Studies on molecular interactions of protein and their carbohydrate ligands by NMR

Trends in Glycoscience and Glycotechnology

Volumn 15, Issue 84, 2003, Pages 221-233

  Shimizu, Hiroki ^a  

^a TOHOKU UNIVERSITY   (Japan)

Author keywords

3D NOESY HSQC; Dipolar coupling; Liquid crystal NMR; NMR; Protein carbohydrate interaction

Indexed keywords

CARBOHYDRATE; CARBON 13; LIGAND; OLIGOSACCHARIDE; PROTEIN;

ANALYTIC METHOD; BINDING AFFINITY; CARBOHYDRATE ANALYSIS; CHEMICAL BOND; ISOTOPE LABELING; LIQUID CRYSTAL; LIQUID CRYSTALLINE PHASE NUCLEAR MAGNETIC RESONANCE; MEASUREMENT; MOLECULAR INTERACTION; NUCLEAR MAGNETIC RESONANCE; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PROTEIN ANALYSIS; PROTEIN INTERACTION; SENSITIVITY ANALYSIS; SHORT SURVEY; SIGNAL PROCESSING;

EID: 0142039754     PISSN: 09157352     EISSN: None     Source Type: Journal    
DOI: 10.4052/tigg.15.221     Document Type: Short Survey

References (41)

1. Gorter, C. J. (1936) Physica 3, 995
2. Ravi, I. I., Zacharias, J. R., Millman, S., Kusch, P. (1938) Phys. Rev. 53, 318
3. Both Purcell and Block, Nobel Lecture, December 1952.
4. Heterobuclear Single-quantun Correlation, Bodenhausen, G., Reuben, D. J. (1980) Chem. Phys. Lett. C 69, 185
5. Heterobuclear Multiple-quantun Correlation, Originated by Muller, L. (1979) J. Am. Chem. Soc. 101, 4481
6. Correlated Spectroscopy, Dadok, J., Sprecher, R. F. (1974) J. Magn. Reson. 13, 243
7. Correlation Spectroscopy via Long-range Coupling Spectrum
8. Heterobuclear Multiple-Bond Correlation, Bax, A., Summers, M. F. (1986) J. Am. Chem. Soc. 108, 2093; Norwood, T. J., Boyd, J., Heritage, J. E., Campbell, I. D. (1990) J. Magn. Reson. 87, 488
9. Heterobuclear Multiple-Bond Correlation, Bax, A., Summers, M. F. (1986) J. Am. Chem. Soc. 108, 2093; Norwood, T. J., Boyd, J., Heritage, J. E., Campbell, I. D. (1990) J. Magn. Reson. 87, 488
10. Homonuclear Hartmann-Hahn Spectroscopy; Bax, A., Davis, D. G., Sarkar, S. K. (1985) J. Magn. Reson., 63, 230, Alternatively called Total Correlation Spectroscopy, Braunschweiler, L., Ernst, R. R. (1983) J. Magn. Reson. 53, 521
11. Homonuclear Hartmann-Hahn Spectroscopy; Bax, A., Davis, D. G., Sarkar, S. K. (1985) J. Magn. Reson., 63, 230, Alternatively called Total Correlation Spectroscopy, Braunschweiler, L., Ernst, R. R. (1983) J. Magn. Reson. 53, 521
12. Nuclear Overhauser Effect Spectroscopy, Macura, S., Ernst, R. R. (1980) Mol. Phys. 41, 95
13. Rotating Frame Overhauser Effect Spectroscopy, Bothner-By, A. A., Stephens, R. L., Lee, J., Warren, C. D., Jeanloz, R. W. (1984) J. Am. Chem. Soc. 106, 811, Bax, A., Davis, D. G. (1985) J. Magn. Reson. 63, 207
14. Rotating Frame Overhauser Effect Spectroscopy, Bothner-By, A. A., Stephens, R. L., Lee, J., Warren, C. D., Jeanloz, R. W. (1984) J. Am. Chem. Soc. 106, 811, Bax, A., Davis, D. G. (1985) J. Magn. Reson. 63, 207
15. Reviewed by Sattler, M., Schleucher, J., Griesinger, C. (1999) Prog. NMR Spectroscopy 34, 93
16. Clore, G., Gronenborn, A. M.; J. Magn. Reson. 48, 402. ibid 53, 423
17. Clore, G., Gronenborn, A. M.; J. Magn. Reson. 48, 402. ibid 53, 423
18. Shuker, S. B., Hajduk, P. J., Meadows, R. P., Fesik, S. W. (1996) Science 274, 1531, Kessler, H. (1997) Angew. Chem. 109, 875; idem. (1997) Angew. Chem. Int. Ed. Engl. 36, 829
19. Shuker, S. B., Hajduk, P. J., Meadows, R. P., Fesik, S. W. (1996) Science 274, 1531, Kessler, H. (1997) Angew. Chem. 109, 875; idem. (1997) Angew. Chem. Int. Ed. Engl. 36, 829
20. Shuker, S. B., Hajduk, P. J., Meadows, R. P., Fesik, S. W. (1996) Science 274, 1531, Kessler, H. (1997) Angew. Chem. 109, 875; idem. (1997) Angew. Chem. Int. Ed. Engl. 36, 829
21. Otting, G., Senn, H., Wagner, G., Wuthrich, K. (1986) J. Magn. Reson. 70, 500; Otting, G., Wuthrich, K. (1989) ibid 85, 586
22. Otting, G., Senn, H., Wagner, G., Wuthrich, K. (1986) J. Magn. Reson. 70, 500; Otting, G., Wuthrich, K. (1989) ibid 85, 586
23. Zwahlen, C., Legault, P., Vincent, S. J. F., Greenblatt, J., Konrat, R., Kay, L. E. (1997) J. Am. Chem. Soc. 119, 6711
24. Meyer, B., Weimar, T., Peters, T. (1997) Eur. J. Biochem. 246, 705
25. Henrichsen, D., Ernst, B., Magnani, J. L., Wang, W.-T., Meyer, B., Peters, T. (1999) Angew. Chem. Int. Ed. 38, 98
26. Shimizu, H., Field, R. A., Homans, S. W., Donohue-Rolfe, A. (1998) Biochemistry 37, 11078
27. Shimizu, H., Brown, J. M., Homans, S. W., Field, R. A. (1998) Tetrahedron 54, 9489
28. Miura, T., Inazu, T. (2003) Tetrahedron Lett. 44, 1819 and references therein
29. 13]-D-Galactose 490,000 yen/1g by CIL (Cambridge Isotope Laboratories)
30. 13]-D-Glucose 45,000 yen/1g by CIL (Cambridge Isotope Laboratories)
31. Ling, H., Boodhoo, A., Hazes, B., Read, R. J. (1998) Biochemistry 37, 1777
32. St. Hilaire, P. M., Boyd, M. K., Toone, E. J. (1994) Biochemistry 33, 14452; Clark, C., Bast, D., Sharp, A. M., St. Hilaire, P. M., Agha, R., Stein, P. E., Toone, E. J., Read, R. J., Brunton, J. L. (1996) Mol. Microbio. 19, 891
33. St. Hilaire, P. M., Boyd, M. K., Toone, E. J. (1994) Biochemistry 33, 14452; Clark, C., Bast, D., Sharp, A. M., St. Hilaire, P. M., Agha, R., Stein, P. E., Toone, E. J., Read, R. J., Brunton, J. L. (1996) Mol. Microbio. 19, 891
34. Nyholm, P. G., Brunton, J. L., Lingwood, C. A. (1995) Int. J. Biol. Macromol. 17, 199; Nyholm, P. G., Magnusson, G., Zheng, Z. Z., Norel, R., Binningtonboyd, B., Lingwood, C. A. (1996) Chem. Biol. 3, 263
35. Nyholm, P. G., Brunton, J. L., Lingwood, C. A. (1995) Int. J. Biol. Macromol. 17, 199; Nyholm, P. G., Magnusson, G., Zheng, Z. Z., Norel, R., Binningtonboyd, B., Lingwood, C. A. (1996) Chem. Biol. 3, 263
36. Tjandra, N., Bax, A. (1997) Science 278, 1111
37. Shimizu, H., Donohue-Rolfe, A., Homans, S. W. (1999) J. Am. Chem. Soc. 121, 5815
38. Thompson, G. S., Shimizu, H., Homans, S. W., Donohue-Rolfe, A. (2000) Biochemistry 39, 13153
39. Chou, J. J., Gaemers, S., Howder, B., Louis, J. M., Bax, A. (2001) J. Biomol. NMR. 21, 377
40. Trempe, J.-F., Morin, F. G., Xia, Z., Marchessault, R. H., Gehring, K. (2002) J. Biomol. NMR. 22, 83
41. Shimizu, H., Homans, S. W. (2002) XXXIIInd Japanese Carbohydrate Symposium, Yokohama JAPAN, A3-03, August