Structure of diferric hen serum transferrin at 2.8 Å resolution

Acta Crystallographica - Section D Biological Crystallography

Volumn 59, Issue 10, 2003, Pages 1773-1781

  Thakurta, Piyali Guha ^a   Choudhury, Debi ^a   Dasgupta, Rakhi ^a   Dattagupta, J K ^a  

^a SAHA INSTITUTE OF NUCLEAR PHYSICS   (India)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; FERRIC ION; IRON; OVOTRANSFERRIN; TRANSFERRIN;

ANIMAL; ARTICLE; BINDING SITE; CHEMICAL STRUCTURE; CHEMISTRY; CHICKEN; COMPARATIVE STUDY; ELECTRICITY; FEMALE; HYDROGEN BOND; METABOLISM; PROTEIN SECONDARY STRUCTURE; PROTEIN TERTIARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

AMINO ACIDS; ANIMALS; BINDING SITES; CHICKENS; CONALBUMIN; CRYSTALLOGRAPHY, X-RAY; ELECTROSTATICS; FEMALE; FERRIC COMPOUNDS; HYDROGEN BONDING; IRON; MODELS, MOLECULAR; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; TRANSFERRIN;

ANIMALIA; GALLUS GALLUS; ORYCTOLAGUS CUNICULUS;

EID: 0141959910     PISSN: 09074449     EISSN: None     Source Type: Journal    
DOI: 10.1107/S0907444903016652     Document Type: Article

References (57)

1. Aisen, P. (1989). Iron Carriers and Iron Proteins, edited by T. Loeler, pp. 353-371, New York: VCH.
2. Bailey, S., Evans, R. W., Garratt, R. C., Gorinsky, B., Hasnain, S., Horsburgh, C., Jhoti, H., Lindley, P. F., Mydin, A., Sarra, R. & Watson, J. L. (1988). Biochemistry, 27, 5804-5812.
3. Baker, E. N. & Lindley, P. F. (1992). Inorg. Biochem. 47, 147-160.
4. Baker, E. N. (1994). Adv. Org. Chem. 41, 389-463.
5. Bewley, M. C., Tam, B. M., Grewal, J., He, S., Shewry, S., Murphy, M. E. P., Mason, A. B., Woodworth, R. C., Baker, E. N. & MacGillivray, R. T. A. (1999). Biochemistry, 38, 2535-2541.
6. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T. & Warren, G. L. (1998). Acta Cryst. D54, 905-921.
7. Brünger, A. T., Karplus, M. & Petsko, G A. (1989). Acta Cryst. A45, 50-61.
8. Choudhury, D., Guha Thakurta, P., Dasgupta, R., Sen, U., Biswas, S., Chakrabarti, C. & Dattagupta, J. K. (2002). Biochem. Biophys. Res. Commun. 295, 125-128.
9. Collaborative Computational Project, Number 4 (1994). Acta Cryst. D50, 760-763.
10. Dautry-Varsat, A., Cienchanover, A. & Lodish, H. F. (1983). Proc. Natl Acad. Sci. USA, 80, 2258-2262.
11. Dewan, J. C., Mikami, B., Hirose, M. & Sacchettini, J. C. (1993). Biochemistry, 32, 11963-11968.
12. El Hage Chahine, J. M. & Pakdaman, R. (1975). Eur. J. Biochem. 230, 1101-1110.
13. Esnouf, R. M. (1997). J. Mol. Graph. 15, 132-134.
14. Grossmann, G. J., New, M., Pantos, E., Schwab, F. J., Evans, R. W., Townes-Andrews, E., Lindley, P. F., Appel, H., Thies, W. G. & Hasnain, S. S. (1991). J. Mol. Biol. 231, 554-558.
15. Hall, D. R., Hadden, J. M., Leonard, G. A., Bailey, S., Neu, M., Winn, M. & Lindley, P. F. (2002). Acta Cryst. D58, 70-80.
16. Haridas, M., Anderson, B. F. & Baker, E. N. (1995). Acta Cryst. D51, 629-646.
17. Jameson, G. B., Anderson, B. F., Norris, G. E., Thomas, D. H. & Baker, E. N. (1998). Acta Cryst. D54, 1319-1335.
18. Jeffrey, P. D., Bewley, M. C., MacGillvray, R. T. A., Mason, A. B., Woodworth, R. C. & Baker, E. N. (1998). Biochemistry, 37, 13978-13986.
19. Jones, T. A., Zou, J. Y., Cowan, S. W. & Kjeldgaard, M. (1991). Acta Cryst. A47, 110-119.
20. Karthikeyan, S., Paramasivam, M., Yadav, S., Srinivasan, A. & Singh T. P. (1999). Acta Cryst. D55, 1805-1813.
21. Khan, J. A., Kumar, P., Paramasivam, M., Yadav, R. S., Sahani, M. S., Sharma, S., Srinivasan, A. & Singh, T. P. (2001). J. Mol. Biol. 309, 751-761.
22. Kleywegt, G. J. & Jones, T. A. (1998). Acta Cryst. D54, 1119-1131.
23. Kraulis, P. J. (1991). J. Appl. Cryst. 24, 946-950.
24. Kurokawa, H., Dewan, J. C., Mikami, B., Sacchettini, J. C. & Hirose, M. (1999). J. Biol. Chem. 274, 28445-28452.
25. Kurokawa, H., Mikami, B. & Hirose, M. (1995). J. Mol. Biol. 254, 196-207.
26. Kuser, P., Hall, D. R., Haw, M. L., Neu, M., Evans, R. W. & Lindley, P. F. (2002). Acta Cryst. D58, 777-783.
27. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
28. Lin, L. N., Mason, A. B., Woodworth, R. C. & Brandts, J. F. (1991). Biochemistry, 30, 11660-11669.
29. Lindley, P. F., Bajaj, M., Evans, R. W., Garratt, R. C., Hasnain, S. S., Jhoti, H., Kuser, P., Neu, M., Patel, K., Sarra, R., Strange, P. & Walton, A. (1993). Acta Cryst. D49, 292-304.
30. MacGillivray, R. T. A., Bewley, M. C., Smith, C. A., He, Q. Y., Mason, A. B., Woodworth, R. C. & Baker, E. N. (2000). Biochemistry, 39, 1211-1216.
31. MacGillivray, R. T. A., Moore, S. A., Chen, J., Anderson, B. F., Baker, H., Luo, Y., Bewley, M., Smith, C. A., Murphy, M. E. P., Wang, Y., Mason, A. B., Woodworth, R. C., Brayer, J. D. & Baker, E. N. (1998). Biochemistry, 37, 7919-7928.
32. Mason, A. B., Brown, S. A. & Church, W. R. (1987). J. Biol. Chem. 262, 9011-9015.
33. Mason, A. B., Tam, B. M., Woodworth, R. C., Oliver, R. W. A., Green, B. N., Lin, L.-N., Brandts, J. F., Savage, K. J., Lineback, J. A. & MacGillivray, R. T. A. (1997). Biochem. J. 326, 77-85.
34. Mason, A. B. & Woodworth, R. C. (1984). J. Biol. Chem. 259, 1866-1873.
35. Mason, A. B., Woodworth, R. C., Oliver, R. W. A., Green, B. N., Lin, L.-N., Brandts, J. F., Savage, K. J., Tam, B. M. & MacGillivray, R. T. A. (1996). Biochem. J. 319, 361-368.
36. Mer, G., Hietter, H. & Lefévre, J.-F. (1996). Nature Struct. Biol. 3, 45-53.
37. Mizutani, K., Mikami, B. & Hirose, M. (2001). J. Mol. Biol. 309, 937-947.
38. Mizutani, K., Muralidhara, B. K., Yamashita, H., Tabeta, S., Mikami, B. & Hirose, M. (2001). J. Biol. Chem. 276, 35940-35946.
39. Mizutani, K., Yamashita, H., Kurokawa, H., Mikami, B. & Hirose, M. (1999). J. Biol. Chem. 274, 10190-10194.
40. Mizutani, K., Yamashita, H., Mikami, B. & Hirose, M. (2000). Biochemistry, 39, 3258-3265.
41. Montreuil, J., Tonnelat, J. & Mullet, S. (1960). Biochim. Biophys. Acta, 45, 413-421.
42. Moore, S. A., Anderson, B. F., Groom, C. R., Haridas, M. & Baker, E. N. (1997). J. Mol. Biol. 274, 222-236.
43. Navaza, J. (1994). Acta Cryst. A50, 157-163.
44. Nurizzo, B., Baker, H. M., He, Q.-Y., MacGillivray, R. T. A., Mason, A. B., Woodworth, R. C. & Baker, E. N. (2001). Biochemistry, 40, 1616-1623.
45. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
46. Rawas, A., Moreton, K., Muirhead, H. & Williams, J. (1989). J. Mol. Biol. 208, 213-214.
47. Rawas, A., Muirhead, H. & Williams, J. (1996). Acta Cryst. D52, 631-640.
48. Rudd, P. M., Joao, H. C., Coghill, E., Fiten, P., Saunders, M. R., Opdenakker, G. & Dwek, R. A. (1994). Biochemistry, 33, 17-22.
49. Sharma, A. K., Paramasivam, M., Srinivasan, A., Yadav, M. P. & Singh, T. P. (1999). J. Mol. Biol. 289, 303-317.
50. Sharma, A. K., Rajashankar, K. R., Yadav, M. P. & Singh, T. P. (1999). Acta Cryst. D55, 1152-1157.
51. Shimo-oka, T., Hagiwara, Y. & Ozawa, E. (1986). J. Cell. Physiol. 126, 341-351.
52. Thibodeau, S. N., Lee, D. C. & Palmiter, R. D. (1978). J. Biol. Chem. 253, 3771-3774.
53. Wang, C., Eufemi, M., Turano, C. & Giartosio, A. (1996). Biochemistry, 35, 7299-7307.
54. Williams, J. (1968). Biochem. J. 108, 57-67.
55. Williams, J. & Moreton, K. (1988). Biochem. J. 251, 849-855.
56. Woodworth, R. C., Mason, A. B., Funk, W. D. & MacGillivray, R. T. A. (1991). Biochemistry, 30, 10825-10829.
57. Young, S. P., Bomford, A. & Williams, R. (1984). Biochem. J. 219, 505-510.