IBM J. Res. Dev.
, vol.45
, pp. 475-497
-
-
Eastwood, M.P.1
Hardin, C.2
Luthey-Schulten, Z.3
Wolynes, P.G.4
-
20
-
-
0025972759
-
Cysteinyl-tRNA synthetase: Determination of the last E. coli aminoacyl-tRNA synthetase primary structure
-
Eriani, G., G. Dirheimer, and J. Gangloff. 1991. Cysteinyl-tRNA synthetase: determination of the last E. coli aminoacyl-tRNA synthetase primary structure. Nucleic Acids Res. 19:265-269.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 265-269
-
-
Eriani, G.1
Dirheimer, G.2
Gangloff, J.3
-
21
-
-
0025158208
-
Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs
-
Eriani, G., M. Delarue, O. Poch, J. Gangloff, and D. Moras. 1990. Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs. Nature 347:203-206.
-
(1990)
Nature
, vol.347
, pp. 203-206
-
-
Eriani, G.1
Delarue, M.2
Poch, O.3
Gangloff, J.4
Moras, D.5
-
22
-
-
0018974560
-
The phylogeny of prokaryotes
-
Fox, G. E., E. Stackebrandt, R. B. Hespell, J. Gibson, J. Maniloff, T. A. Dyer, R. S. Wolfe, W. E. Balch, R. S. Tanner, L. J. Magrum, L. B. Zablen, R. Blakemore, R. Gupta, L. Bonen, B. J. Lewis, D. A. Stahl, K. R. Luehrsen, K. N. Chen, and C. R. Woese. 1980. The phylogeny of prokaryotes. Science 209:475-497.
-
(1980)
Science
, vol.209
, pp. 475-497
-
-
Fox, G.E.1
Stackebrandt, E.2
Hespell, R.B.3
Gibson, J.4
Maniloff, J.5
Dyer, T.A.6
Wolfe, R.S.7
Balch, W.E.8
Tanner, R.S.9
Magrum, L.J.10
Zablen, L.B.11
Blakemore, R.12
Gupta, R.13
Bonen, L.14
Lewis, B.J.15
Stahl, D.A.16
Luehrsen, K.R.17
Chen, K.N.18
Woese, C.R.19
-
23
-
-
0036849261
-
Aminoacyl-tRNA synthetases: Versatile players in the changing theater of translation
-
Franckyln, C., J. J. Perona, J. Puetz, and Y.-M. Hou. 2002. Aminoacyl-tRNA synthetases: versatile players in the changing theater of translation. RNA 8:1363-1372.
-
(2002)
RNA
, vol.8
, pp. 1363-1372
-
-
Franckyln, C.1
Perona, J.J.2
Puetz, J.3
Hou, Y.-M.4
-
24
-
-
0036225678
-
The genome of M, acetivorans reveals extensive metabolic and physiological diversity
-
Galagan, J. E., C. Nusbaum, A. Roy, M. G. Endrizzi, P. Macdonald, W. FitzHugh, S. Calvo, R. Engels, S. Smirnov, D. Atnoor, A. Brown, N. Allen, J. Naylor, N. Stange-Thomann, K. DeArellano, R. Johnson, L. Linton, P. McEwan, K. McKernan, J. Talamas, A. Tirrell, W. Ye, A. Zimmer, R. D. Barber, I. Cann, D. E. Graham, D. A. Grahame, A. M. Guss, R. Hedderich, C. Ingram-Smith, H. C. Kuettner, J. A. Krzycki, J. A. Leigh, W. Li, J. Liu, B. Mukhopadhyay, J. N. Reeve, K. Smith, T. A. Springer, L. A. Umayam, O. White, R. H. White, E. C. de Macario, J. G. Ferry, K. F. Jarrell, H. Jing, A. J. Macario, I. Paulsen, M. Pritchett, K. R. Sowers, R. V. Swanson, S. H. Zinder, E. Lander, W. W. Metcalf, and B. Birren. 2002. The genome of M, acetivorans reveals extensive metabolic and physiological diversity. Genome Res. 12:532-542.
-
(2002)
Genome Res.
, vol.12
, pp. 532-542
-
-
Galagan, J.E.1
Nusbaum, C.2
Roy, A.3
Endrizzi, M.G.4
Macdonald, P.5
FitzHugh, W.6
Calvo, S.7
Engels, R.8
Smirnov, S.9
Atnoor, D.10
Brown, A.11
Allen, N.12
Naylor, J.13
Stange-Thomann, N.14
DeArellano, K.15
Johnson, R.16
Linton, L.17
McEwan, P.18
McKernan, K.19
Talamas, J.20
Tirrell, A.21
Ye, W.22
Zimmer, A.23
Barber, R.D.24
Cann, I.25
Graham, D.E.26
Grahame, D.A.27
Guss, A.M.28
Hedderich, R.29
Ingram-Smith, C.30
Kuettner, H.C.31
Krzycki, J.A.32
Leigh, J.A.33
Li, W.34
Liu, J.35
Mukhopadhyay, B.36
Reeve, J.N.37
Smith, K.38
Springer, T.A.39
Umayam, L.A.40
White, O.41
White, R.H.42
De Macario, E.C.43
Ferry, J.G.44
Jarrell, K.F.45
Jing, H.46
Macario, A.J.47
Paulsen, I.48
Pritchett, M.49
Sowers, K.R.50
Swanson, R.V.51
Zinder, S.H.52
Lander, E.53
Metcalf, W.W.54
Birren, B.55
more..
-
25
-
-
0003788049
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Gesteland, R. F., T. R. Cech, and J. F. Atkins. 1999. The RNA world: the nature of modern RNA suggests a prebiotic RNA. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1999)
The RNA World: The Nature of Modern RNA Suggests a Prebiotic RNA
-
-
Gesteland, R.F.1
Cech, T.R.2
Atkins, J.F.3
-
26
-
-
0026531240
-
A relationship between asparagine synthetase A and aspartyl tRNA synthetase
-
Hinchman, S. K., S. Henikoff, and S. M. Schuster. 1992. A relationship between asparagine synthetase A and aspartyl tRNA synthetase. J. Biol. Chem. 5:144-149.
-
(1992)
J. Biol. Chem.
, vol.5
, pp. 144-149
-
-
Hinchman, S.K.1
Henikoff, S.2
Schuster, S.M.3
-
27
-
-
0022467280
-
Escherichia coli tyrosyl- and methionyl-tRNA synthetases display sequence similarity at the binding site for the 3′-end of tRNA
-
Hountondji, C., F. Lederer, P. Dessen, and S. Blanquet. 1986. Escherichia coli tyrosyl- and methionyl-tRNA synthetases display sequence similarity at the binding site for the 3′-end of tRNA. Biochemistry 25:16-21.
-
(1986)
Biochemistry
, vol.25
, pp. 16-21
-
-
Hountondji, C.1
Lederer, F.2
Dessen, P.3
Blanquet, S.4
-
28
-
-
0000652188
-
Unitary triangularization of a nonsymmetric matrix
-
Householder, A. S. 1958. Unitary triangularization of a nonsymmetric matrix. J. Assoc. Comput. Mach. 5:339-342.
-
(1958)
J. Assoc. Comput. Mach.
, vol.5
, pp. 339-342
-
-
Householder, A.S.1
-
30
-
-
0031081750
-
Aminoacyl-tRNA synthesis: Divergent routes to a common goal
-
Ibba, M., A. Curnow, and D. Söll. 1997. Aminoacyl-tRNA synthesis: divergent routes to a common goal. Trends Biochem. Sci. 22:39-42.
-
(1997)
Trends Biochem. Sci.
, vol.22
, pp. 39-42
-
-
Ibba, M.1
Curnow, A.2
Söll, D.3
-
31
-
-
0028244324
-
Substrate specificity is determined by amino acid binding pocket size in Escherichia coli phenylalanyl-tRNA synthetase
-
Ibba, M., P. Kast, and H. Hennecke. 1994. Substrate specificity is determined by amino acid binding pocket size in Escherichia coli phenylalanyl-tRNA synthetase. Biochemistry 33:7107-7112.
-
(1994)
Biochemistry
, vol.33
, pp. 7107-7112
-
-
Ibba, M.1
Kast, P.2
Hennecke, H.3
-
32
-
-
0030707877
-
A euryarchaeal lysyl-tRNA synthetase: Resemblance to class I synthetases
-
Ibba, M., S. Morgan, A. W. Curnow, D. R. Pridmore, U. C. Vothknecht, W. Gardner, W. Lin, C. R. Woese, and D. Söll. 1997. A euryarchaeal lysyl-tRNA synthetase: resemblance to class I synthetases. Science 278:1119-1122.
-
(1997)
Science
, vol.278
, pp. 1119-1122
-
-
Ibba, M.1
Morgan, S.2
Curnow, A.W.3
Pridmore, D.R.4
Vothknecht, U.C.5
Gardner, W.6
Lin, W.7
Woese, C.R.8
Söll, D.9
-
33
-
-
0033782994
-
Aminoacyl-tRNA synthesis
-
Ibba, M., and D. Söll. 2000. Aminoacyl-tRNA synthesis. Annu. Rev. Biochem. 69:617-50.
-
(2000)
Annu. Rev. Biochem.
, vol.69
, pp. 617-650
-
-
Ibba, M.1
Söll, D.2
-
34
-
-
0024358140
-
Evolutionary relationship of Archaebacteria, Eubacteria, and erukaryotes inferred from phylogenetic trees of duplicated genes
-
Iwabe, N., K. Kuma, M. Hasegawa, S. Osawa, and T. Miyata. 1989. Evolutionary relationship of Archaebacteria, Eubacteria, and erukaryotes inferred from phylogenetic trees of duplicated genes. Proc. Natl. Acad. Sci. USA 86:9355-9359.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 9355-9359
-
-
Iwabe, N.1
Kuma, K.2
Hasegawa, M.3
Osawa, S.4
Miyata, T.5
-
35
-
-
0037029031
-
Cysteinyl-tRNA formation and prolyl-tRNA synthetase
-
Jacquin-Becker, C., I. Ahel, A. Ambrogelly, B. Ruan, D. Söll, and C. Stathopoulos. 2002. Cysteinyl-tRNA formation and prolyl-tRNA synthetase. FEBS Lett. 514:34-36.
-
(2002)
FEBS Lett.
, vol.514
, pp. 34-36
-
-
Jacquin-Becker, C.1
Ahel, I.2
Ambrogelly, A.3
Ruan, B.4
Söll, D.5
Stathopoulos, C.6
-
37
-
-
0037512360
-
Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion
-
Kobayashi, T., O. Nureki, R. Ishitani, A. Yaremchuk, M. Tukalo, S. Cusack, K. Sakamoto, and S. Yokoyama. 2003. Structural basis for orthogonal tRNA specificities of tyrosyl-tRNA synthetases for genetic code expansion. Nat. Struct. Biol. 10:425-432.
-
(2003)
Nat. Struct. Biol.
, vol.10
, pp. 425-432
-
-
Kobayashi, T.1
Nureki, O.2
Ishitani, R.3
Yaremchuk, A.4
Tukalo, M.5
Cusack, S.6
Sakamoto, K.7
Yokoyama, S.8
-
38
-
-
0033987612
-
Ribozyme-catalyzed tRNA aminoacylation
-
Lee, N., Y. Bessho, K. Wei, J. Szostak, and H. Suga. 2000. Ribozyme-catalyzed tRNA aminoacylation. Nat. Struct. Biol. 7:28-33.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 28-33
-
-
Lee, N.1
Bessho, Y.2
Wei, K.3
Szostak, J.4
Suga, H.5
-
39
-
-
0029894345
-
Knowing when not to stop: Selenocysteine incorporation in eukaryotes
-
Low, S. C., and M. J. Berry. 1996. Knowing when not to stop: selenocysteine incorporation in eukaryotes. Trends Biochem. Sci. 21:203-208.
-
(1996)
Trends Biochem. Sci.
, vol.21
, pp. 203-208
-
-
Low, S.C.1
Berry, M.J.2
-
40
-
-
0037022651
-
Transfer RNA-dependent amino acid biosynthesis: An essential route to asparagine formation
-
Min, B., J. T. Pelaschier, D. E. Graham, D. Tumbula-Hansen, and D. Söll. 2002. Transfer RNA-dependent amino acid biosynthesis: An essential route to asparagine formation. Proc. Natl. Acad. Sci. USA 99:2678-2683.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 2678-2683
-
-
Min, B.1
Pelaschier, J.T.2
Graham, D.E.3
Tumbula-Hansen, D.4
Söll, D.5
-
41
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
Murzin, A. G., S. E. Brenner, T. Hubbard, and C. Chothia. 1995. SCOP: a structural classification of proteins database for the investigation of sequences and structures. J. Mol. Biol. 247:536-540.
-
(1995)
J. Mol. Biol.
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
42
-
-
0025858457
-
Evolution and relatedness in two aminoacyl-tRNA synthetase families
-
Nagel, G. M., and R. F. Doolittle. 1991. Evolution and relatedness in two aminoacyl-tRNA synthetase families. Proc. Natl. Acad. Sci. USA 88:8121-8125.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 8121-8125
-
-
Nagel, G.M.1
Doolittle, R.F.2
-
43
-
-
0031984643
-
Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase
-
Nakatsu, T., H. Kato, and J. Oda. 1998. Crystal structure of asparagine synthetase reveals a close evolutionary relationship to class II aminoacyl-tRNA synthetase. Nat. Struct. Biol. 5:15-19.
-
(1998)
Nat. Struct. Biol.
, vol.5
, pp. 15-19
-
-
Nakatsu, T.1
Kato, H.2
Oda, J.3
-
44
-
-
0346657228
-
-
Reference deleted
-
Reference deleted.
-
-
-
-
45
-
-
0029771002
-
-
International Conference on Acoustics, Speech, and Signal Processing, Atlanta, Ga
-
Olkin, J. A., L. P. Heck, and K. Naghshineh. 1996. Automated placement of transducers for active noise control: performance measures. International Conference on Acoustics, Speech, and Signal Processing, Atlanta, Ga.
-
(1996)
Automated Placement of Transducers for Active Noise Control: Performance Measures
-
-
Olkin, J.A.1
Heck, L.P.2
Naghshineh, K.3
-
46
-
-
0028125575
-
Initiator transfer RNAs
-
RajBhandary, U. L. 1994. Initiator transfer RNAs. J. Bacteriol. 176:547-552.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 547-552
-
-
RajBhandary, U.L.1
-
47
-
-
0034835280
-
Structure-based phylogeny of class IIa tRNA synthetases in relation to an unusual biochemistry
-
Ribas de Pouplana, L., J. R. Brown, and P. Schimmel. 2001. Structure-based phylogeny of class IIa tRNA synthetases in relation to an unusual biochemistry. J. Mol. Evol. 53:261-268.
-
(2001)
J. Mol. Evol.
, vol.53
, pp. 261-268
-
-
Ribas De Pouplana, L.1
Brown, J.R.2
Schimmel, P.3
-
48
-
-
0030053586
-
Evidence that two present-day components needed for the genetic code appeared after nucleated cells separated from eubacteria
-
Ribas de Pouplana, L., M. Frugier, C. L. Quinn, and P. Schimmel. 1996. Evidence that two present-day components needed for the genetic code appeared after nucleated cells separated from eubacteria. Proc. Natl. Acad. Sci. USA 93:166-170.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 166-170
-
-
Ribas De Pouplana, L.1
Frugier, M.2
Quinn, C.L.3
Schimmel, P.4
-
49
-
-
0035951403
-
Two classes of tRNA synthetase suggested by sterically compatible dockings on tRNA acceptor stem
-
Ribas de Pouplana, L., and P. Schimmel. 2001. Two classes of tRNA synthetase suggested by sterically compatible dockings on tRNA acceptor stem. Cell 104:191-193.
-
(2001)
Cell
, vol.104
, pp. 191-193
-
-
Ribas De Pouplana, L.1
Schimmel, P.2
-
50
-
-
0026743174
-
Multiple protein sequence alignment from tertiary structure comparison: Assignment of global and residue confidence levels
-
Russell, R. B., and G. J. Barton. 1992. Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels. Proteins Structure Function Genet. 14:309-323.
-
(1992)
Proteins Structure Function Genet.
, vol.14
, pp. 309-323
-
-
Russell, R.B.1
Barton, G.J.2
-
51
-
-
0343618479
-
Footprints of aminoacyl-tRNA synthetases are everywhere
-
Schimmel, P., and L. Ribas de Pouplana. 2000. Footprints of aminoacyl-tRNA synthetases are everywhere. Trends Biochem. Sci. 25:207-209.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 207-209
-
-
Schimmel, P.1
Ribas De Pouplana, L.2
-
52
-
-
0000825481
-
A statistical method for evaluating systematic relationships
-
Sokal, R. R., and C. D. Michener. 1958. A statistical method for evaluating systematic relationships. Univ. Kansas Sci. Bull. 28:1409-1438.
-
(1958)
Univ. Kansas Sci. Bull.
, vol.28
, pp. 1409-1438
-
-
Sokal, R.R.1
Michener, C.D.2
-
53
-
-
0037166006
-
Pyrrolysine encoded by UAG in Archaea: Charging of a UAG-decoding specialized tRNA
-
Srinivasan, G., C. James, and J. Krzycki. 2002. Pyrrolysine encoded by UAG in Archaea: charging of a UAG-decoding specialized tRNA. Science 296:1459-1462.
-
(2002)
Science
, vol.296
, pp. 1459-1462
-
-
Srinivasan, G.1
James, C.2
Krzycki, J.3
-
54
-
-
0034695470
-
One polypeptide with two aminoacyl-tRNA synthetase activities
-
Stathopoulos, C., T. Li, R. Longman, U. Vothknecht, H. Becker, M. Ibba, and D. Söll. 2000. One polypeptide with two aminoacyl-tRNA synthetase activities. Science 287:479-482.
-
(2000)
Science
, vol.287
, pp. 479-482
-
-
Stathopoulos, C.1
Li, T.2
Longman, R.3
Vothknecht, U.4
Becker, H.5
Ibba, M.6
Söll, D.7
-
55
-
-
0344994571
-
Archaeal aminoacyl-tRNA synthesis: Diversity replaces dogma
-
Tumbula, D., U. Vothknecht, H. Kim, M. Ibba, B. Min, T. Li, J. Pelaschier, C. Stathopoulos, H. Becker, and D. Söll. 1999. Archaeal aminoacyl-tRNA synthesis: diversity replaces dogma. Genetics 152:1269-1276.
-
(1999)
Genetics
, vol.152
, pp. 1269-1276
-
-
Tumbula, D.1
Vothknecht, U.2
Kim, H.3
Ibba, M.4
Min, B.5
Li, T.6
Pelaschier, J.7
Stathopoulos, C.8
Becker, H.9
Söll, D.10
-
56
-
-
0033152855
-
The genomic tag hypothesis: Modern viruses as molecular fossils and ancient strategies for genomic replication, and clues regarding the origin of protein synthetsis
-
Weiner, A. M., and N. Maizels. 1999. The genomic tag hypothesis: modern viruses as molecular fossils and ancient strategies for genomic replication, and clues regarding the origin of protein synthetsis. Biol. Bull. 196:327-330.
-
(1999)
Biol. Bull.
, vol.196
, pp. 327-330
-
-
Weiner, A.M.1
Maizels, N.2
-
57
-
-
0014633039
-
Gamma-glutamyl phosphate attached to glutamine-specific tRNA. A precursor of glutaminyl-tRNA in Bacillus subtilis
-
Wilcox, M. 1969. Gamma-glutamyl phosphate attached to glutamine-specific tRNA. A precursor of glutaminyl-tRNA in Bacillus subtilis. Eur. J. Biochem. 11:405-412.
-
(1969)
Eur. J. Biochem.
, vol.11
, pp. 405-412
-
-
Wilcox, M.1
-
58
-
-
0034053846
-
Aminoacyl-tRNA synethetases, the genetic code, and the evolutionary process
-
Woese, C. R., G. Olsen, M. Ibba, and D. Söll. 2000. Aminoacyl-tRNA synethetases, the genetic code, and the evolutionary process. Microbiol. Mol. Biol. Rev. 64:202-236.
-
(2000)
Microbiol. Mol. Biol. Rev.
, vol.64
, pp. 202-236
-
-
Woese, C.R.1
Olsen, G.2
Ibba, M.3
Söll, D.4
-
59
-
-
0023184331
-
Bacterial evolution
-
Woese, C. R. 1987. Bacterial evolution. Microbiol. Rev. 51:221-271.
-
(1987)
Microbiol. Rev.
, vol.51
, pp. 221-271
-
-
Woese, C.R.1
-
61
-
-
0034682457
-
Interpreting the universal phylogenetic tree
-
Woese, C. R. 2000. Interpreting the universal phylogenetic tree. Proc. Natl. Acad. Sci. USA 97:8392-8396.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 8392-8396
-
-
Woese, C.R.1
-
62
-
-
0037173066
-
On the evolution of cells
-
Woese, C. R. 2002. On the evolution of cells. Proc. Natl. Acad. Sci. USA 99:8742-8747.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 8742-8747
-
-
Woese, C.R.1
-
63
-
-
0032830481
-
Evolution of aminoacyl-tRNA synthetases-analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events
-
Wolf, Y., L. Aravind, N. Grishin, and E. Koonin. 1999. Evolution of aminoacyl-tRNA synthetases-analysis of unique domain architectures and phylogenetic trees reveals a complex history of horizontal gene transfer events. Genome Res. 9:689-710.
-
(1999)
Genome Res.
, vol.9
, pp. 689-710
-
-
Wolf, Y.1
Aravind, L.2
Grishin, N.3
Koonin, E.4
|