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Volumn 10, Issue 21, 2003, Pages 1830-1840

Branched oligonucleotides induce in vivo gene conversion of a mutated EGFP reporter

Author keywords

Branched oligonucleotides; Recombination; Targeted gene conversion

Indexed keywords

COMPLEMENTARY DNA; GENE PRODUCT; GREEN FLUORESCENT PROTEIN; MONOMER; OLIGONUCLEOTIDE; PROTEIN ANTIBODY;

EID: 0141613924     PISSN: 09697128     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.gt.3302079     Document Type: Article
Times cited : (21)

References (47)
  • 1
    • 0024328536 scopus 로고
    • Altering the genome by homologous recombination
    • Capecchi MR. Altering the genome by homologous recombination. Science 1989; 244: 1288-1292.
    • (1989) Science , vol.244 , pp. 1288-1292
    • Capecchi, M.R.1
  • 2
    • 0032931129 scopus 로고    scopus 로고
    • Homologous recombination based gene therapy
    • Lai LW, Lien YH. Homologous recombination based gene therapy. Exp Nephrol 1999; 7: 11-14.
    • (1999) Exp. Nephrol. , vol.7 , pp. 11-14
    • Lai, L.W.1    Lien, Y.H.2
  • 3
    • 0034255314 scopus 로고    scopus 로고
    • Genetic analysis of homologous DNA recombination in vertebrate somatic cells
    • Morrison C, Takeda S. Genetic analysis of homologous DNA recombination in vertebrate somatic cells. Int J Biochem Cell Biol 2000; 32: 817-831.
    • (2000) Int. J. Biochem. Cell Biol. , vol.32 , pp. 817-831
    • Morrison, C.1    Takeda, S.2
  • 4
    • 0035902467 scopus 로고    scopus 로고
    • Homologous DNA recombination in vertebrate cells
    • Sonoda E et al. Homologous DNA recombination in vertebrate cells. Proc Natl Acad Sci USA 2001; 98: 8388-8394.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 8388-8394
    • Sonoda, E.1
  • 5
    • 0034743499 scopus 로고    scopus 로고
    • Expression of DeltaF508 CFTR in normal mouse lung after site-specific modification of CFTR sequences by SFHR
    • Goncz KK et al. Expression of DeltaF508 CFTR in normal mouse lung after site-specific modification of CFTR sequences by SFHR. Gene Therapy 2001; 8: 961-965.
    • (2001) Gene Therapy , vol.8 , pp. 961-965
    • Goncz, K.K.1
  • 6
    • 0034327613 scopus 로고    scopus 로고
    • The DNA strand of chimeric RNA/DNA oligonucleotides can direct gene repair/conversion activity in mammalian and plant cell-free extracts
    • Gamper HB et al. The DNA strand of chimeric RNA/DNA oligonucleotides can direct gene repair/conversion activity in mammalian and plant cell-free extracts. Nucleic Acids Res 2000; 28: 4332-4339.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 4332-4339
    • Gamper, H.B.1
  • 7
    • 0036268304 scopus 로고    scopus 로고
    • Targeted gene correction in the mdx mouse using short DNA fragments: Towards application with bone marrow-derived cells for autologous remodeling of dystrophic muscle
    • Kapsa RM et al. Targeted gene correction in the mdx mouse using short DNA fragments: towards application with bone marrow-derived cells for autologous remodeling of dystrophic muscle. Gene Therapy 2002; 9: 695-699.
    • (2002) Gene Therapy , vol.9 , pp. 695-699
    • Kapsa, R.M.1
  • 8
    • 0036272395 scopus 로고    scopus 로고
    • Optimising gene repair strategies in cell culture
    • Thorpe P, Stevenson BJ, Porteous DJ. Optimising gene repair strategies in cell culture. Gene Therapy 2002; 9: 700-702.
    • (2002) Gene Therapy , vol.9 , pp. 700-702
    • Thorpe, P.1    Stevenson, B.J.2    Porteous, D.J.3
  • 9
    • 0035066680 scopus 로고    scopus 로고
    • Persistent failures in gene repair
    • van der SG et al. Persistent failures in gene repair. Nat Biotechnol 2001; 19: 305-306.
    • (2001) Nat. Biotechnol. , vol.19 , pp. 305-306
    • van der, S.G.1
  • 10
    • 0034724438 scopus 로고    scopus 로고
    • Unambiguous demonstration of triple-helix-directed gene modification
    • Barre FX et al. Unambiguous demonstration of triple-helix-directed gene modification. Proc Natl Acad Sci USA 2000; 97: 3084-3088.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 3084-3088
    • Barre, F.X.1
  • 11
    • 0030075797 scopus 로고    scopus 로고
    • Triplex-mediated, in vitro targeting of psoralen photoadducts within the genome of a transgenic mouse
    • Gunther EJ, Havre PA, Gasparro FP, Glazer PM. Triplex-mediated, in vitro targeting of psoralen photoadducts within the genome of a transgenic mouse. Photochem Photobiol 1996; 63: 207-212.
    • (1996) Photochem. Photobiol. , vol.63 , pp. 207-212
    • Gunther, E.J.1    Havre, P.A.2    Gasparro, F.P.3    Glazer, P.M.4
  • 12
    • 0034255524 scopus 로고    scopus 로고
    • High-frequency intrachromosomal gene conversion induced by triplex-forming oligonucleotides microinjected into mouse cells
    • Luo Z, Macris MA, Faruqi AF, Glazer PM. High-frequency intrachromosomal gene conversion induced by triplex-forming oligonucleotides microinjected into mouse cells. Proc Natl Acad Sci USA 2000; 97: 9003-9008.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 9003-9008
    • Luo, Z.1    Macris, M.A.2    Faruqi, A.F.3    Glazer, P.M.4
  • 13
    • 0034286923 scopus 로고    scopus 로고
    • Binding and photoreactivity of psoralen linked to triple helix-forming oligonucleotides
    • Oh DH, Hanawalt PC. Binding and photoreactivity of psoralen linked to triple helix-forming oligonucleotides. Photochem Photobiol 2000; 72: 298-307.
    • (2000) Photochem. Photobiol. , vol.72 , pp. 298-307
    • Oh, D.H.1    Hanawalt, P.C.2
  • 14
    • 0030059301 scopus 로고    scopus 로고
    • Mutagenesis in mammalian cells induced by triple helix formation and transcription-coupled repair
    • Wang G, Seidman MM, Glazer PM. Mutagenesis in mammalian cells induced by triple helix formation and transcription-coupled repair. Science 1996; 271: 802-805.
    • (1996) Science , vol.271 , pp. 802-805
    • Wang, G.1    Seidman, M.M.2    Glazer, P.M.3
  • 15
    • 0030075797 scopus 로고    scopus 로고
    • Triplex-mediated, in vitro targeting of psoralen photoadducts within the genome of a transgenic mouse
    • Gunther EJ, Havre PA, Gasparro FP, Glazer PM. Triplex-mediated, in vitro targeting of psoralen photoadducts within the genome of a transgenic mouse. Photochem Photobiol 1996; 63: 207-212.
    • (1996) Photochem. Photobiol. , vol.63 , pp. 207-212
    • Gunther, E.J.1    Havre, P.A.2    Gasparro, F.P.3    Glazer, P.M.4
  • 16
    • 0034255524 scopus 로고    scopus 로고
    • High-frequency intrachromosomal gene conversion induced by triplex-forming oligonucleotides microinjected into mouse cells
    • Luo Z, Macris MA, Faruqi AF, Glazer PM. High-frequency intrachromosomal gene conversion induced by triplex-forming oligonucleotides microinjected into mouse cells. Proc Natl Acad Sci USA 2000; 97: 9003-9008.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 9003-9008
    • Luo, Z.1    Macris, M.A.2    Faruqi, A.F.3    Glazer, P.M.4
  • 17
    • 0034286923 scopus 로고    scopus 로고
    • Binding and photoreactivity of psoralen linked to triple helix-forming oligonucleotides
    • Oh DH, Hanawalt PC. Binding and photoreactivity of psoralen linked to triple helix-forming oligonucleotides. Photochem Photobiol 2000; 72: 298-307.
    • (2000) Photochem. Photobiol. , vol.72 , pp. 298-307
    • Oh, D.H.1    Hanawalt, P.C.2
  • 18
    • 0030059301 scopus 로고    scopus 로고
    • Mutagenesis in mammalian cells induced by triple helix formation and transcription-coupled repair
    • Wang G, Seidman MM, Glazer PM. Mutagenesis in mammalian cells induced by triple helix formation and transcription-coupled repair. Science 1996; 271: 802-805.
    • (1996) Science , vol.271 , pp. 802-805
    • Wang, G.1    Seidman, M.M.2    Glazer, P.M.3
  • 19
    • 0033597251 scopus 로고    scopus 로고
    • Targeted correction of an episomal gene in mammalian cells by a short DNA fragment tethered to a triplex-forming oligonucleotide
    • Chan PP et al. Targeted correction of an episomal gene in mammalian cells by a short DNA fragment tethered to a triplex-forming oligonucleotide. J Biol Chem 1999; 274: 11541-11548.
    • (1999) J. Biol. Chem. , vol.274 , pp. 11541-11548
    • Chan, P.P.1
  • 20
    • 0035947657 scopus 로고    scopus 로고
    • Triplex-induced recombination in human cell-free extracts: Dependence on XPA and HsRad 51
    • Datta HJ et al. Triplex-induced recombination in human cell-free extracts: Dependence on XPA and HsRad 51. J Biol Chem 2001; 276: 18018-18023.
    • (2001) J. Biol. Chem. , vol.276 , pp. 18018-18023
    • Datta, H.J.1
  • 21
    • 0033981578 scopus 로고    scopus 로고
    • Triple-helix formation induces recombination in mammalian cells via a nucleoticle excision repair-dependent pathway
    • Faruqi AF et al, Triple-helix formation induces recombination in mammalian cells via a nucleoticle excision repair-dependent pathway. Mol Cell Biol 2000; 20: 990-1000.
    • (2000) Mol. Cell Biol. , vol.20 , pp. 990-1000
    • Faruqi, A.F.1
  • 22
    • 0035475787 scopus 로고    scopus 로고
    • Triplex forming oligonucleotides: Sequence-specific tools for gene targeting
    • Knauert MP, Glazer PM. Triplex forming oligonucleotides: sequence-specific tools for gene targeting. Hum Mol Genet 2001; 10: 2243-2251.
    • (2001) Hum. Mol. Genet. , vol.10 , pp. 2243-2251
    • Knauert, M.P.1    Glazer, P.M.2
  • 23
    • 0025296015 scopus 로고
    • Site-specific cleavage of a yeast chromosome by oligonucleotide-directed triple-helix formation
    • Strobel SA, Dervan PB. Site-specific cleavage of a yeast chromosome by oligonucleotide-directed triple-helix formation. Science 1990; 249: 73-75.
    • (1990) Science , vol.249 , pp. 73-75
    • Strobel, S.A.1    Dervan, P.B.2
  • 24
    • 0033486098 scopus 로고    scopus 로고
    • A search for base analogs to enhance third-strand binding to 'inverted' target base pairs of triplexes in the pyrimidine/parallel motif
    • Amosova OA, Fresco JR. A search for base analogs to enhance third-strand binding to 'inverted' target base pairs of triplexes in the pyrimidine/parallel motif. Nucleic Acids Res 1999; 27: 4632-4635.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 4632-4635
    • Amosova, O.A.1    Fresco, J.R.2
  • 25
    • 0033550063 scopus 로고    scopus 로고
    • DNA triple helix formation at target sites containing several pyrimidine interruptions: Stabilization by protonated cytosine or 5-(1-propargylamino)dU
    • Gowers DM, Bijapur J, Brown T, Fox KR. DNA triple helix formation at target sites containing several pyrimidine interruptions: stabilization by protonated cytosine or 5-(1-propargylamino)dU. Biochemistry 1999; 38: 13747-13758.
    • (1999) Biochemistry , vol.38 , pp. 13747-13758
    • Gowers, D.M.1    Bijapur, J.2    Brown, T.3    Fox, K.R.4
  • 26
    • 0033118865 scopus 로고    scopus 로고
    • Towards mixed sequence recognition by triple helix formation
    • Gowers DM, Fox KR. Towards mixed sequence recognition by triple helix formation. Nucleic Acids Res 1999; 27: 1569-1577.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1569-1577
    • Gowers, D.M.1    Fox, K.R.2
  • 27
    • 0033550063 scopus 로고    scopus 로고
    • DNA triple helix formation at target sites containing several pyrimidine interruptions: Stabilization by protonated cytosine or 5-(1-propargylamino)dU
    • Gowers DM, Bijapur J, Brown T, Fox KR. DNA triple helix formation at target sites containing several pyrimidine interruptions: stabilization by protonated cytosine or 5-(1-propargylamino)dU. Biochemistry 1999; 38: 13747-13758.
    • (1999) Biochemistry , vol.38 , pp. 13747-13758
    • Gowers, D.M.1    Bijapur, J.2    Brown, T.3    Fox, K.R.4
  • 28
    • 0033118865 scopus 로고    scopus 로고
    • Towards mixed sequence recognition by triple helix formation
    • Gowers DM, Fox KR. Towards mixed sequence recognition by triple helix formation. Nucleic Acids Res 1999; 27: 1569-1577.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1569-1577
    • Gowers, D.M.1    Fox, K.R.2
  • 29
    • 0037062574 scopus 로고    scopus 로고
    • Stable DNA triple helix formation using oligonucleotides containing 2′-aminoethoxy,5-propargylamino-U
    • Sollogoub M et al. Stable DNA triple helix formation using oligonucleotides containing 2′-aminoethoxy,5-propargylamino-U. Biochemistry 2002; 41: 7224-7231.
    • (2002) Biochemistry , vol.41 , pp. 7224-7231
    • Sollogoub, M.1
  • 30
    • 0037445212 scopus 로고    scopus 로고
    • Targeted gene modification in mismatch-repair-deficient embryonic stem cells by single-stranded DNA oligonucleotides
    • Dekker M, Brouwers C, Te RH. Targeted gene modification in mismatch-repair-deficient embryonic stem cells by single-stranded DNA oligonucleotides. Nucleic Acids Res 2003; 31: E27.
    • (2003) Nucleic Acids Res. , vol.31
    • Dekker, M.1    Brouwers, C.2    Te, R.H.3
  • 31
    • 0036512266 scopus 로고    scopus 로고
    • Functional correction of episomal mutations with short DNA fragments and RNA-DNA oligonucleotides
    • Thorpe PH, Stevenson BJ, Porteous DJ. Functional correction of episomal mutations with short DNA fragments and RNA-DNA oligonucleotides. J Gene Med 2002; 4: 195-204.
    • (2002) J. Gene Med. , vol.4 , pp. 195-204
    • Thorpe, P.H.1    Stevenson, B.J.2    Porteous, D.J.3
  • 32
    • 0027325816 scopus 로고
    • Cloning of human, mouse and fission yeast recombination genes homologous to RAD51 and recA
    • Shinohara A et al. Cloning of human, mouse and fission yeast recombination genes homologous to RAD51 and recA. Nat Genet 1993; 4: 239-243.
    • (1993) Nat. Genet. , vol.4 , pp. 239-243
    • Shinohara, A.1
  • 33
    • 0032844787 scopus 로고    scopus 로고
    • Rad51/RecA protein families and the associated proteins in eukaryotes
    • Shmohara A, Ogawa T. Rad51/RecA protein families and the associated proteins in eukaryotes. Mutat Res 1999; 435: 13-21.
    • (1999) Mutat. Res. , vol.435 , pp. 13-21
    • Shmohara, A.1    Ogawa, T.2
  • 34
    • 0034161571 scopus 로고    scopus 로고
    • Tailed duplex DNA is the preferred substrate for Rad51 protein-mediated homologous pairing
    • Mazin AV, Zaitseva E, Sung P, Kowalczykowski SC. Tailed duplex DNA is the preferred substrate for Rad51 protein-mediated homologous pairing. EMBO J 2000; 19: 1148-1156.
    • (2000) EMBO J. , vol.19 , pp. 1148-1156
    • Mazin, A.V.1    Zaitseva, E.2    Sung, P.3    Kowalczykowski, S.C.4
  • 35
    • 0032169410 scopus 로고    scopus 로고
    • Branch migration during Rad51-promoted strand exchange proceeds in either direction
    • Namsaraev EA, Berg P. Branch migration during Rad51-promoted strand exchange proceeds in either direction. Proc Natl Acad Sci USA 1998; 95: 10477-10481.
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 10477-10481
    • Namsaraev, E.A.1    Berg, P.2
  • 36
    • 0027473181 scopus 로고
    • Mutant rodent cell lines sensitive to ultraviolet light, ionizing radiation and cross-linking agents: A comprehensive survey of genetic and biochemical characteristics
    • Collins AR. Mutant rodent cell lines sensitive to ultraviolet light, ionizing radiation and cross-linking agents: a comprehensive survey of genetic and biochemical characteristics. Mutat Res 1993; 293: 99-118.
    • (1993) Mutat. Res. , vol.293 , pp. 99-118
    • Collins, A.R.1
  • 37
    • 45949121186 scopus 로고
    • Isolation and cross-sensitivity of X-ray-sensitive mutants of V79-4 hamster cells
    • Jones NJ, Cox R, Thacker J. Isolation and cross-sensitivity of X-ray-sensitive mutants of V79-4 hamster cells. Mutat Res 1987; 183: 279-286.
    • (1987) Mutat. Res. , vol.183 , pp. 279-286
    • Jones, N.J.1    Cox, R.2    Thacker, J.3
  • 38
    • 0028888636 scopus 로고
    • Localization to chromosome 7q36.1 of the human XRCC2 gene, determining sensitivity to DNA-damaging agents
    • Thacker J et al. Localization to chromosome 7q36.1 of the human XRCC2 gene, determining sensitivity to DNA-damaging agents. Hum Mol Genet 1995; 4: 113-120.
    • (1995) Hum. Mol. Genet. , vol.4 , pp. 113-120
    • Thacker, J.1
  • 39
    • 0035933877 scopus 로고    scopus 로고
    • XRCC2 is a nuclear RAD51-like protein required for damage-dependent RAD51 focus formation without the need for ATP binding
    • O'Regan P, Wilson C, Townsend S, Thacker J. XRCC2 is a nuclear RAD51-like protein required for damage-dependent RAD51 focus formation without the need for ATP binding. J Biol Chem 2001; 276: 22148-22153.
    • (2001) J. Biol. Chem. , vol.276 , pp. 22148-22153
    • O'Regan, P.1    Wilson, C.2    Townsend, S.3    Thacker, J.4
  • 40
    • 0033598437 scopus 로고    scopus 로고
    • Mammalian XRCC2 promotes the repair of DNA double-strand breaks by homologous recombination
    • Johnson RD, Liu N, jasin M. Mammalian XRCC2 promotes the repair of DNA double-strand breaks by homologous recombination. Nature 1999; 401: 397-399.
    • (1999) Nature , vol.401 , pp. 397-399
    • Johnson, R.D.1    Liu, N.2    Jasin, M.3
  • 41
    • 0036097061 scopus 로고    scopus 로고
    • Strand bias in targeted gene repair is influenced by transcriptional activity
    • Liu L et al. Strand bias in targeted gene repair is influenced by transcriptional activity. Mol Cell Biol 2002; 22: 3852-3863.
    • (2002) Mol. Cell Biol. , vol.22 , pp. 3852-3863
    • Liu, L.1
  • 42
    • 0035902579 scopus 로고    scopus 로고
    • DNA replication meets genetic exchange: Chromosomal damage and its repair by homologous recombination
    • Kuzminov A. DNA replication meets genetic exchange: chromosomal damage and its repair by homologous recombination. Proc Natl Acad Sci USA 2001; 98: 8461-8468.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 8461-8468
    • Kuzminov, A.1
  • 43
    • 0036239950 scopus 로고    scopus 로고
    • Phosphodiester oligonucleotides inhibit mitosis and trigger apoptosis by a non-antisense, p53-mediated mechanism
    • Papucci L et al. Phosphodiester oligonucleotides inhibit mitosis and trigger apoptosis by a non-antisense, p53-mediated mechanism. Antisense Nucleic Acid Drug Dev 2002; 12: 21-31.
    • (2002) Antisense Nucleic Acid Drug Dev. , vol.12 , pp. 21-31
    • Papucci, L.1
  • 44
    • 0037809254 scopus 로고    scopus 로고
    • Single-stranded DNA induces ataxia telangiectasia mutant (ATM)/p53-dependent DNA damage and apoptotic signals
    • Nur-E-Kamal et al. Single-stranded DNA induces ataxia telangiectasia mutant (ATM)/p53-dependent DNA damage and apoptotic signals. J Biol Chem 2003; 278: 12475-12481.
    • (2003) J. Biol. Chem. , vol.278 , pp. 12475-12481
    • Nur-E-Kamal, A.1
  • 45
    • 0035093737 scopus 로고    scopus 로고
    • DNA double-strand breaks: Signaling, repair and the cancer connection
    • Khanna KK, Jackson SP. DNA double-strand breaks: signaling, repair and the cancer connection. Nat Genet 2001; 27: 247-254.
    • (2001) Nat. Genet. , vol.27 , pp. 247-254
    • Khanna, K.K.1    Jackson, S.P.2
  • 46
    • 0035902579 scopus 로고    scopus 로고
    • DNA replication meets genetic exchange: Chromosomal damage and its repair by homologous recombination
    • Kuzminov A. DNA replication meets genetic exchange: chromosomal damage and its repair by homologous recombination. Proc Natl Acad Sci USA 2001; 98: 8461-8468.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 8461-8468
    • Kuzminov, A.1
  • 47
    • 0037135262 scopus 로고    scopus 로고
    • Forebrain-specific promoter/enhancer D6 derived from the mouse Dach1 gene controls expression in neural stem cells
    • Machon O et al. Forebrain-specific promoter/enhancer D6 derived from the mouse Dach1 gene controls expression in neural stem cells. Neuroscience 2002; 112: 951-966.
    • (2002) Neuroscience , vol.112 , pp. 951-966
    • Machon, O.1


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