Molecular cloning and characterization of human acid sensing ion channel (ASIC)2 gene promoter

Gene

Volumn 313, Issue 1-2, 2003, Pages 91-101

  Xia, Jiazeng ^a   Zhou, Zhen Hong ^a   Bubien, James K ^a   Fuller, Catherine M ^a   Markert, James M ^a,b   Mapstone, Timothy B ^c   Gillespie, G Yancey ^b   Benos, Dale J ^a  

^a UNIVERSITY OF ALABAMA AT BIRMINGHAM   (United States)

^b Kentucky   (United States)

^c EMORY UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

ASIC2 promoter; Glioma; Methylation; Transcription factors

Indexed keywords

5 AZA 2' DEOXYCYTIDINE; ION CHANNEL; TRANSCRIPTION FACTOR; ACCN3 PROTEIN, HUMAN; ASIC CHANNEL; AZACITIDINE; DNA; DNA BINDING PROTEIN; DRUG DERIVATIVE; HYBRID PROTEIN; LUCIFERASE; MEMBRANE PROTEIN; MESSENGER RNA; NERVE PROTEIN; RNA BINDING PROTEIN; SODIUM CHANNEL; TRANSCRIPTION FACTOR SP1;

ARTICLE; BASE PAIRING; CPG ISLAND; DELETION MUTANT; GEL MOBILITY SHIFT ASSAY; GENE EXPRESSION; GENETIC TRANSFECTION; GLIOMA CELL; HUMAN; HUMAN ACID SENSING ION CHANNEL; HUMAN CELL; METHYLATION; MOLECULAR CLONING; MUTATION; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN BINDING; TATA BOX; TRANSCRIPTION INITIATION SITE; TUMOR CELL LINE; BINDING SITE; BRAIN; CELL CULTURE; CELL MEMBRANE POTENTIAL; CHEMISTRY; DNA METHYLATION; DNA SEQUENCE; DRUG EFFECT; GENE EXPRESSION REGULATION; GENETICS; GLIOMA; METABOLISM; MOLECULAR GENETICS; PATCH CLAMP; PATHOLOGY; PATHOPHYSIOLOGY; PHYSIOLOGY;

AZACITIDINE; BASE SEQUENCE; BINDING SITES; BRAIN; CLONING, MOLECULAR; CPG ISLANDS; DNA; DNA METHYLATION; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION, NEOPLASTIC; GLIOMA; HUMANS; LUCIFERASES; MEMBRANE POTENTIALS; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; MUTATION; NERVE TISSUE PROTEINS; PATCH-CLAMP TECHNIQUES; PROMOTER REGIONS (GENETICS); RECOMBINANT FUSION PROTEINS; RNA, MESSENGER; RNA-BINDING PROTEINS; SEQUENCE ANALYSIS, DNA; SODIUM CHANNELS; SP1 TRANSCRIPTION FACTOR; TRANSCRIPTION FACTORS; TRANSCRIPTION INITIATION SITE; TRANSFECTION; TUMOR CELLS, CULTURED;

EID: 0142121399     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(03)00633-4     Document Type: Article

References (35)

1. Askwith C.C., Cheng C., Ikuma M., Benson C., Price M.P., Welsh M.J. Neuropeptide FF and FMRFamide potentiate acid-evoked currents from sensory neurons and proton-gated DEG/ENaC channels. Neuron. 26:2000;133-141.
2. Baek S.J., Horowitz J.M., Eling T.E. Molecular cloning and characterization of human nonsteroidal anti-inflammatory drug-activated gene promoter. Basal transcription is mediated by Sp1 and Sp3. J. Biol. Chem. 276:2001;33384-33392.
3. Bakhshi R., Goel A., Seth P., Chhikara P., Chauhan S.S. Cloning and characterization of human cathepsin L promoter. Gene. 275:2001;93-101.
4. Bechter O.E., Eisterer W., Dlaska M., Kuhr T., Thaler J. CpG island methylation of the hTERT promoter is associated with lower telomerase activity in B-cell lymphocytic leukemia. Exp. Hematol. 30:2002;26-33.
5. + channels: insights and outlooks. News Physiol. Sci. 12:1997;55-61.
6. Bevan S., Geppetti P. Protons: small stimulants of capsaicin-sensitive sensory nerves. Trends Neurosci. 17:1994;509-512.
7. + conductance. Am. J. Physiol. 276:1999;C1405-C1410.
8. Casolaro V., Keane-Myers A., Swendeman S.L., Steindler C., Zhong F., Sheffery M., Georas S.N., Ono S.J. Identification and characterization of a critical CP2-binding element in the human interleukin-4 promoter. J. Biol. Chem. 275:2000;36605-36611.
9. Chen C.C., England S., Akopian A.N., Wood J.N. A sensory neuron-specific, proton-gated ion channel. Proc. Natl. Acad. Sci. USA. 95:1998;10240-10245.
10. Deng G., Chen A., Hong J., Chae H.S., Kim Y.S. Methylation of CpG in a small region of the hMLH1 promoter invariably correlates with the absence of gene expression. Cancer Res. 59:1999;2029-2033.
11. Frohman M.A., Dush M.K., Martin G.R. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer. Proc. Natl. Acad. Sci. USA. 85:1988;8998-9002.
12. Garcia-Añoveros J., Derfler B., Neville-Golden J., Hyman B.T. BNaC1 and BNaC2 constitute a new family of human neuronal sodium channels related to degenerins and epithelial sodium channels. Proc. Natl. Acad. Sci. USA. 94:1997;1459-1464.
13. Gardiner-Garden M., Frommer M. CpG islands in vertebrate genomes. J. Mol. Biol. 196:1987;261-282.
14. Garty H., Palmer L.G. Epithelial sodium channels: function, structure, and regulation. Physiol. Rev. 77:1997;359-396.
15. Grunder S., Geissler H.S., Bassler E.L., Ruppersberg J.P. A new member of acid-sensing ion channels from pituitary gland. NeuroReport. 11:2000;1607-1611.
16. Henikoff S. Unidirectional digestion with exonuclease III in DNA sequence analysis. Methods Enzymol. 155:1987;156-165.
17. Herman J.G., Graff J.R., Myohanen S., Nekin E.N., Baylin S.B. Methylation specific PCR: a novel PCR assay for methylation status of CpG islands. Proc. Natl. Acad. Sci. USA. 93:1996;9821-9826.
18. Kumar A.P., Butler A.P. Transcription factor Sp3 antagonizes the activation of ornithine decarboxylase promoter by Sp1. Nucleic Acids Res. 25:1997;2012-2019.
19. Lingueglia E.D., Weille J.R., Bassilana F., Heurteaux C., Sakai H., Waldmann R., Lazdunski M. A modulatory subunit of acid sensing ion channels in brain and dorsal root ganglion cells. J. Biol. Chem. 272:1997;29778-29783.
20. Lu J., Lee W., Jiang C., Keller E.B. Start site selection by Sp1 in the TATA-less human Ha-ras promoter. J. Biol. Chem. 269:1994;5391-5402.
21. Mantovani R. A survey of 178 NF-Y binding CCAAT boxes. Nucleic Acids Res. 26:1998;1135-1143.
22. Marin M., Karis A., Visser P., Grosveld F., Philipsen S. Transcription factor Sp1 is essential for early embryonic development but dispensable for cell growth and differentiation. Cell. 89:1997;619-628.
23. McCleskey E.W., Gold M.S. Ion channels of nociception. Annu. Rev. Physiol. 61:1999;835-856.
24. Mori M., Mimori K., Inoue H., Barnard G.F., Tsuji T., Nanbara S., Ueo H., Akiyoshi T. Detection of cancer micrometastases in lymph nodes by reverse transcriptase-polymerase chain reaction. Cancer Res. 55:1995;3417-3420.
25. + channel. J. Biol. Chem. 271:1996;7879-7882.
26. Price M.P., Lewin G.R., McIlwrath S.L., et al. The mammalian sodium channel BNaC1 is required for normal touch sensation. Nature. 407:2000;1007-1011.
27. Quandt K., Frech K., Karas H., Wingender E., Werner T. MatInd and MatInSpector-new fast and versatile tools for detection of consensus matches in nucleotide sequence data. Nucleic Acids Res. 23:1995;4878-4884.
28. Rideout W.M. 3rd, Coetzee G.A., Olumi A.F., Jones P.A. 5-methylcytosine as and endogenous mutagen in human LDL receptor and p53 gene. Science. 249:1990;1288-1290.
29. Santi D.V., Norment A., Garrett C.E. Covalent bond formation between a DNA-cytosine methyltransferase and DNA containing 5-azacytosine. Proc. Natl. Acad. Sci. USA. 81:1984;6993-6997.
30. Tobertson K.D., Jones P.A. DNA methylation: past, present and future directions. Carcinogenesis. 21:2000;461-467.
31. Van Noesel M.M., VanBezouw S., Salomons G.S., Voute P.A., Pieters R., Baylin S.B., Herman J.G., Versteeg R. Tumor-specific down-regulation of the tumor necrosis factor-related apoptosis-inducing ligand decoy receptors DcR1 and DcR2 is associated with dense promoter hypermethylation. Cancer Res. 62:2002;2157-2161.
32. Waldmann R., Champigny G., Voilley N., Lauritzen I., Lazdunski M. The mammalian degeneren MDEG, an amiloride-sensitive cation channel activated by mutations causing neurodegeneration in Caenorhabditis elegans. J. Biol. Chem. 271:1996;10433-10436.
33. + channel specific for sensory neurons. J. Biol. Chem. 272:1997;20975-20978.
34. Waldmann R., Champigny G., Lingueglia E., Weille J., Heurteaux C., Lazdunski M. H(+)-gated cation channels. Ann. N.Y. Acad. Sci. 868:1999;67-76.
35. Xiao J.F., Fischer C., Steinlein O.K. Cloning and mutation analysis of the human potassium channel KCNQ2 gene promoter. NeuroReport. 12:2001;3733-3739.