-
1
-
-
0033567131
-
The yeast exosome and human PM-Scl are related complexes of 3′→5′ exonucleases
-
Allmang C., Petfalski E., Podtelejnikov A., Mann M., Tollervey D., Mitchell P. The yeast exosome and human PM-Scl are related complexes of 3′→5′ exonucleases. Genes Dev. 13:1999;2148-2158.
-
(1999)
Genes Dev.
, vol.13
, pp. 2148-2158
-
-
Allmang, C.1
Petfalski, E.2
Podtelejnikov, A.3
Mann, M.4
Tollervey, D.5
Mitchell, P.6
-
2
-
-
0000577868
-
The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex
-
Anderson J.S., Parker R. The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex. EMBO J. 17:1998;1497-1506.
-
(1998)
EMBO J.
, vol.17
, pp. 1497-1506
-
-
Anderson, J.S.1
Parker, R.2
-
3
-
-
0034161452
-
Sap: A putative dna binding domain involved in chromosomal organization
-
Aravind L., Koonin E.V. Sap. a putative dna binding domain involved in chromosomal organization Trends Biochem. Sci. 25:2000;112-114.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 112-114
-
-
Aravind, L.1
Koonin, E.V.2
-
4
-
-
0035031386
-
The stem-loop binding protein forms a highly stable and specific complex with the 3′ stem-loop of histone mRNAs
-
Battle D.J., Doudna J.A. The stem-loop binding protein forms a highly stable and specific complex with the 3′ stem-loop of histone mRNAs. RNA. 7:2001;123-132.
-
(2001)
RNA
, vol.7
, pp. 123-132
-
-
Battle, D.J.1
Doudna, J.A.2
-
5
-
-
0037086701
-
CCR4, a 3′-5′ poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase
-
Chen J., Chiang Y.C., Denis C.L. CCR4, a 3′-5′ poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase. EMBO J. 21:2002;1414-1426.
-
(2002)
EMBO J.
, vol.21
, pp. 1414-1426
-
-
Chen, J.1
Chiang, Y.C.2
Denis, C.L.3
-
7
-
-
0035193362
-
Exoribonucleases and their multiple roles in RNA metabolism
-
Deutscher M.P., Li Z. Exoribonucleases and their multiple roles in RNA metabolism. Prog. Nucleic Acid Res. Mol. Biol. 66:2001;67-105.
-
(2001)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.66
, pp. 67-105
-
-
Deutscher, M.P.1
Li, Z.2
-
8
-
-
0032826096
-
Formation of the 3′ end of histone mRNA
-
Dominski Z., Marzluff W.F. Formation of the 3′ end of histone mRNA. Gene. 239:1999;1-14.
-
(1999)
Gene
, vol.239
, pp. 1-14
-
-
Dominski, Z.1
Marzluff, W.F.2
-
9
-
-
0035223871
-
Three-hybrid screens for RNA-binding proteins: Proteins binding the 3′ end of histone mRNA
-
Dominski Z., Marzluff W.F. Three-hybrid screens for RNA-binding proteins. Proteins binding the 3′ end of histone mRNA Methods Mol. Biol. 177:2001;291-318.
-
(2001)
Methods Mol. Biol.
, vol.177
, pp. 291-318
-
-
Dominski, Z.1
Marzluff, W.F.2
-
10
-
-
0032910959
-
The stem-loop binding protein facilitates 3′ end formation by stabilizing U7 snRNP binding to the histone pre-mRNA
-
Dominski Z., Zheng L.-X., Sanchez R., Marzluff W.F. The stem-loop binding protein facilitates 3′ end formation by stabilizing U7 snRNP binding to the histone pre-mRNA. Mol. Cell. Biol. 19:1999;3561-3570.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 3561-3570
-
-
Dominski, Z.1
Zheng, L.-X.2
Sanchez, R.3
Marzluff, W.F.4
-
11
-
-
0036142684
-
A novel zinc finger protein is associated with U7 snRNP and interacts with the stem-loop binding protein in the histone pre-mRNP to stimulate 3′-end processing
-
Dominski Z., Erkmann J.A., Yang X., Sanchez R., Marzluff W.F. A novel zinc finger protein is associated with U7 snRNP and interacts with the stem-loop binding protein in the histone pre-mRNP to stimulate 3′-end processing. Genes Dev. 16:2002;58-71.
-
(2002)
Genes Dev.
, vol.16
, pp. 58-71
-
-
Dominski, Z.1
Erkmann, J.A.2
Yang, X.3
Sanchez, R.4
Marzluff, W.F.5
-
12
-
-
0031026161
-
The poly(A) tail inhibits the assembly of a 3′-to-5′ exonuclease in an in vitro RNA stability system
-
Ford L.P., Bagga P.S., Wilusz J. The poly(A) tail inhibits the assembly of a 3′-to-5′ exonuclease in an in vitro RNA stability system. Mol. Cell. Biol. 17:1997;398-406.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 398-406
-
-
Ford, L.P.1
Bagga, P.S.2
Wilusz, J.3
-
13
-
-
0031883640
-
Functional importance of conserved nucleotides at the histone RNA 3′ processing site
-
Furger A., Schaller A., Schümperli D. Functional importance of conserved nucleotides at the histone RNA 3′ processing site. RNA. 4:1998;246-256.
-
(1998)
RNA
, vol.4
, pp. 246-256
-
-
Furger, A.1
Schaller, A.2
Schümperli, D.3
-
14
-
-
0033680082
-
Interaction between a poly(A)-specific ribonuclease and the 5′ cap influences mRNA deadenylation rates in vitro
-
Gao M., Fritz D.T., Ford L.P., Wilusz J. Interaction between a poly(A)-specific ribonuclease and the 5′ cap influences mRNA deadenylation rates in vitro. Mol. Cell. 5:2000;479-488.
-
(2000)
Mol. Cell
, vol.5
, pp. 479-488
-
-
Gao, M.1
Fritz, D.T.2
Ford, L.P.3
Wilusz, J.4
-
15
-
-
0023666085
-
Translation is required for regulation of histone mRNA degradation
-
Graves R.A., Pandey N.B., Chodchoy N., Marzluff W.F. Translation is required for regulation of histone mRNA degradation. Cell. 48:1987;615-626.
-
(1987)
Cell
, vol.48
, pp. 615-626
-
-
Graves, R.A.1
Pandey, N.B.2
Chodchoy, N.3
Marzluff, W.F.4
-
16
-
-
0030061126
-
Efficient extraction and partial purification of the polyribosomal-associated stem-loop binding protein bound to the 3′ end of histone mRNA
-
Hanson R.J., Sun J.-H., Willis D.G., Marzluff W.F. Efficient extraction and partial purification of the polyribosomal-associated stem-loop binding protein bound to the 3′ end of histone mRNA. Biochemistry. 35:1996;2146-2156.
-
(1996)
Biochemistry
, vol.35
, pp. 2146-2156
-
-
Hanson, R.J.1
Sun, J.-H.2
Willis, D.G.3
Marzluff, W.F.4
-
17
-
-
0026355522
-
Regulation of histone mRNA in the unperturbed cell cycle: Evidence suggesting control at two posttranscriptional steps
-
Harris M.E., Böhni R., Schneiderman M.H., Ramamurthy L., Schümperli D., Marzluff W.F. Regulation of histone mRNA in the unperturbed cell cycle. evidence suggesting control at two posttranscriptional steps Mol. Cell. Biol. 11:1991;2416-2424.
-
(1991)
Mol. Cell. Biol.
, vol.11
, pp. 2416-2424
-
-
Harris, M.E.1
Böhni, R.2
Schneiderman, M.H.3
Ramamurthy, L.4
Schümperli, D.5
Marzluff, W.F.6
-
18
-
-
0033801353
-
SAF-Box, a conserved protein domain that specifically recognizes scaffold attachment region DNA
-
Kipp M., Gohring F., Ostendorp T., van Drunen C.M., Van Driel R., Przybylski M., Fackelmayer F.O. SAF-Box, a conserved protein domain that specifically recognizes scaffold attachment region DNA. Mol. Cell. Biol. 20:2000;7480-7489.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 7480-7489
-
-
Kipp, M.1
Gohring, F.2
Ostendorp, T.3
Van Drunen, C.M.4
Van Driel, R.5
Przybylski, M.6
Fackelmayer, F.O.7
-
19
-
-
0036124889
-
Developmental control of histone mRNA and dSLBP synthesis during Drosophila embryogenesis and the role of dSLBP in histone mRNA 3′ processing in vivo
-
Lanzotti D.J., Kaygun H., Yang X., Duronio R.J., Marzluff W.F. Developmental control of histone mRNA and dSLBP synthesis during Drosophila embryogenesis and the role of dSLBP in histone mRNA 3′ processing in vivo. Mol. Cell. Biol. 22:2002;2267-2282.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 2267-2282
-
-
Lanzotti, D.J.1
Kaygun, H.2
Yang, X.3
Duronio, R.J.4
Marzluff, W.F.5
-
20
-
-
0036827006
-
The histone 3′ terminal stem-loop-binding protein enhances translation through a functional and physical interaction with eucaryotic initiation factor 4G (eIF4G) and eIF3
-
Ling J., Morley S.J., Pain V.M., Marzluff W.F., Gallie D.R. The histone 3′ terminal stem-loop-binding protein enhances translation through a functional and physical interaction with eucaryotic initiation factor 4G (eIF4G) and eIF3. Mol. Cell. Biol. 22:2002;7853-7867.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 7853-7867
-
-
Ling, J.1
Morley, S.J.2
Pain, V.M.3
Marzluff, W.F.4
Gallie, D.R.5
-
21
-
-
0031039529
-
The gene for histone RNA hairpin binding protein is located on human chromosome 4 and encodes a novel type of RNA binding protein
-
Martin F., Schaller A., Eglite S., Schümperli D., Müller B. The gene for histone RNA hairpin binding protein is located on human chromosome 4 and encodes a novel type of RNA binding protein. EMBO J. 16:1997;769-778.
-
(1997)
EMBO J.
, vol.16
, pp. 769-778
-
-
Martin, F.1
Schaller, A.2
Eglite, S.3
Schümperli, D.4
Müller, B.5
-
22
-
-
0034176650
-
Positive and negative mutant selection in the human histone hairpin-binding protein using the yeast three-hybrid system
-
Martin F., Michel F., Zenklusen D., Müller B., Schümperli D. Positive and negative mutant selection in the human histone hairpin-binding protein using the yeast three-hybrid system. Nucleic Acids Res. 28:2000;1594-1603.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 1594-1603
-
-
Martin, F.1
Michel, F.2
Zenklusen, D.3
Müller, B.4
Schümperli, D.5
-
23
-
-
0036898897
-
Histone mRNA expression: Multiple levels of cell cycle regulation and important developmental consequences
-
Marzluff W.F., Duronio R.J. Histone mRNA expression. multiple levels of cell cycle regulation and important developmental consequences Curr. Opin. Cell Biol. 14:2002;692-699.
-
(2002)
Curr. Opin. Cell Biol.
, vol.14
, pp. 692-699
-
-
Marzluff, W.F.1
Duronio, R.J.2
-
24
-
-
0036429193
-
The human and mouse replication-dependent histone genes
-
Marzluff W.F., Gongidi P., Woods K.R., Jin J.P., Maltais L. The human and mouse replication-dependent histone genes. Genomics. 80:2002;487-498.
-
(2002)
Genomics
, vol.80
, pp. 487-498
-
-
Marzluff, W.F.1
Gongidi, P.2
Woods, K.R.3
Jin, J.P.4
Maltais, L.5
-
25
-
-
0030702085
-
The exosome: A conserved eukaryotic RNA processing complex containing multiple 3′→5′ exoribonucleases
-
Mitchell P., Petfalski E., Shevchenko A., Mann M., Tollervey D. The exosome. a conserved eukaryotic RNA processing complex containing multiple 3′→5′ exoribonucleases Cell. 91:1997;457-466.
-
(1997)
Cell
, vol.91
, pp. 457-466
-
-
Mitchell, P.1
Petfalski, E.2
Shevchenko, A.3
Mann, M.4
Tollervey, D.5
-
26
-
-
0032870204
-
Structural motifs in RNA
-
Moore P.B. Structural motifs in RNA. Annu. Rev. Biochem. 68:1999;287-300.
-
(1999)
Annu. Rev. Biochem.
, vol.68
, pp. 287-300
-
-
Moore, P.B.1
-
27
-
-
0023579211
-
Identification of the human U7 snRNP as one of several factors involved in the 3′ end maturation of histone premessenger RNA's
-
Mowry K.L., Steitz J.A. Identification of the human U7 snRNP as one of several factors involved in the 3′ end maturation of histone premessenger RNA's. Science. 238:1987;1682-1687.
-
(1987)
Science
, vol.238
, pp. 1682-1687
-
-
Mowry, K.L.1
Steitz, J.A.2
-
28
-
-
0028202495
-
Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5′→3′ digestion of the transcript
-
Muhlrad D., Decker C.J., Parker R. Deadenylation of the unstable mRNA encoded by the yeast MFA2 gene leads to decapping followed by 5′→3′ digestion of the transcript. Genes Dev. 8:1994;855-866.
-
(1994)
Genes Dev.
, vol.8
, pp. 855-866
-
-
Muhlrad, D.1
Decker, C.J.2
Parker, R.3
-
29
-
-
0001441205
-
The U7 snRNP and the hairpin binding protein: Key players in histone mRNA metabolism
-
Muller B., Schumperli D. The U7 snRNP and the hairpin binding protein. key players in histone mRNA metabolism Semin. Cell Dev. Biol. 8:1997;567-576.
-
(1997)
Semin. Cell Dev. Biol.
, vol.8
, pp. 567-576
-
-
Muller, B.1
Schumperli, D.2
-
30
-
-
0023462745
-
The stem-loop structure at the 3′ end of histone mRNA is necessary and sufficient for regulation of histone mRNA stability
-
Pandey N.B., Marzluff W.F. The stem-loop structure at the 3′ end of histone mRNA is necessary and sufficient for regulation of histone mRNA stability. Mol. Cell. Biol. 7:1987;4557-4559.
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 4557-4559
-
-
Pandey, N.B.1
Marzluff, W.F.2
-
31
-
-
0022979324
-
Histone mRNA degradation in vivo: The first detectable step occurs at or near the 3′ terminus
-
Ross J., Peltz S.W., Kobs G., Brewer G. Histone mRNA degradation in vivo. the first detectable step occurs at or near the 3′ terminus Mol. Cell. Biol. 6:1986;4362-4371.
-
(1986)
Mol. Cell. Biol.
, vol.6
, pp. 4362-4371
-
-
Ross, J.1
Peltz, S.W.2
Kobs, G.3
Brewer, G.4
-
32
-
-
0036786956
-
The stem-loop binding protein is required for efficient translation of histone mRNA in vivo and in vitro
-
Sanchez R., Marzluff W.F. The stem-loop binding protein is required for efficient translation of histone mRNA in vivo and in vitro. Mol. Cell. Biol. 22:2002;7093-7104.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 7093-7104
-
-
Sanchez, R.1
Marzluff, W.F.2
-
33
-
-
0028321764
-
The site of 3′ end formation of histone messenger RNA is a fixed distance from the downstream element recognized by the U7 snRNP
-
Scharl E.C., Steitz J.A. The site of 3′ end formation of histone messenger RNA is a fixed distance from the downstream element recognized by the U7 snRNP. EMBO J. 13:1994;2432-2440.
-
(1994)
EMBO J.
, vol.13
, pp. 2432-2440
-
-
Scharl, E.C.1
Steitz, J.A.2
-
34
-
-
0029776689
-
A three-hybrid system to detect RNA-protein interactions in vivo
-
SenGupta D.J., Zhang B.L., Kraemer B., Prochart P., Fields S., Wickens M. A three-hybrid system to detect RNA-protein interactions in vivo. Proc. Natl. Acad. Sci. USA. 93:1996;8496-8501.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 8496-8501
-
-
SenGupta, D.J.1
Zhang, B.L.2
Kraemer, B.3
Prochart, P.4
Fields, S.5
Wickens, M.6
-
35
-
-
0034857262
-
DExD/H box RNA helicases: From generic motors to specific dissociation functions
-
Tanner N.K., Linder P. DExD/H box RNA helicases. from generic motors to specific dissociation functions Mol. Cell. 8:2001;251-262.
-
(2001)
Mol. Cell
, vol.8
, pp. 251-262
-
-
Tanner, N.K.1
Linder, P.2
-
36
-
-
0037086657
-
Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae
-
Tucker M., Staples R.R., Valencia-Sanchez M.A., Muhlrad D., Parker R. Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae. EMBO J. 21:2002;1427-1436.
-
(2002)
EMBO J.
, vol.21
, pp. 1427-1436
-
-
Tucker, M.1
Staples, R.R.2
Valencia-Sanchez, M.A.3
Muhlrad, D.4
Parker, R.5
-
37
-
-
0033057293
-
Identification of RNase T as a high-copy suppressor of the UV sensitivity associated with single-strand DNA exonuclease deficiency in Escherichia coli
-
Viswanathan M., Lanjuin A., Lovett S.T. Identification of RNase T as a high-copy suppressor of the UV sensitivity associated with single-strand DNA exonuclease deficiency in Escherichia coli. Genetics. 151:1999;929-934.
-
(1999)
Genetics
, vol.151
, pp. 929-934
-
-
Viswanathan, M.1
Lanjuin, A.2
Lovett, S.T.3
-
38
-
-
0035861864
-
Functional link between the mammalian exosome and mRNA decapping
-
Wang Z.R., Kiledjian M. Functional link between the mammalian exosome and mRNA decapping. Cell. 107:2001;751-762.
-
(2001)
Cell
, vol.107
, pp. 751-762
-
-
Wang, Z.R.1
Kiledjian, M.2
-
39
-
-
0029839610
-
The protein which binds the 3′ end of histone mRNA: A novel RNA-binding protein required for histone pre-mRNA processing
-
Wang Z.-F., Whitfield M.L., Ingledue T.I., Dominski Z., Marzluff W.F. The protein which binds the 3′ end of histone mRNA. a novel RNA-binding protein required for histone pre-mRNA processing Genes Dev. 10:1996;3028-3040.
-
(1996)
Genes Dev.
, vol.10
, pp. 3028-3040
-
-
Wang, Z.-F.1
Whitfield, M.L.2
Ingledue, T.I.3
Dominski, Z.4
Marzluff, W.F.5
-
40
-
-
0034128749
-
Stem-loop binding protein, the protein that binds the 3′ end of histone mRNA, is cell cycle regulated by both translational and posttranslational mechanisms
-
Whitfield M.L., Zheng L.-X., Baldwin A., Ohta T., Hurt M.M., Marzluff W.F. Stem-loop binding protein, the protein that binds the 3′ end of histone mRNA, is cell cycle regulated by both translational and posttranslational mechanisms. Mol. Cell. Biol. 20:2000;4188-4198.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 4188-4198
-
-
Whitfield, M.L.1
Zheng, L.-X.2
Baldwin, A.3
Ohta, T.4
Hurt, M.M.5
Marzluff, W.F.6
-
41
-
-
0028953185
-
The sequence of the stem and flanking sequences at the 3′ end of histone mRNA are critical determinants for the binding of the stem-loop binding protein
-
Williams A.S., Marzluff W.F. The sequence of the stem and flanking sequences at the 3′ end of histone mRNA are critical determinants for the binding of the stem-loop binding protein. Nucleic Acids Res. 23:1995;654-662.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 654-662
-
-
Williams, A.S.1
Marzluff, W.F.2
-
42
-
-
0032768938
-
Yeast three-hybrid system to detect and analyze interactions between RNA and protein
-
Zhang B.L., Kraemer B., SenGupta D., Fields S., Wickens M. Yeast three-hybrid system to detect and analyze interactions between RNA and protein. Methods Enzymol. 306:1999;93-113.
-
(1999)
Methods Enzymol.
, vol.306
, pp. 93-113
-
-
Zhang, B.L.1
Kraemer, B.2
SenGupta, D.3
Fields, S.4
Wickens, M.5
-
43
-
-
0033569848
-
The DNase activity of RNase T and its application to DNA cloning
-
Zuo Y., Deutscher M.P. The DNase activity of RNase T and its application to DNA cloning. Nucleic Acids Res. 27:1999;4077-4082.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 4077-4082
-
-
Zuo, Y.1
Deutscher, M.P.2
-
44
-
-
0035283033
-
Exoribonuclease superfamilies: Structural analysis and phylogenetic distribution
-
Zuo Y., Deutscher M.P. Exoribonuclease superfamilies. structural analysis and phylogenetic distribution Nucleic Acids Res. 29:2001;1017-1026.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 1017-1026
-
-
Zuo, Y.1
Deutscher, M.P.2
-
45
-
-
0037119408
-
The physiological role of RNase T can be explained by its unusual substrate specificity
-
Zuo Y., Deutscher M.P. The physiological role of RNase T can be explained by its unusual substrate specificity. J. Biol. Chem. 277:2002;29654-29661.
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 29654-29661
-
-
Zuo, Y.1
Deutscher, M.P.2
|