Molecular phylogenetics of Anogramma species and related genera (Pteridaceae: Taenitidoideae)

Systematic Botany

Volumn 28, Issue 3, 2003, Pages 490-502

  Nakazato, Takuya ^a   Gastony, Gerald J ^a  

^a INDIANA UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANOGRAMMA; ANOGRAMMA CAESPITOSA; ANOGRAMMA CHAEROPHYLLA; ANOGRAMMA GUATEMALENSIS; ANOGRAMMA LEPTOPHYLLA; ANOGRAMMA LORENTZII; ANOGRAMMA NOVOGALICIANA; ANOGRAMMA OSTENIANA; BRYOPHYTES; CHEILANTHES; COSENTINIA VELLEA; JAMESONIA; PITYROGRAMMA; PTERIDACEAE; PTERIDOPHYTA;

EID: 0043011375     PISSN: 03636445     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (69)

1. BADRÉ, F. and T. REICHSTEIN. 1983. The two cytotypes of Notholaena lanuginosa (Sinopteridaceae, Pteridophyta). Willdenowia 13: 361-367.
2. _, A. F. TRYON, and R. DESCHATRES. 1982. Les espèces du genre Cheilanthes Swartz (Pteridaceae, Pteridophyta) en France. Webbia 36: 1-38.
3. BAROUTSIS, J. G. 1976. Cytology, morphology and developmental biology of the fern genus Anogramma. Ph.D. thesis, Indiana University, Bloomington.
4. _ and G. J. GASTONY. 1978. Chromosome numbers in the fern genus Anogramma, II. American Fern Journal 68: 3-6.
5. BENHAM, D. M. and M. D. WINDHAM. 1992. Generic affinities of the star-scaled cloak ferns. American Fern Journal 82: 47-58.
6. BOUSQUET, J., S. H. STRAUSS, A. H. DOERKSEN, and R. A. PRICE. 1992. Extensive variation in evolutionary rate of rbcL gene sequences among seed plants. Proceedings of the National Academy of Sciences of the United States of America 89: 7844-7848.
7. CHRISTENSEN, C. 1938. Filicinae. Pp. 522-550 in Manual of pteridology, ed. F. Verdoorn. The Hague: Nijhoff.
8. COPELAND, E. B. 1947. Genera filicum, the genera of ferns. Waltham, MA: Chronica Botanica.
9. DERIJK, P., Y. VANDEPEER, I. VANDENBROECK, and R. DEWACHTER. 1995. Evolution according to large ribosomal-subunit RNA. Journal of Molecular Evolution 41: 366-375.
10. DOMIN, K. 1928. Generis Pityrogramma (Link) species ac sectiones in clavem analyticam dispositae. Spisy vydávané přírodovědeckou fakultou Karlovy university 88: 1-10.
11. DOYLE, J. J. and J. L. DOYLE. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemistry Bulletin 19: 11-15.
12. FÉE, A. L. A. 1850-1852. Genera Filicum. Exposition des genres de la famille des Polypodiacées (classe de fougères). (Cinquième mémoire sur la famille des fougères). Strasbourg: Berger-Levrault.
13. FERRARINI, E., E CIAMPOLINI, R. E. G. PICHI SERMOLLI, and D. MARCHETTI. 1986. Iconographia palynologica pteridophytorum Italiae. Webbia 40: 1-202.
14. GASTONY, G. J. and J. G. BAROUTSIS. 1975. Chromosome numbers in the genus Anogramma. American Fern Journal 65: 71-75.
15. _ and W. JOHNSON. 2001. Phylogenetic placements of Loxoscaphe thecifera (Aspleniaceae) and Actiniopteris radiata (Pteridaceae) based on analysis of rbcL nucleotide sequences. American Fern Journal 91: 197-213.
16. _ and D. R. ROLLO. 1995. Phylogeny and generic circumscriptions of cheilanthoid ferns (Pteridaceae: Cheilanthoideae) inferred from rbcL nucleotide sequences. American Fern Journal 85: 341-360.
17. _ and M. C. UNGERER. 1997. Molecular systematics and a revised taxonomy of the onocleoid ferns (Dryopteridaceae: Onocleeae). American Journal of Botany 84: 840-849.
18. GAUT, B. S., S. V. MUSE, W. D. CLARK, and M. T. CLEGG. 1992. Relative rates of nucleotide substitution at the rbcL locus of monocotyledonous plants. Journal of Molecular Evolution 35: 292-303.
19. HASEBE, M., P. J. WOLF, K. M. PRYER, K. UEDA, M. ITO, R. SANO, G. J. GASTONY, J. YOKOYAMA, J. R. MANHART, N. MURAKAMI, E. H. CRANE, C. H. HAUFLER, and W. D. HAUK. 1995. Fern phylogeny based on rbcL nucleotide sequences. American Fern Journal 85: 134-181.
20. HAUFLER, C. H. and T. A. RANKER. 1995. rbcL sequences provide phylogenetic insights among sister species of the fern genus Polypodium. American Fern Journal 85: 361-374.
21. HOOKER, W. J. 1854. Icones plantarum. London: Longman.
22. HUELSENBECK, J. P. 1991. When are fossils better than extant taxa in phylogenetic analysis? Systematic Zoology 40: 458-469.
23. _ and F. RONQUIST. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755.
24. JOHNSON, K. P. 2001. Taxon sampling and the phylogenetic position of passeriformes: Evidence from 916 avian cytochrome b sequences. Systematic Biology 50: 128-136.
25. KIM, S.-C. and L. H. RIESEBERG. 1999. Genetic architecture of species differences in annual sunflowers: implications for adaptive trait introgression. Genetics 153: 965-977.
26. LOVIS, J. D., H. RASBACH, and T. REICHSTEIN. 1993. The chromosome number of Anogramma leptophylla (Adiantaceae: Pteridophyta) from New Zealand & South Africa. Fern Gazette 14: 149-154.
27. LUGARDON, B. 1963. Les spores des Pteridacées de France. Pollen et Spores 5: 325-336.
28. MAU, B., M. A. NEWTON, and B. LARGET. 1999. Bayesian phylogenetic inference via Markov chain Monte Carlo methods. Biometrics 55: 1-12.
29. MEHRA, P. N. and R. S. SANDHU. 1976. Morphology of the fern Anogramma leptophylla. Phytomorphology 26: 60-76.
30. MICKEL, J. T. 1992. Pteridophytes. Pp. 120-431 in Flora Novo-Galiciana: a descriptive account of the vascular plants of western Mexico, ed. R. McVaugh. Ann Arbor: The University of Michigan Herbarium.
31. _ and J. M. BEITEL. 1988. Pteridophyte flora of Oaxaca, Mexico. Memoirs of the New York Botanical Garden 46: 1-568.
32. MURPHY, W. J., E. EIZIRIK, W. E. JOHNSON, Y. P. ZHANG, O. A. RYDERK, and S. J. O'BRIEN. 2001. Molecular phylogenetics and the origins of placental mammals. Nature 409: 614-618.
33. NEI, M. and W. H. LI. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Sciences of the United States of America 76: 5269-5273.
34. NOVACEK, M. J. 1992. Fossils, topologies, missing data, and the higher level phylogeny of eutherian mammals. Systematic Biology 41: 58-73.
35. OMLAND, K. E., S. M. LANYON, and S. J. FRITZ. 1999. A molecular phylogeny of the new world orioles (Icterus): the importance of dense taxon sampling. Molecular Phylogenetics and Evolution 12: 224-239.
36. PICHI SERMOLLI, R. E. G. 1972. Fragmenta pteridologiae-III. Webbia 27: 389-460.
37. _. 1977. Tentamen pteridophytorum genera in taxonomicum ordinem redigendi. Webbia 31: 313-512.
38. _. 1985. The fern genus Cosentinia Todaro. Webbia 39: 179-189.
39. PLATNICK, N. I., C. E. GRISWOLD, and J. A. CODDINGTON. 1991. On missing entries in cladistic-analysis. Cladistics; the International Journal of the Willi Hennig Society 7: 337-343.
40. POE, S. 1998. Sensitivity of phylogeny estimation to taxonomic sampling. Systematic Biology 47: 18-31.
41. POSADA, D. and K. A. CRANDALL. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818.
42. RASBACH, H. and T. REICHSTEIN. 1990. The chromosome number of Anogramma leptophylla (Adiantaceae: Pteridophyta) from Europe. Fern Gazette 13: 341-348.
43. RIVAS-MARTÍNEZ, S. and A. E. SALVO. 1984. Sobre el género Cosentinia en la peninsula Ibérica. Anales del Jardin Botánico de Madrid 41: 196.
44. _, M. COSTA, J. IZCO, and C. SÁENZ. 1981. Flora Matritensis, I (Pteridophyta). Lazaroa 3: 25-61.
45. ROSENBERG, M. S. and S. KUMAR. 2001. Incomplete taxon sampling is not a problem for phylogenetic inference. Proceedings of the National Academy of Sciences of the United States of America 98: 10751-10756.
46. SÁENZ DE RIVAS, C. and S. RIVAS-MARTÍNEZ. 1979. Revision del genero Cheilanthes (Sinopteridaceae) en España. Lagascalia 8: 215-241.
47. SAITOU, N. and M. NEI. 1987. The neighbour joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4: 406-425.
48. SAUNDERS, M. A. and S. V. EDWARDS. 2000. Dynamics and phylogenetic implications of MtDNA control region sequences in New World jays (Ayes: Corvidae). Journal of Molecular Evolution 51: 97-109.
49. SMITH, A. R. 1981. Pteridophytes. Pp. 1-370 in Flora of Chiapas, ed. D. Breedlove. San Francisco: California Academy of Sciences.
50. SOLTIS, P. S., D. E. SOLTIS, P. G. WOLF, D. L. NICKRENT, S. CHAW, and R. L. CHAPMAN. 1999. The phylogeny of land plants inferred from 18S rDNA sequences: pushing the limits of rDNA signal? Molecular Biology and Evolution 16: 1774-1784.
51. STOLZE, R. G. 1981. Ferns and fern allies of Guatemala, part 2. Fieldiana Botany (n.s.) 6: 1-522.
52. SWOFFORD, D. L. 1998. PAUP*: phylogenetic analysis using parsimony (and other methods). Version 4.0b8. Sunderland: Sinauer Associates.
53. TODARO, A. 1866. Synopsis plantarum acotyledonearum vascularium sponte provenientium in Sicilia insulisque adjacentibus. Giornale de Scienze e delle Naturali ed Economiche di Palermo 1: 208-254.
54. TRYON, A. F. 1962. A monograph of the fern genus Jamesonia. Contributions from the Gray Herbarium of Harvard University 191: 109-197.
55. _. 1970. A monograph of the fern genus Eriosorus. Contributions from the Gray Herbarium of Harvard University 200: 54-174.
56. _ and B. LUGARDON. 1991. Spores of the Pteridophyta: surface, wall structure, and diversity based on electron microscope studies. New York: Springer-Verlag.
57. TRYON, R. 1962. Taxonomic fern notes II, Pityrogramma (including Trismeria) and Anogramma. Contributions from the Gray Herbarium of Harvard University 189: 52-76.
58. _ and A. F. TRYON. 1982. Ferns and allied plants with special reference to tropical America. New York: Springer-Verlag.
59. _, and K U. KRAMER. 1990. Pteridaceae. Pp. 230-256 in The families and genera of vascular plants. Vol. 1. Pteridophytes and gymnosperms, eds. K. U. Kramer and P. S. Green. New York: Springer-Verlag.
60. VIDA, G., A. MAJOR, and T. REICHSTEIN. 1983. Relations and evolution in Cheilanthes (Sinopteridaceae, Pteridophyta) in Macaronesia and Mediterranean area, deduced from genome analysis of their hybrids. Acta Botanica Malacitana 8: 101-126.
61. _, C. N. PAGE, T. G. WALKER, and T. REICHSTEIN. 1970. Cytologie der Farn-Gattung Cheilanthes in Europa und auf den Canarischen Inseln. Bauhinia 4: 225-253.
62. VOS, P., R. HOGERS, M. BLEEKER, M. REIJANS, T. VAN DE LEE, M. HORNES, A. FRIJTERS, J. POT, J. PELEMAN, M. KUIPER, and M. ZABEAU. 1995. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research 23: 4407-4414.
63. WIENS, J. J. 1998. Does adding characters with missing data increase or decrease phylogenetic accuracy? Systematic Biology 47: 625-640.
64. _ and T. W. REEDER. 1995. Combining data sets with different numbers of taxa for phylogenetic analysis. Systematic Biology 44: 548-558.
65. WILKINSON, M. 1995. Coping with abundant missing entries in phylogenetic inference using parsimony. Systematic Biology 44: 501-514.
66. WINDHAM, M. 1987. Argyrochosma, a new genus of cheilanthoid ferns. American Fern Journal 77: 37-41.
67. WOLF, P. J., P. S. SOLTIS, and D. E. SOLTIS. 1994. Phylogenetic relationships of dennstaedtioid ferns: evidence from rbcL sequences. Molecular Phylogenetics and Evolution 3: 383-392.
68. YODER, A. D. and J. A. IRWIN. 1999. Phylogeny of the Lemuridae: effects of character and taxon sampling on resolution of species relationships within Eulemur. Cladistics; the International Journal of the Willi Hennig Society 15: 351-361.
69. ZIMMER, B. 1991. Remarks on the Greek cheilanthoid ferns. Botanika Chronika 10: 211-237.