-
1
-
-
0037006795
-
Circadian cycling of the mouse liver transcriptome, as revealed by cDNA microarray, is driven by the suprachiasmatic nucleus
-
Akhtar RA, Reddy AB, Maywood ES, Clayton JD, King VM, Smith AG, Gant TW, Hastings MH, and Kyriacou CP (2002) Circadian cycling of the mouse liver transcriptome, as revealed by cDNA microarray, is driven by the suprachiasmatic nucleus. Curr Biol 12:540-550.
-
(2002)
Curr Biol
, vol.12
, pp. 540-550
-
-
Akhtar, R.A.1
Reddy, A.B.2
Maywood, E.S.3
Clayton, J.D.4
King, V.M.5
Smith, A.G.6
Gant, T.W.7
Hastings, M.H.8
Kyriacou, C.P.9
-
2
-
-
0037183901
-
Gene expression during the life cycle of Drosophila melanogaster
-
Arbeitman MN, Furlong EE, Imam F, Johnson E, Null BH, Baker BS, Krasnow MA, Scott MP, Davis RW, and White KP (2002) Gene expression during the life cycle of Drosophila melanogaster. Science 297:2270-2275.
-
(2002)
Science
, vol.297
, pp. 2270-2275
-
-
Arbeitman, M.N.1
Furlong, E.E.2
Imam, F.3
Johnson, E.4
Null, B.H.5
Baker, B.S.6
Krasnow, M.A.7
Scott, M.P.8
Davis, R.W.9
White, K.P.10
-
3
-
-
18544375333
-
MLL translocations specify a distinct gene expression profile that distinguishes a unique leukemia
-
Armstrong SA, Staunton JE, Silverman LB, Pieters R, den Boer ML, Minden MD, Sallan SE, Lander ES, Golub TR, and Korsmeyer SJ (2002) MLL translocations specify a distinct gene expression profile that distinguishes a unique leukemia. Nat Genet 30:41-47.
-
(2002)
Nat Genet
, vol.30
, pp. 41-47
-
-
Armstrong, S.A.1
Staunton, J.E.2
Silverman, L.B.3
Pieters, R.4
Den Boer, M.L.5
Minden, M.D.6
Sallan, S.E.7
Lander, E.S.8
Golub, T.R.9
Korsmeyer, S.J.10
-
4
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME): Toward standards for microarray data
-
Brazma A, Hingamp P, Quackenbush J, Sherlock G, Spellman P, Stoeckert C, Aach J, Ansorge W, Ball CA, Causton HC, Gaasterland T, Glenisson P, Holstege FC, Kim IF, Markowitz V, Matese JC, Parkinson H, Robinson A, Sarkans U, Schulze-Kremer S, Stewart J, Taylor R, Vilo J, and Vingron M (2001) Minimum information about a microarray experiment (MIAME): Toward standards for microarray data. Nat Genet 29:365-371.
-
(2001)
Nat Genet
, vol.29
, pp. 365-371
-
-
Brazma, A.1
Hingamp, P.2
Quackenbush, J.3
Sherlock, G.4
Spellman, P.5
Stoeckert, C.6
Aach, J.7
Ansorge, W.8
Ball, C.A.9
Causton, H.C.10
Gaasterland, T.11
Glenisson, P.12
Holstege, F.C.13
Kim, I.F.14
Markowitz, V.15
Matese, J.C.16
Parkinson, H.17
Robinson, A.18
Sarkans, U.19
Schulze-Kremer, S.20
Stewart, J.21
Taylor, R.22
Vilo, J.23
Vingron, M.24
more..
-
5
-
-
0036848612
-
Genome-wide expression analysis in Drosophila reveals genes controlling circadian behavior
-
Ceriani MF, Hogenesch JB, Yanovsky M, Panda S, Straume M, and Kay SA (2002) Genome-wide expression analysis in Drosophila reveals genes controlling circadian behavior. J Neurosci 22:9305-9319.
-
(2002)
J Neurosci
, vol.22
, pp. 9305-9319
-
-
Ceriani, M.F.1
Hogenesch, J.B.2
Yanovsky, M.3
Panda, S.4
Straume, M.5
Kay, S.A.6
-
6
-
-
10244219858
-
Accessing genetic information with high-density DNA arrays
-
Chee M, Yang R, Hubbell E, Berno A, Huang XC, Stern D, Winkler J, Lockhart DJ, Morris MS, and Fodor SP (1996) Accessing genetic information with high-density DNA arrays. Science 274:610-614.
-
(1996)
Science
, vol.274
, pp. 610-614
-
-
Chee, M.1
Yang, R.2
Hubbell, E.3
Berno, A.4
Huang, X.C.5
Stern, D.6
Winkler, J.7
Lockhart, D.J.8
Morris, M.S.9
Fodor, S.P.10
-
7
-
-
0032584227
-
Parallel analysis of genetic selections using whole genome oligonucleotide arrays
-
Cho RJ, Fromont-Racine M, Wodicka L, Feierbach B, Stearns T, Legrain P, Lockhart DJ, and Davis RW (1998) Parallel analysis of genetic selections using whole genome oligonucleotide arrays. Proc Natl Acad Sci USA 95:3752-3757.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 3752-3757
-
-
Cho, R.J.1
Fromont-Racine, M.2
Wodicka, L.3
Feierbach, B.4
Stearns, T.5
Legrain, P.6
Lockhart, D.J.7
Davis, R.W.8
-
8
-
-
0035923746
-
Circadian regulation of gene expression systems in the Drosophila head
-
Claridge-Chang A, Wijnen H, Naef F, Boothroyd C, Rajewsky N, and Young MW (2001) Circadian regulation of gene expression systems in the Drosophila head. Neuron 32:657-671.
-
(2001)
Neuron
, vol.32
, pp. 657-671
-
-
Claridge-Chang, A.1
Wijnen, H.2
Naef, F.3
Boothroyd, C.4
Rajewsky, N.5
Young, M.W.6
-
9
-
-
0037006807
-
Circadian programs of transcriptional activation, signaling, and protein turnover revealed by microarray analysis of mammalian cells
-
Duffield GE, Best JD, Meurers BH, Bittner A, Loros JJ, and Dunlap JC (2002) Circadian programs of transcriptional activation, signaling, and protein turnover revealed by microarray analysis of mammalian cells. Curr Biol 12:551-557.
-
(2002)
Curr Biol
, vol.12
, pp. 551-557
-
-
Duffield, G.E.1
Best, J.D.2
Meurers, B.H.3
Bittner, A.4
Loros, J.J.5
Dunlap, J.C.6
-
10
-
-
0033593306
-
Molecular bases for circadian clocks
-
Dunlap JC (1999) Molecular bases for circadian clocks. Cell 96:271-290.
-
(1999)
Cell
, vol.96
, pp. 271-290
-
-
Dunlap, J.C.1
-
12
-
-
0033711710
-
Microarrays and cell cycle transcription in yeast
-
Futcher, B (2000) Microarrays and cell cycle transcription in yeast. Curr Opin Cell Biol 12:710-715.
-
(2000)
Curr Opin Cell Biol
, vol.12
, pp. 710-715
-
-
Futcher, B.1
-
13
-
-
0035377403
-
Sharing gene expression data: An array of options
-
Geschwind DH (2001) Sharing gene expression data: An array of options. Nat Rev Neurosci 2:435-438.
-
(2001)
Nat Rev Neurosci
, vol.2
, pp. 435-438
-
-
Geschwind, D.H.1
-
14
-
-
0037173615
-
Functional profiling of the Saccharomyces cerevisiae genome
-
Giaever G, Chu AM, Ni L, Connelly C, Riles L, Veronneau S, Dow S, Lucau-Danila A, Anderson K, Andre B, Arkin AP, Astromoff A, El-Bakkoury M, Bangham R, Benito R, Brachat S, Campanaro S, Curtiss M, Davis K, Deutschbauer A, Entian KD, Flaherty P, Foury F, Garfinkel DJ, Gerstein M, Gotte D, Guldener U, Hegemann JH, Hempel S, Herman Z, Jaramillo DF, Kelly DE, Kelly SL, Kotter P, LaBonte D, Lamb DC, Lan N, Liang H, Liao H, Liu L, Luo C, Lussier M, Mao R, Menard P, Ooi SL, Revuelta JL, Roberts CJ, Rose M, Ross-Macdonald P, Scherens B, Schimmack G, Shafer B, Shoemaker DD, Sookhai-Mahadeo S, Storms RK, Strathern JN, Valle G, Voet M, Volckaert G, Wang CY, Ward TR, Wilhelmy J, Winzeler EA, Yang Y, Yen G, Youngman E, Yu K, Bussey H, Boeke JD, Snyder M, Philippsen P, Davis RW, and Johnston M (2002) Functional profiling of the Saccharomyces cerevisiae genome. Nature 418:387-391.
-
(2002)
Nature
, vol.418
, pp. 387-391
-
-
Giaever, G.1
Chu, A.M.2
Ni, L.3
Connelly, C.4
Riles, L.5
Veronneau, S.6
Dow, S.7
Lucau-Danila, A.8
Anderson, K.9
Andre, B.10
Arkin, A.P.11
Astromoff, A.12
El-Bakkoury, M.13
Bangham, R.14
Benito, R.15
Brachat, S.16
Campanaro, S.17
Curtiss, M.18
Davis, K.19
Deutschbauer, A.20
Entian, K.D.21
Flaherty, P.22
Foury, F.23
Garfinkel, D.J.24
Gerstein, M.25
Gotte, D.26
Guldener, U.27
Hegemann, J.H.28
Hempel, S.29
Herman, Z.30
Jaramillo, D.F.31
Kelly, D.E.32
Kelly, S.L.33
Kotter, P.34
LaBonte, D.35
Lamb, D.C.36
Lan, N.37
Liang, H.38
Liao, H.39
Liu, L.40
Luo, C.41
Lussier, M.42
Mao, R.43
Menard, P.44
Ooi, S.L.45
Revuelta, J.L.46
Roberts, C.J.47
Rose, M.48
Ross-Macdonald, P.49
Scherens, B.50
Schimmack, G.51
Shafer, B.52
Shoemaker, D.D.53
Sookhai-Mahadeo, S.54
Storms, R.K.55
Strathern, J.N.56
Valle, G.57
Voet, M.58
Volckaert, G.59
Wang, C.Y.60
Ward, T.R.61
Wilhelmy, J.62
Winzeler, E.A.63
Yang, Y.64
Yen, G.65
Youngman, E.66
Yu, K.67
Bussey, H.68
Boeke, J.D.69
Snyder, M.70
Philippsen, P.71
Davis, R.W.72
Johnston, M.73
more..
-
15
-
-
0033569406
-
Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
-
Golub TR, Slonim DK, Tamayo P, Huard C, Gaasenbeek M, Mesirov JP, Coller H, Loh ML, Downing JR, Caligiuri MA, Bloomfield CD, and Lander ES (1999) Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring. Science 286:531-537.
-
(1999)
Science
, vol.286
, pp. 531-537
-
-
Golub, T.R.1
Slonim, D.K.2
Tamayo, P.3
Huard, C.4
Gaasenbeek, M.5
Mesirov, J.P.6
Coller, H.7
Loh, M.L.8
Downing, J.R.9
Caligiuri, M.A.10
Bloomfield, C.D.11
Lander, E.S.12
-
16
-
-
0035861573
-
Circadian regulation of diverse gene products revealed by mRNA expression profiling of synchronized fibroblasts
-
Grundschober C, Delaunay F, Puhlhofer A, Triqueneaux G, Laudet V, Bartfai T, and Nef P (2001) Circadian regulation of diverse gene products revealed by mRNA expression profiling of synchronized fibroblasts. J Biol Chem 276:46751-46758.
-
(2001)
J Biol Chem
, vol.276
, pp. 46751-46758
-
-
Grundschober, C.1
Delaunay, F.2
Puhlhofer, A.3
Triqueneaux, G.4
Laudet, V.5
Bartfai, T.6
Nef, P.7
-
17
-
-
0034671791
-
Orchestrated transcription of key pathways in arabidopsis by the circadian clock
-
Harmer SL, Hogenesch JB, Straume M, Chang HS, Han B, Zhu T, Wang X, Kreps JA, and Kay SA (2000) Orchestrated transcription of key pathways in arabidopsis by the circadian clock. Science 290:2110-2113.
-
(2000)
Science
, vol.290
, pp. 2110-2113
-
-
Harmer, S.L.1
Hogenesch, J.B.2
Straume, M.3
Chang, H.S.4
Han, B.5
Zhu, T.6
Wang, X.7
Kreps, J.A.8
Kay, S.A.9
-
18
-
-
0035072249
-
Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer
-
Hughes TR, Mao M, Jones AR, Burchard J, Marton MJ, Shannon KW, Lefkowitz SM, Ziman M, Schelter JM, Meyer MR, Kobayashi S, Davis C, Dai H, He YD, Stephaniants SB, Cavet G, Walker WL, West A, Coffey E, Shoemaker DD, Stoughton R, Blanchard AP, Friend SH, and Linsley PS (2001) Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer. Nat Biotechnol 19:342-347.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 342-347
-
-
Hughes, T.R.1
Mao, M.2
Jones, A.R.3
Burchard, J.4
Marton, M.J.5
Shannon, K.W.6
Lefkowitz, S.M.7
Ziman, M.8
Schelter, J.M.9
Meyer, M.R.10
Kobayashi, S.11
Davis, C.12
Dai, H.13
He, Y.D.14
Stephaniants, S.B.15
Cavet, G.16
Walker, W.L.17
West, A.18
Coffey, E.19
Shoemaker, D.D.20
Stoughton, R.21
Blanchard, A.P.22
Friend, S.H.23
Linsley, P.S.24
more..
-
19
-
-
0034616930
-
Functional discovery via a compendium of expression profiles
-
Hughes TR, Marton MJ, Jones AR, Roberts CJ, Stoughton R, Armour CD, Bennett HA, Coffey E, Dai H, He YD, Kidd MJ, King AM, Meyer MR, Slade D, Lum PY, Stepaniants SB, Shoemaker DD, Gachotte D, Chakraburtty K, Simon J, Bard M, and Friend SH (2000) Functional discovery via a compendium of expression profiles. Cell 102:109-126.
-
(2000)
Cell
, vol.102
, pp. 109-126
-
-
Hughes, T.R.1
Marton, M.J.2
Jones, A.R.3
Roberts, C.J.4
Stoughton, R.5
Armour, C.D.6
Bennett, H.A.7
Coffey, E.8
Dai, H.9
He, Y.D.10
Kidd, M.J.11
King, A.M.12
Meyer, M.R.13
Slade, D.14
Lum, P.Y.15
Stepaniants, S.B.16
Shoemaker, D.D.17
Gachotte, D.18
Chakraburtty, K.19
Simon, J.20
Bard, M.21
Friend, S.H.22
more..
-
20
-
-
0035805255
-
Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
-
Ideker T, Thorsson V, Ranish JA, Christmas R, Buhler J, Eng JK, Bumgarner R, Goodlett DR, Aebersold R, and Hood L (2001) Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science 292:929-934.
-
(2001)
Science
, vol.292
, pp. 929-934
-
-
Ideker, T.1
Thorsson, V.2
Ranish, J.A.3
Christmas, R.4
Buhler, J.5
Eng, J.K.6
Bumgarner, R.7
Goodlett, D.R.8
Aebersold, R.9
Hood, L.10
-
21
-
-
0035032570
-
Statistical design and the analysis of gene expression microarray data
-
Kerr MK and Churchill GA (2001) Statistical design and the analysis of gene expression microarray data. Genet Res 77:123-128.
-
(2001)
Genet Res
, vol.77
, pp. 123-128
-
-
Kerr, M.K.1
Churchill, G.A.2
-
22
-
-
0036152706
-
Implications of circadian gene expression in kidney, liver and the effects of fasting on pharmacogenomic studies
-
Kita Y, Shiozawa M, Jin W, Majewski RR, Besharse JC, Greene AS, and Jacob HJ (2002) Implications of circadian gene expression in kidney, liver and the effects of fasting on pharmacogenomic studies. Pharmacogenetics 12:55-65.
-
(2002)
Pharmacogenetics
, vol.12
, pp. 55-65
-
-
Kita, Y.1
Shiozawa, M.2
Jin, W.3
Majewski, R.R.4
Besharse, J.C.5
Greene, A.S.6
Jacob, H.J.7
-
23
-
-
0035377585
-
Analysis of circadian liver gene expression by ADDER, a highly sensitive method for the display of differentially expressed mRNAs
-
Kornmann B, Preitner N, Rifat D, Fleury-Olela F, and Schibler U. (2001) Analysis of circadian liver gene expression by ADDER, a highly sensitive method for the display of differentially expressed mRNAs. Nucleic Acids Res 29:E51-1.
-
(2001)
Nucleic Acids Res
, vol.29
-
-
Kornmann, B.1
Preitner, N.2
Rifat, D.3
Fleury-Olela, F.4
Schibler, U.5
-
24
-
-
0035930732
-
Regulation of daily locomotor activity and sleep by hypothalamic EGF receptor signaling
-
Kramer A, Yang FC, Snodgrass P, Li X, Scammell TE, Davis FC, and Weitz CJ (2001) Regulation of daily locomotor activity and sleep by hypothalamic EGF receptor signaling. Science 294:2511-2515.
-
(2001)
Science
, vol.294
, pp. 2511-2515
-
-
Kramer, A.1
Yang, F.C.2
Snodgrass, P.3
Li, X.4
Scammell, T.E.5
Davis, F.C.6
Weitz, C.J.7
-
25
-
-
0033388858
-
In vivo cross-linking and immunoprecipitation for studying dynamic Protein:DNA associations in a chromatin environment
-
Kuo MH and Allis CD (1999) In vivo cross-linking and immunoprecipitation for studying dynamic Protein:DNA associations in a chromatin environment. Methods 19:425-433.
-
(1999)
Methods
, vol.19
, pp. 425-433
-
-
Kuo, M.H.1
Allis, C.D.2
-
26
-
-
0035966317
-
Posttranslational mechanisms regulate the mammalian circadian clock
-
Lee C, Etchegaray JP, Cagampang FR, Loudon AS, and Reppert SM (2001) Posttranslational mechanisms regulate the mammalian circadian clock. Cell 107:855-867.
-
(2001)
Cell
, vol.107
, pp. 855-867
-
-
Lee, C.1
Etchegaray, J.P.2
Cagampang, F.R.3
Loudon, A.S.4
Reppert, S.M.5
-
27
-
-
0037047054
-
Influence of the period-dependent circadian clock on diurnal, circadian, and aperiodic gene expression in Drosophila melanogaster
-
Lin Y, Han M, Shimada B, Wang L, Gibler TM, Amarakone A, Awad TA, Stormo GD, Van Gelder RN, and Taghert PH (2002) Influence of the period-dependent circadian clock on diurnal, circadian, and aperiodic gene expression in Drosophila melanogaster. Proc Natl Acad Sci USA 99:9562-9567.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 9562-9567
-
-
Lin, Y.1
Han, M.2
Shimada, B.3
Wang, L.4
Gibler, T.M.5
Amarakone, A.6
Awad, T.A.7
Stormo, G.D.8
Van Gelder, R.N.9
Taghert, P.H.10
-
28
-
-
0034303643
-
Molecular profiling of human cancer
-
Liotta L and Petricoin E (2000) Molecular profiling of human cancer. Nat Rev Genet 1:48-56.
-
(2000)
Nat Rev Genet
, vol.1
, pp. 48-56
-
-
Liotta, L.1
Petricoin, E.2
-
29
-
-
0033662422
-
The transcriptome of Arabidopsis thaliana during systemic acquired resistance
-
Maleck K, Levine A, Eulgem T, Morgan A, Schmid J, Lawton KA, Dangl JL, and Dietrich RA (2000) The transcriptome of Arabidopsis thaliana during systemic acquired resistance. Nat Genet 26:403-410.
-
(2000)
Nat Genet
, vol.26
, pp. 403-410
-
-
Maleck, K.1
Levine, A.2
Eulgem, T.3
Morgan, A.4
Schmid, J.5
Lawton, K.A.6
Dangl, J.L.7
Dietrich, R.A.8
-
30
-
-
0035977158
-
Microarray analysis and organization of circadian gene expression in Drosophila
-
McDonald MJ and Rosbash M (2001) Microarray analysis and organization of circadian gene expression in Drosophila. Cell 107:567-578.
-
(2001)
Cell
, vol.107
, pp. 567-578
-
-
McDonald, M.J.1
Rosbash, M.2
-
31
-
-
0034161329
-
Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation
-
Orlando V (2000) Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation. Trends Biochem Sci 25:99-104.
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 99-104
-
-
Orlando, V.1
-
32
-
-
18444414586
-
Coordinated transcription of key pathways in the mouse by the circadian clock
-
Panda S, Antoch MP, Miller BH, Su AI, Schook AB, Straume M, Schultz PG, Kay SA, Takahashi JS, and Hogenesch JB (2002a) Coordinated transcription of key pathways in the mouse by the circadian clock. Cell 109:307-320.
-
(2002)
Cell
, vol.109
, pp. 307-320
-
-
Panda, S.1
Antoch, M.P.2
Miller, B.H.3
Su, A.I.4
Schook, A.B.5
Straume, M.6
Schultz, P.G.7
Kay, S.A.8
Takahashi, J.S.9
Hogenesch, J.B.10
-
33
-
-
0037118077
-
Circadian rhythms from flies to human
-
Panda S, Hogenesch JB, and Kay SA (2002b) Circadian rhythms from flies to human. Nature 417:329-335.
-
(2002)
Nature
, vol.417
, pp. 329-335
-
-
Panda, S.1
Hogenesch, J.B.2
Kay, S.A.3
-
34
-
-
0037178787
-
The orphan nuclear receptor REV-ERB-alpha controls circadian transcription within the positive limb of the mammalian circadian oscillator
-
Preitner N, Damiola F, Lopez-Molina L, Zakany J, Duboule D, Albrecht U, and Schibler U (2002) The orphan nuclear receptor REV-ERB-alpha controls circadian transcription within the positive limb of the mammalian circadian oscillator. Cell 110:251-260.
-
(2002)
Cell
, vol.110
, pp. 251-260
-
-
Preitner, N.1
Damiola, F.2
Lopez-Molina, L.3
Zakany, J.4
Duboule, D.5
Albrecht, U.6
Schibler, U.7
-
35
-
-
0034704248
-
Genome-wide location and function of DNA binding proteins
-
Ren B, Robert F, Wyrick JJ, Aparicio O, Jennings EG, Simon I, Zeitlinger J, Schreiber J, Hannett N, Kanin E, Volkert TL, Wilson CJ, Bell SP, and Young RA (2000) Genome-wide location and function of DNA binding proteins. Science 290:2306-2309.
-
(2000)
Science
, vol.290
, pp. 2306-2309
-
-
Ren, B.1
Robert, F.2
Wyrick, J.J.3
Aparicio, O.4
Jennings, E.G.5
Simon, I.6
Zeitlinger, J.7
Schreiber, J.8
Hannett, N.9
Kanin, E.10
Volkert, T.L.11
Wilson, C.J.12
Bell, S.P.13
Young, R.A.14
-
36
-
-
0037194790
-
Coordination of circadian timing in mammals
-
Reppert SM and Weaver DR (2002) Coordination of circadian timing in mammals. Nature 418:935-941.
-
(2002)
Nature
, vol.418
, pp. 935-941
-
-
Reppert, S.M.1
Weaver, D.R.2
-
37
-
-
0036262111
-
Analyzing array data using supervised methods
-
Ringner M, Peterson C, and Khan J (2002) Analyzing array data using supervised methods. Pharmacogenomics 3:403-415.
-
(2002)
Pharmacogenomics
, vol.3
, pp. 403-415
-
-
Ringner, M.1
Peterson, C.2
Khan, J.3
-
38
-
-
0037123767
-
Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases
-
Robyr D, Suka Y, Xenarios I, Kurdistani SK, Wang A, Suka N, and Grunstein M (2002) Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases. Cell 109:437-446.
-
(2002)
Cell
, vol.109
, pp. 437-446
-
-
Robyr, D.1
Suka, Y.2
Xenarios, I.3
Kurdistani, S.K.4
Wang, A.5
Suka, N.6
Grunstein, M.7
-
39
-
-
0035108613
-
Microarray analysis of diurnal and circadian-regulated genes in Arabidopsis
-
Schaffer R, Landgraf J, Accerbi M, Simon VV, Larson M, and Wisman E (2001) Microarray analysis of diurnal and circadian-regulated genes in Arabidopsis. Plant Cell 13:113-123.
-
(2001)
Plant Cell
, vol.13
, pp. 113-123
-
-
Schaffer, R.1
Landgraf, J.2
Accerbi, M.3
Simon, V.V.4
Larson, M.5
Wisman, E.6
-
40
-
-
0034910345
-
Navigating gene expression using microarrays - A technology review
-
Schulze A and Downward J (2001) Navigating gene expression using microarrays - a technology review. Nat Cell Biol 3:E190-5.
-
(2001)
Nat Cell Biol
, vol.3
-
-
Schulze, A.1
Downward, J.2
-
41
-
-
17944372930
-
Serial regulation of transcriptional regulators in the yeast cell cycle
-
Simon I, Barnett J, Hannett N, Harbison CT, Rinaldi NJ, Volkert TL, Wyrick JJ, Zeitlinger J, Gifford DK, Jaakkola TS, and Young RA (2001) Serial regulation of transcriptional regulators in the yeast cell cycle. Cell 106:697-708.
-
(2001)
Cell
, vol.106
, pp. 697-708
-
-
Simon, I.1
Barnett, J.2
Hannett, N.3
Harbison, C.T.4
Rinaldi, N.J.5
Volkert, T.L.6
Wyrick, J.J.7
Zeitlinger, J.8
Gifford, D.K.9
Jaakkola, T.S.10
Young, R.A.11
-
42
-
-
0037007625
-
Extensive and divergent circadian gene expression in liver and heart
-
Storch KF, Lipan O, Leykin I, Viswanathan N, Davis FC, Wong WH, and Weitz CJ (2002) Extensive and divergent circadian gene expression in liver and heart. Nature 417:78-83.
-
(2002)
Nature
, vol.417
, pp. 78-83
-
-
Storch, K.F.1
Lipan, O.2
Leykin, I.3
Viswanathan, N.4
Davis, F.C.5
Wong, W.H.6
Weitz, C.J.7
-
43
-
-
0036728568
-
Primer on medical genomics: Part III. Microarray experiments and data analysis
-
Tefferi A, Bolander ME, Ansell SM, Wieben ED, and Spelsberg TC (2002) Primer on medical genomics: Part III. Microarray experiments and data analysis. Mayo Clin Proc 77:927-940.
-
(2002)
Mayo Clin Proc
, vol.77
, pp. 927-940
-
-
Tefferi, A.1
Bolander, M.E.2
Ansell, S.M.3
Wieben, E.D.4
Spelsberg, T.C.5
-
44
-
-
0036740834
-
The circadian clock that controls gene expression in Arabidopsis is tissue specific
-
Thain SC, Murtas G, Lynn JR, McGrath RB, and Millar AJ (2002) The circadian clock that controls gene expression in Arabidopsis is tissue specific. Plant Physiol 130:102-110.
-
(2002)
Plant Physiol
, vol.130
, pp. 102-110
-
-
Thain, S.C.1
Murtas, G.2
Lynn, J.R.3
McGrath, R.B.4
Millar, A.J.5
-
45
-
-
0035213686
-
Identification of toxicologically predictive gene sets using cDNA microarrays
-
Thomas RS, Rank DR, Penn SG, Zastrow GM, Hayes KR, Pande K, Glover E, Silander T, Craven MW, Reddy JK, Jovanovich SB, and Bradfield CA (2001) Identification of toxicologically predictive gene sets using cDNA microarrays. Mol Pharmacol 60:1189-1194.
-
(2001)
Mol Pharmacol
, vol.60
, pp. 1189-1194
-
-
Thomas, R.S.1
Rank, D.R.2
Penn, S.G.3
Zastrow, G.M.4
Hayes, K.R.5
Pande, K.6
Glover, E.7
Silander, T.8
Craven, M.W.9
Reddy, J.K.10
Jovanovich, S.B.11
Bradfield, C.A.12
-
46
-
-
0035122576
-
Gene expression profile of the aging process in rat liver: Normalizing effects of growth hormone replacement
-
Tollet-Egnell P, Flores-Morales A, Stahlberg N, Malek RL, Lee N, and Norstedt G (2001) Gene expression profile of the aging process in rat liver: Normalizing effects of growth hormone replacement. Mol Endocrinol 15:308-318.
-
(2001)
Mol Endocrinol
, vol.15
, pp. 308-318
-
-
Tollet-Egnell, P.1
Flores-Morales, A.2
Stahlberg, N.3
Malek, R.L.4
Lee, N.5
Norstedt, G.6
-
47
-
-
0036682099
-
A transcription factor response element for gene expression during circadian night
-
Ueda HR, Chen W, Adachi A, Wakamatsu H, Hayashi S, Takasugi T, Nagano M, Nakahama K, Suzuki Y, Sugano S, Iino M, Shigeyoshi Y, and Hashimoto S (2002a) A transcription factor response element for gene expression during circadian night. Nature 418:534-539.
-
(2002)
Nature
, vol.418
, pp. 534-539
-
-
Ueda, H.R.1
Chen, W.2
Adachi, A.3
Wakamatsu, H.4
Hayashi, S.5
Takasugi, T.6
Nagano, M.7
Nakahama, K.8
Suzuki, Y.9
Sugano, S.10
Iino, M.11
Shigeyoshi, Y.12
Hashimoto, S.13
-
48
-
-
0037134445
-
Genome-wide transcriptional orchestration of circadian rhythms in Drosophila
-
Ueda HR, Matsumoto A, Kawamura M, Iino M, Tanimura T, and Hashimoto S (2002b) Genome-wide transcriptional orchestration of circadian rhythms in Drosophila. J Biol Chem 277:14048-14052.
-
(2002)
J Biol Chem
, vol.277
, pp. 14048-14052
-
-
Ueda, H.R.1
Matsumoto, A.2
Kawamura, M.3
Iino, M.4
Tanimura, T.5
Hashimoto, S.6
-
49
-
-
0036043671
-
Toxicogenomics and drug discovery: Will new technologies help us produce better drugs?
-
Ulrich R and Friend SH (2002) Toxicogenomics and drug discovery: Will new technologies help us produce better drugs? Nat Rev Drug Discov 1:84-88.
-
(2002)
Nat Rev Drug Discov
, vol.1
, pp. 84-88
-
-
Ulrich, R.1
Friend, S.H.2
-
50
-
-
0030002014
-
A novel circadianly expressed Drosophila melanogaster gene dependent on the period gene for its rhythmic expression
-
Van Gelder RN and Krasnow MA (1996) A novel circadianly expressed Drosophila melanogaster gene dependent on the period gene for its rhythmic expression. Embo J 15:1625-1631.
-
(1996)
Embo J
, vol.15
, pp. 1625-1631
-
-
Van Gelder, R.N.1
Krasnow, M.A.2
-
51
-
-
18244409687
-
Gene expression profiling predicts clinical outcome of breast cancer
-
van't Veer LJ, Dai H, van de Vijver MJ, He YD, Hart AA, Mao M, Peterse HL, van der Kooy K, Marton MJ, Witteveen AT, Schreiber GJ, Kerkhoven RM, Roberts C, Linsley PS, Bernards R, and Friend SH (2002) Gene expression profiling predicts clinical outcome of breast cancer. Nature 415:530-536.
-
(2002)
Nature
, vol.415
, pp. 530-536
-
-
Van't Veer, L.J.1
Dai, H.2
Van de Vijver, M.J.3
He, Y.D.4
Hart, A.A.5
Mao, M.6
Peterse, H.L.7
Van der Kooy, K.8
Marton, M.J.9
Witteveen, A.T.10
Schreiber, G.J.11
Kerkhoven, R.M.12
Roberts, C.13
Linsley, P.S.14
Bernards, R.15
Friend, S.H.16
-
52
-
-
0035861492
-
Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: High-resolution mapping of replication origins
-
Wyrick JJ, Aparicio JG, Chen T, Barnett JD, Jennings EG, Young RA, Bell SP, and Aparicio OM (2001) Genome-wide distribution of ORC and MCM proteins in S. cerevisiae: High-resolution mapping of replication origins. Science 294:2357-2360.
-
(2001)
Science
, vol.294
, pp. 2357-2360
-
-
Wyrick, J.J.1
Aparicio, J.G.2
Chen, T.3
Barnett, J.D.4
Jennings, E.G.5
Young, R.A.6
Bell, S.P.7
Aparicio, O.M.8
-
53
-
-
0035458732
-
Time zones: A comparative genetics of circadian clocks
-
Young MW and Kay SA (2001) Time zones: A comparative genetics of circadian clocks. Nat Rev Genet 2:702-715.
-
(2001)
Nat Rev Genet
, vol.2
, pp. 702-715
-
-
Young, M.W.1
Kay, S.A.2
-
54
-
-
0035799654
-
Microarrays of cells expressing defined cDNAs
-
Ziauddin J and Sabatini DM (2001) Microarrays of cells expressing defined cDNAs. Nature 411:107-110.
-
(2001)
Nature
, vol.411
, pp. 107-110
-
-
Ziauddin, J.1
Sabatini, D.M.2
|