Mitochondrial DNA evidence for admixed origins of Central Siberian populations

American Journal of Physical Anthropology

Volumn 120, Issue 3, 2003, Pages 211-224

  Pakendorf, Brigitte ^a,b   Wiebe, Victor ^b   Tarskaia, Larissa A ^c   Spitsyn, Victor A ^d   Soodyall, Himla ^e   Rodewald, Alexander ^a   Stoneking, Mark ^b  

^a UNIVERSITY OF HAMBURG   (Germany)

^b MAX PLANCK INSTITUTE FOR EVOLUTIONARY ANTHROPOLOGY   (Germany)

^c Russian Federal Service for Surveillance of Consumer Rights Protection and Human Wellbeing   (Russian Federation)

^d RESEARCH CENTRE FOR MEDICAL GENETICS   (Russian Federation)

^e UNIVERSITY OF THE WITWATERSRAND   (South Africa)

Author keywords

Admixture; Language shift; Molecular anthropology

Indexed keywords

MITOCHONDRIAL DNA;

ANTHROPOLOGY; ARTICLE; DNA DETERMINATION; ETHNIC GROUP; GENETIC ANALYSIS; HAPLOTYPE; HUMAN; LANGUAGE; MAJOR CLINICAL STUDY; POLYMERASE CHAIN REACTION; POPULATION GENETICS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RUSSIAN FEDERATION;

BASE SEQUENCE; DNA, MITOCHONDRIAL; FEMALE; GENETICS, POPULATION; HAPLOTYPES; HUMANS; LANGUAGE; MALE; SIBERIA;

EID: 0345073680     PISSN: 00029483     EISSN: None     Source Type: Journal    
DOI: 10.1002/ajpa.10145     Document Type: Article

References (60)

1. Alekseev AN. 1996a. Ancient Yakutia: the Iron Age and the medieval epoch [in Russian]. Novosibirsk: Izdatel'stvo Instituta Arkheologii i Etnografii SO RAN.
2. Alekseev AN. 1996b. The first Russian settlements in the 17th and 18th centuries in northeast Yakutia [in Russian]. Novosibirsk: Izdatel'stvo Instituta Arkheologii i Etnografii SO RAN.
3. Anderson S, Bankier AT, Barrell BG, de Bruijn MHL, Coulson AR, Drouin J, Eperon IC, Nierlich DP, Roe BA, Sanger F, Schreier PH, Smith AJH, Staden R, Young IG. 1981. Sequence and organization of the human mitochondrial genome. Nature 290:457-465.
4. Balzer MM. 1994. Yakut. In: Friedrich P, Diamond N, editors. Encyclopedia of world cultures, volume VI - Russia and Eurasia/China. New York: G.K. Hall & Co. p 404-407.
5. Bandelt HJ, Forster P, Röhl A. 1999. Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37-48.
6. Bertorelle G, Excoffier L. 1998. Inferring admixture proportions from molecular data. Mol Biol Evol 15:1298-1311.
7. Betty DJ, Chin-Atkins AN, Croft L, Sraml M, Easteal S. 1996. Multiple independent origins of the COII/tRNALys intergenic 9-bp mtDNA deletion in Aboriginal Australians. Am J Hum Genet 58:428-433.
8. Boeva SB. 1988. Anthropogenetic study of the indigenous population of the Yakut ASSR in connection with the ethnogenesis of the Yakuts. Ph.D. thesis [in Russian], Moscow State University, Moscow.
9. Burckhardt F, von Haeseler A, Meyer S. 1999. HvrBase: compilation of mtDNA control region sequences from primates. Nucleic Acids Res 27:138-142.
10. Chakraborty R. 1990. Mitochondrial DNA polymorphism reveals hidden heterogeneity within some Asian populations. Am J Hum Genet 47:87-94.
11. Comas D, Calafell F, Mateu E, Perez-Lezaun A, Bertranpetit J. 1996. Geographic variation in human mitochondrial DNA control region sequence: the population history of Turkey and its relationship to the European populations. Mol Biol Evol 13: 1067-1077.
12. Comas D, Calafell F, Mateu E, Perez-Lezaun A, Bosch E, Martinez-Arias R, Clarimon J, Facchini F, Fiori G, Luiselli D, Pettener D, Bertranpetit J. 1998. Trading genes along the Silk Road: mtDNA sequences and the origin of Central Asian populations. Am J Hum Genet 63:1824-1838.
13. Derenko MV. 1997. Variability of mtDNA in Koryaks, Evens and Yakuts [in Russian]. Moscow: Russian Academy of Sciences.
14. Derenko MV, Shields GF. 1998a. Polymorphism in region V of mitochondrial DNA in indigenous populations of northern Asia [in Russian]. Genetika 34:411-415.
15. Derenko MV, Shields GF. 1998b. Variability of mitochondrial DNA in three groups of indigenous inhabitants of northern Asia [in Russian]. Genetika 34:676-681.
16. Derenko MV, Malyarchuk BA, Dambueva IK, Shaikhaev GO, Dorzhu CM, Nimaev DD, Zakharov IA. 2000. Mitochondrial DNA variation in two south Siberian aboriginal populations: implications for the genetic history of north Asia. Hum Biol 72:945-973.
17. Dupanloup I, Bertorelle G. 2001. Inferring admixture proportions from molecular data: extension to any number of parental populations. Mol Biol Evol 18:672-675.
18. Fefelova VV. 1990. Participation of Indo-European tribes in ethnogeny of the Mongoloid population of Siberia: analysis of the HLA antigen distribution in Mongoloids of Siberia. Am J Hum Genet 47:294-301.
19. Fondahl G. 1994. Evenki northern Tungus. In: Friedrich P, Diamond N, editors. Encyclopedia of world cultures, volume VI - Russia and Eurasia/China. New York: G.K. Hall & Co. p 120-124.
20. Forster P. 1996. Dispersal and differentiation of modern Homo sapiens analyzed with mitochondrial DNA. Ph.D. thesis, University of Hamburg, Hamburg.
21. Forsyth J. 1992. A history of the peoples of Siberia. Russia's north Asian colony 1581-1990. Cambridge: Cambridge University Press.
22. Gogolev AI. 2000. The history of Yakutia [in Russian]. Yakutsk: Izdatel'stvo Jakutskogo Gosudarstvennogo Universiteta.
23. Golden PB. 1998. The Turkic peoples: a historical sketch. In: Johanson L, Csató EA, editors. The Turkic languages. London: Routledge. p 16-29.
24. Hillis DM, Mable BK, Larson A, Davis SK, Zimmer EA. 1996. Nucleic acids IV: sequencing and cloning. In: Hillis DM, Moritz C, Mable BK, editors. Molecular systematics. Sunderland, MA: Sinauer Associates. p 321-381.
25. Janhunen J. 1996. Manchuria. An ethnic history. Helsinki: Finno-Ugrian Society.
26. Kaessmann H, Zöllner S, Gustafsson AC, Wiebe V, Laan M, Lundeberg J, Uhlén M, Pääbo S. 2002. Extensive linkage disequilibrium in small human populations in Eurasia. Am J Hum Genet 70:673-685.
27. Karafet TM, Zegura SL, Posukh O, Osipova L, Bergen A, Long J, Goldman D, Klitz W, Harihara S, de Knijff P, Wiebe V, Griffiths RC, Templeton AR, Hammer MF. 1999. Ancestral Asian source(s) of New World Y-chromosome founder haplotypes. Am J Hum Genet 64:817-831.
28. Kolman CJ, Sambuugiin N, Bermingham E. 1996. Mitochondrial DNA analysis of Mongolian populations and implications for the origin of New World founders. Genetics 142:1321-1334.
29. Konstantinov IV. 1975. The origins of the Yakut people and their culture [in Russian]. Yakutia and her neighbors in antiquity. Publications of the Prilenskaya Archaeological Expedition. Yakutsk: Yakutskiy filial SO AN SSSR. p 106-173.
30. Kuehnast KR, Strouthes D. 1994. Kyrgyz. In: Friedrich P, Diamond N, editors. Encyclopedia of world cultures, volume VI - Russia and Eurasia/China. New York: G.K. Hall & Co. p 228-232.
31. Lee SD, Shin CH, Kim KB, Lee YS, Lee JB. 1997. Sequence variation of mitochondrial DNA control region in Koreans. Forensic Sci Int 87:99-116.
32. Macaulay V, Richards M, Hickey E, Vega E, Cruciani F, Guida V, Scozzari R, Bonne-Tamir B, Sykes B, Torroni A. 1999. The emerging tree of west Eurasian mtDNAs: a synthesis of control-region sequences and RFLPs. Am J Hum Genet 64:232-249.
33. Meyer S, Weiss G, von Haeseler A. 1999. Pattern of nucleotide substitution and rate heterogeneity in the hypervariable regions I and II of human mtDNA. Genetics 152:1103-1110.
34. Nasidze I, Stoneking M. 2001. Mitochondrial DNA variation and language replacements in the Caucasus. Proc R Soc Lond [Biol] 268:1197-1206.
35. Novoradovsky AG, Spitsyn VA, Duggirala R, Crawford MH. 1993. Population genetics and structure of Buryats from the Lake Baikal region of Siberia. Hum Biol 65:689-710.
36. Okladnikov AP. 1955. The history of the Yakut ASSR. Volume 1: Yakutia before its incorporation into the Russian state [in Russian]. Moscow: Izdatel'stvo Akademii Nauk SSSR.
37. Orekhov V, Poltoraus A, Zhivotovsky LA, Spitsyn V, Ivanov P, Yankovsky N. 1999. Mitochondrial DNA sequence diversity in Russians. FEBS Lett 445:197-201.
38. Page RDM. 1996. TREEVIEW: an application to display phylogenetic trees on personal computers. Comput Appl Biosci 12: 357-358.
39. Pakendorf B, Spitsyn VA, Rodewald A. 1999. Genetic structure of a Sakha population from Siberia and ethnic affinities. Hum Biol 71:231-244.
40. Pakendorf B, Morar B, Tarskaia LA, Kayser M, Soodyall H, Rodewald A, Stoneking M. 2002. Y-chromosomal evidence for a strong reduction in male population size of Yakuts. Hum Genet 110:198-200.
41. Piercy R, Sullivan KM, Benson N, Gill P. 1993. The application of mitochondrial DNA typing to the study of white Caucasian genetic identification. Int J Legal Med 106:85-90.
42. Redd AJ, Takezaki N, Sherry ST, McGarvey ST, Sofro AS, Stoneking M. 1995. Evolutionary history of the COII/tRNALys intergenic 9 base pair deletion in human mitochondrial DNAs from the Pacific. Mol Biol Evol 12:604-615.
43. Richards M, Corte-Real H, Forster P, Macaulay V, Wilkinson- Herbots H, Demaine A, Papiha S, Hedges R, Bandelt HJ, Sykes B. 1996. Paleolithic and Neolithic lineages in the European mitochondrial gene pool. Am J Hum Genet 59:185-203.
44. Ruhlen M. 1991. A guide to the world's languages. Volume 1: classification. Stanford: Stanford University Press.
45. Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425.
46. Schneider S, Roessli D, Excoffier L. 2000. Arlequin version 2.000: a software for population genetics data analysis. Geneva: Genetics and Biometry Laboratory, University of Geneva.
47. Schönig C. 1990. Classification problems of Yakut. In: Dor R, editor. L'Asie centrale et ses voisins. Paris: INALCO. p 91-102.
48. Schurr TG, Sukernik RI, Starikovskaya YB, Wallace DC. 1999. Mitochondrial DNA variation in Koryaks and Itel'men: population replacement in the Okhotsk Sea-Bering Sea region during the Neolithic. Am J Phys Anthropol 108:1-39.
49. Shields GF, Schmiechen AM, Frazier BL, Redd A, Voevoda MI, Reed JK, Ward RH. 1993. MtDNA sequences suggest a recent evolutionary divergence for Beringian and northern North American populations. Am J Hum Genet 53:549-562.
50. Spevakovsky AB. 1994. Even. In: Friedrich P, Diamond N, editors. Encyclopedia of world cultures, volume VI - Russia and Eurasia/China. New York: G.K. Hall & Co. p 115-119.
51. Starikovskaya YB, Sukernik RI, Schurr TG, Kogelnik AM, Wallace DC. 1998. MtDNA diversity in Chukchi and Siberian Eskimos: implications for the genetic history of ancient Beringia and the peopling of the New World. Am J Hum Genet 63:1473-1491.
52. Stone AC, Stoneking M. 1998. MtDNA analysis of a prehistoric Oneota population: implications for the peopling of the New World. Am J Hum Genet 62:1153-1170.
53. Tamura K, Nei M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10:512-526.
54. Torroni A, Sukernik RI, Schurr TG, Starikorskaya YB, Cabell MF, Crawford MH, Comuzzie AG, Wallace DC. 1993. MtDNA variation of aboriginal Siberians reveals distinct genetic affinities with Native Americans. Am J Hum Genet 53:591-608.
55. Torroni A, Bandelt HJ, D'Urbano L, Lahermo P, Moral P, Sellitto D, Rengo C, Forster P, Savontaus ML, Bonne-Tamir B, Scozzari R. 1998. MtDNA analysis reveals a major late Paleolithic population expansion from southwestern to northeastern Europe. Am J Hum Genet 62:1137-1152.
56. Vigilant L, Pennington R, Harpending H, Kocher TD, Wilson AC. 1989. Mitochondrial DNA sequences in single hairs from a southern African population. Proc Natl Acad Sci USA 86:9350-9354.
57. Watson E, Bauer K, Aman R, Weiss G, von Haeseler A, Pääbo S. 1996. MtDNA sequence diversity in Africa. Am J Hum Genet 59:437-444.
58. Wrischnik LA, Higuchi RG, Stoneking M, Erlich HA, Arnheim N, Wilson AC. 1987. Length mutations in human mitochondrial DNA: direct sequencing of enzymatically amplified DNA. Nucleic Acids Res 15:529-542.
59. Zerjal T, Dashnyam B, Pandya A, Kayser M, Roewer L, Santos FR, Schiefenhövel W, Fretwell N, Jobling MA, Harihara S, Shimizu K, Semjidmaa D, Sajantila A, Salo P, Crawford MH, Ginter EK, Evgrafov OV, Tyler-Smith C. 1997. Genetic relationships of Asians and northern Europeans, revealed by Y-chromosomal DNA analysis. Am J Hum Genet 60:1174-1183.
60. Zhukovskaya N. 1994. Buriats. In: Friedrich P, Diamond N, editors. Encyclopedia of world cultures, volume VI - Russia and Eurasia/China. New York: G.K. Hall & Co. p 65-68.