-
1
-
-
0001293249
-
Functional constraints and rbcL evidence for land plant phylogeny
-
ALBERT, V. A., A. BACKLUND, K. BREMER, M. W. CHASE, J. R. MANHART, B. D. MISHLER, and K. C. NIXON. 1994. Functional constraints and rbcL evidence for land plant phylogeny. Ann. Mo. Bot. Gard. 81:534-567.
-
(1994)
Ann. Mo. Bot. Gard.
, vol.81
, pp. 534-567
-
-
Albert, V.A.1
Backlund, A.2
Bremer, K.3
Chase, M.W.4
Manhart, J.R.5
Mishler, B.D.6
Nixon, K.C.7
-
2
-
-
0001674430
-
The phylogeny of plastids: A review based on comparisons of small-subunit ribosomal RNA coding regions
-
BHATTACHARYA, D., and L. MEDLIN. 1995. The phylogeny of plastids: a review based on comparisons of small-subunit ribosomal RNA coding regions. J. Phycol. 31:489-498.
-
(1995)
J. Phycol.
, vol.31
, pp. 489-498
-
-
Bhattacharya, D.1
Medlin, L.2
-
3
-
-
84989491914
-
Summary of green plant phylogeny and classification
-
BREMER, K. 1985. Summary of green plant phylogeny and classification. Cladistics 1:369-385.
-
(1985)
Cladistics
, vol.1
, pp. 369-385
-
-
Bremer, K.1
-
4
-
-
0001032167
-
On cladistic relationships in green plants
-
BREMER, K., C. J. HUMPHRIES, B. D. MISHLER, and S. P. CHURCHILL. 1987. On cladistic relationships in green plants. Taxon 36:339-349.
-
(1987)
Taxon
, vol.36
, pp. 339-349
-
-
Bremer, K.1
Humphries, C.J.2
Mishler, B.D.3
Churchill, S.P.4
-
5
-
-
0025817247
-
Phylogeny of the colonial green flagellates: A study of 18S and 26S rRNA sequence data
-
BUCHHEIM, M. A., and R. L. CHAPMAN. 1991. Phylogeny of the colonial green flagellates: a study of 18S and 26S rRNA sequence data. BioSystems 25:85-100.
-
(1991)
BioSystems
, vol.25
, pp. 85-100
-
-
Buchheim, M.A.1
Chapman, R.L.2
-
6
-
-
0028874305
-
A molecular phylogeny of bryophytes based on the nuclear encoded 18S rRNA genes
-
CAPESIUS, I. 1995. A molecular phylogeny of bryophytes based on the nuclear encoded 18S rRNA genes. J. Plant Physiol. 146:59-63.
-
(1995)
J. Plant Physiol.
, vol.146
, pp. 59-63
-
-
Capesius, I.1
-
7
-
-
0030726223
-
New classification of liverworts based on molecular and morphological data
-
CAPESIUS, I., and M. BOPP. 1997. New classification of liverworts based on molecular and morphological data. Plant Syst. Evol. 207:87-97.
-
(1997)
Plant Syst. Evol.
, vol.207
, pp. 87-97
-
-
Capesius, I.1
Bopp, M.2
-
8
-
-
0000360651
-
Ribosomal RNA gene sequences: Analysis and significance in the phylogeny and taxonomy of green algae
-
CHAPMAN, R. L., and M. A. BUCHHEIM. 1991. Ribosomal RNA gene sequences: analysis and significance in the phylogeny and taxonomy of green algae. CRC Crit. Rev. Plant Sci. 10: 343-368.
-
(1991)
CRC Crit. Rev. Plant Sci.
, vol.10
, pp. 343-368
-
-
Chapman, R.L.1
Buchheim, M.A.2
-
9
-
-
0001802416
-
Molecular systematics of the green algae
-
D. E. SOLTIS, P. S. SOLTIS, and J. J. DOYLE, eds. Kluwer Academic Publishers, Boston
-
CHAPMAN, R. L., M. A. BUCHHEIM, C. F. DELWICHE et al. (11 co-authors). 1998. Molecular systematics of the green algae. Pp. 508-540 in D. E. SOLTIS, P. S. SOLTIS, and J. J. DOYLE, eds. Molecular systematics of plants II. Kluwer Academic Publishers, Boston.
-
(1998)
Molecular Systematics of Plants II
, pp. 508-540
-
-
Chapman, R.L.1
Buchheim, M.A.2
Delwiche, C.F.3
-
10
-
-
0000985161
-
A perspective on the contribution of plastid rbcL DNA sequences to angiosperm phylogenetics
-
D. E. SOLTIS, P. S. SOLTIS, and J. J. DOYLE, eds. Kluwer Academic Publishers, Boston
-
CHASE, M. W., and V. A. ALBERT. 1998. A perspective on the contribution of plastid rbcL DNA sequences to angiosperm phylogenetics. Pp. 488-507 in D. E. SOLTIS, P. S. SOLTIS, and J. J. DOYLE, eds. Molecular systematics of plants II. Kluwer Academic Publishers, Boston.
-
(1998)
Molecular Systematics of Plants II
, pp. 488-507
-
-
Chase, M.W.1
Albert, V.A.2
-
11
-
-
0032575125
-
Gene sequences, collaboration and analysis of large data sets
-
CHASE, M. W., and A. V. COX. 1998. Gene sequences, collaboration and analysis of large data sets. Aust. Syst. Bot. 11: 215-229.
-
(1998)
Aust. Syst. Bot.
, vol.11
, pp. 215-229
-
-
Chase, M.W.1
Cox, A.V.2
-
12
-
-
0000031660
-
Phylogenetics of seed plants: An analysis of nucleotide sequences from the plastid gene rbcL
-
CHASE, M. W., D. E. SOLTIS, R. G. OLMSTEAD et al. (42 coauthors). 1993. Phylogenetics of seed plants: an analysis of nucleotide sequences from the plastid gene rbcL. Ann. Mo. Bot. Gard. 80:528-580.
-
(1993)
Ann. Mo. Bot. Gard.
, vol.80
, pp. 528-580
-
-
Chase, M.W.1
Soltis, D.E.2
Olmstead, R.G.3
-
13
-
-
0027332049
-
The phylogenetic position of Taxaceae based on 18S rRNA sequences
-
CHAW, S.-M., H. LONG, B.-S. WANG, A. ZHARKIKH, and W.-H. LI. 1993. The phylogenetic position of Taxaceae based on 18S rRNA sequences. J. Mol. Evol. 37:624-630.
-
(1993)
J. Mol. Evol.
, vol.37
, pp. 624-630
-
-
Chaw, S.-M.1
Long, H.2
Wang, B.-S.3
Zharkikh, A.4
Li, W.-H.5
-
14
-
-
0029057319
-
The phylogenetic positions of the conifer genera Amentotaxus, Phyllocladus, and Nageia inferred from 18S rRNA sequences
-
CHAW, S.-M., H.-M. SUNG, H. LONG, A. ZHARKIKH, and W.-H. LI. 1995. The phylogenetic positions of the conifer genera Amentotaxus, Phyllocladus, and Nageia inferred from 18S rRNA sequences. J. Mol. Evol. 41:224-230.
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 224-230
-
-
Chaw, S.-M.1
Sung, H.-M.2
Long, H.3
Zharkikh, A.4
Li, W.-H.5
-
15
-
-
0031012107
-
Molecular phylogeny of gymnosperms and seed plant evolution: Analysis of 18S rRNA sequences
-
CHAW, S.-M., A. ZHARKIKH, H.-M. SUNG, T.-C. LAU, and W.-H. LI. 1997. Molecular phylogeny of gymnosperms and seed plant evolution: analysis of 18S rRNA sequences. Mol. Biol. Evol. 14:56-68.
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 56-68
-
-
Chaw, S.-M.1
Zharkikh, A.2
Sung, H.-M.3
Lau, T.-C.4
Li, W.-H.5
-
16
-
-
0000863074
-
Phylogenetic analysis of seed plants and the origin of the angiosperms
-
CRANE, P. R. 1985. Phylogenetic analysis of seed plants and the origin of the angiosperms. Ann. Mo. Bot. Gard. 72:716-793.
-
(1985)
Ann. Mo. Bot. Gard.
, vol.72
, pp. 716-793
-
-
Crane, P.R.1
-
17
-
-
0032573568
-
The abominable mystery
-
CREPET, W. L. 1998. The abominable mystery. Science 282: 1653-1654.
-
(1998)
Science
, vol.282
, pp. 1653-1654
-
-
Crepet, W.L.1
-
18
-
-
0030431040
-
Seed plant phylogeny and the relationships of Gnetales
-
DOYLE, J. A. 1996. Seed plant phylogeny and the relationships of Gnetales. Int. J. Plant Svi. 157:S3-S39.
-
(1996)
Int. J. Plant Svi.
, vol.157
-
-
Doyle, J.A.1
-
19
-
-
0032087222
-
Molecules, morphology, fossils, and the relationship of angiosperms and Gnetales
-
_. 1998a. Molecules, morphology, fossils, and the relationship of angiosperms and Gnetales. Mol. Phylogenet. Evol. 9:448-462.
-
(1998)
Mol. Phylogenet. Evol.
, vol.9
, pp. 448-462
-
-
-
20
-
-
0032411093
-
Phylogeny of vascular plants
-
_. 1998b. Phylogeny of vascular plants. Annu. Rev. Ecol. Syst. 29:567-569.
-
(1998)
Annu. Rev. Ecol. Syst.
, vol.29
, pp. 567-569
-
-
-
21
-
-
0001234321
-
Seed plant phylogeny and the origin of the angiosperms: An experimental cladistic approach
-
DOYLE, J. A., and M. J. DONOGHUE. 1986. Seed plant phylogeny and the origin of the angiosperms: an experimental cladistic approach. Bot. Rev. 52:321-431.
-
(1986)
Bot. Rev.
, vol.52
, pp. 321-431
-
-
Doyle, J.A.1
Donoghue, M.J.2
-
22
-
-
0028080696
-
Integration of morphological and ribosomal RNA data on the origin of the angiosperms
-
DOYLE, J. A., M. J. DONOGHUE, and E. A. ZIMMER. 1994. Integration of morphological and ribosomal RNA data on the origin of the angiosperms. Ann. Mo. Bot. Gard. 81:419-450.
-
(1994)
Ann. Mo. Bot. Gard.
, vol.81
, pp. 419-450
-
-
Doyle, J.A.1
Donoghue, M.J.2
Zimmer, E.A.3
-
23
-
-
0033301420
-
Phylogenetic relationships of land plants using mitochondrial small-subunit rDNA sequences
-
DUFF, R. J., and D. L. NICKRENT. 1999. Phylogenetic relationships of land plants using mitochondrial small-subunit rDNA sequences. Am. J. Bot. 86:372-386.
-
(1999)
Am. J. Bot.
, vol.86
, pp. 372-386
-
-
Duff, R.J.1
Nickrent, D.L.2
-
24
-
-
0028886802
-
Biodiversity at the molecular level: The domains, kingdoms and phyla of life
-
EMBLEY, T M., R. P. HIRT, and D. M. WILLIAMS. 1994. Biodiversity at the molecular level: the domains, kingdoms and phyla of life. Philos. Trans. Soc Lond. B Biol. Sci. 345: 21-31.
-
(1994)
Philos. Trans. Soc Lond. B Biol. Sci.
, vol.345
, pp. 21-31
-
-
Embley, T.M.1
Hirt, R.P.2
Williams, D.M.3
-
25
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
FELSENSTEIN, J. 1978. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27: 401-410.
-
(1978)
Syst. Zool.
, vol.27
, pp. 401-410
-
-
Felsenstein, J.1
-
26
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
_. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
-
27
-
-
85130124588
-
Bryophyte phylogeny and the evolution of land plants: Evidence from development and ultrastucture
-
J. W. BATES, N. W. ASHTON, and J. G. DUCKETT, eds. Maney and the British Bryological Society, Leeds, England
-
GARBARY, D. J., and K. S. RENZAGLIA. 1998. Bryophyte phylogeny and the evolution of land plants: evidence from development and ultrastucture. Pp. 45-63 in J. W. BATES, N. W. ASHTON, and J. G. DUCKETT, eds. Bryology for the twenty-first century. Maney and the British Bryological Society, Leeds, England.
-
(1998)
Bryology for the Twenty-first Century
, pp. 45-63
-
-
Garbary, D.J.1
Renzaglia, K.S.2
-
28
-
-
0030052344
-
Noncoding sequences from the slowly evolving chloroplast inverted repeat in addition to rbcL data do not support Gnetalean affinities of angiosperms
-
GOREMYKIN, V., V. BOBROVA, J. PAHNKE, A. TROITSKY, A. ANTONOV, and W. MARTIN. 1996. Noncoding sequences from the slowly evolving chloroplast inverted repeat in addition to rbcL data do not support Gnetalean affinities of angiosperms. Mol. Biol. Evol. 13:383-396.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 383-396
-
-
Goremykin, V.1
Bobrova, V.2
Pahnke, J.3
Troitsky, A.4
Antonov, A.5
Martin, W.6
-
29
-
-
0029068893
-
Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites
-
GU, X., Y.-X. FU, and W. H. LI. 1995. Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites. Mol. Biol. Evol. 12:546-557.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 546-557
-
-
Gu, X.1
Fu, Y.-X.2
Li, W.H.3
-
30
-
-
0027236838
-
Comparative studies of RNA: Inferring higher-order structure from patterns of sequence variation
-
GUTELL, R. R. 1993. Comparative studies of RNA: inferring higher-order structure from patterns of sequence variation. Curr. Opin. Struct. Biol. 3:313-322.
-
(1993)
Curr. Opin. Struct. Biol.
, vol.3
, pp. 313-322
-
-
Gutell, R.R.1
-
31
-
-
0027427586
-
Phylogenetic relationships of ferns deduced from rbcL gene sequence
-
HASEBE, M., M. ITO, R. KOFUJI, K. UEDA, and K. IWATSUKI. 1993. Phylogenetic relationships of ferns deduced from rbcL gene sequence. J. Mol. Evol. 37:476-482.
-
(1993)
J. Mol. Evol.
, vol.37
, pp. 476-482
-
-
Hasebe, M.1
Ito, M.2
Kofuji, R.3
Ueda, K.4
Iwatsuki, K.5
-
32
-
-
0001164724
-
Fern phylogeny based on rbcL nucleotide sequences
-
HASEBE, M., P. G. WOLF, K. M. PRYER et al. (13 co-authors). 1995. Fern phylogeny based on rbcL nucleotide sequences. Am. Fern J. 85:134-181.
-
(1995)
Am. Fern J.
, vol.85
, pp. 134-181
-
-
Hasebe, M.1
Wolf, P.G.2
Pryer, K.M.3
-
33
-
-
0022376704
-
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
-
HASEGAWA, M., H. KISHINO, and T. YANO. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:32-38.
-
(1985)
J. Mol. Evol.
, vol.22
, pp. 32-38
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
34
-
-
85130108447
-
Bryophytes and the origins and diversification of land plants: New evidence from molecules
-
J. W. BATES, N. W. ASHTON, and J. G. DUCKETT, eds. Maney and the British Bryological Society, Leeds, England
-
HEDDERSON, T. A., R. CHAPMAN, and C. J. Cox. 1998. Bryophytes and the origins and diversification of land plants: new evidence from molecules. Pp. 65-77 in J. W. BATES, N. W. ASHTON, and J. G. DUCKETT, eds. Bryology for the twenty-first century. Maney and the British Bryological Society, Leeds, England.
-
(1998)
Bryology for the Twenty-first Century
, pp. 65-77
-
-
Hedderson, T.A.1
Chapman, R.2
Cox, C.J.3
-
35
-
-
0000236958
-
Phylogenetic relationships of bryophytes inferred from nuclear-encoded rRNA gene sequences
-
HEDDERSON, T. A., R. L. CHAPMAN, and W. L. ROUTES. 1996. Phylogenetic relationships of bryophytes inferred from nuclear-encoded rRNA gene sequences. Plant Syst. Evol. 200: 213-224.
-
(1996)
Plant Syst. Evol.
, vol.200
, pp. 213-224
-
-
Hedderson, T.A.1
Chapman, R.L.2
Routes, W.L.3
-
36
-
-
0001164992
-
Charophyte evolution and the origin of land plants
-
HUSS, V. A. R., and H. D. KRANZ. 1997. Charophyte evolution and the origin of land plants. Plant Syst. Evol. 11(Suppl.): 103-114.
-
(1997)
Plant Syst. Evol.
, vol.11
, Issue.SUPPL.
, pp. 103-114
-
-
Huss, V.A.R.1
Kranz, H.D.2
-
37
-
-
0032420129
-
Simultaneous parsimony jackknife analysis of 2538 rbcL DNA sequences reveals support for major clades of green plants, land plants, seed plants and flowering plants
-
KÄLLERSJÖ, M., J. S. FARRIS, M. W. CHASE, B. BREMER, M. F. FAY, C. J. HUMPHRIES, G. PETERSEN, O. SEBERG, and K. BREMER. 1998. Simultaneous parsimony jackknife analysis of 2538 rbcL DNA sequences reveals support for major clades of green plants, land plants, seed plants and flowering plants. Plant Syst. Evol. 213:259-287.
-
(1998)
Plant Syst. Evol.
, vol.213
, pp. 259-287
-
-
Källersjö, M.1
Farris, J.S.2
Chase, M.W.3
Bremer, B.4
Fay, M.F.5
Humphries, C.J.6
Petersen, G.7
Seberg, O.8
Bremer, K.9
-
39
-
-
0030885968
-
The origin and early evolution of plants on land
-
_. 1997b. The origin and early evolution of plants on land. Nature 389:33-39.
-
(1997)
Nature
, vol.389
, pp. 33-39
-
-
-
40
-
-
0024307824
-
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order of the Hominoidea
-
KISHINO, H., and M. HASEGAWA. 1989. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order of the Hominoidea. J. Mol. Evol. 29:170-179.
-
(1989)
J. Mol. Evol.
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
41
-
-
0029826327
-
Molecular evolution of pteridophytes and their relationship to seed plants: Evidence from complete 18S rRNA gene sequences
-
KRANZ, H. D., and V. A. R. HUSS. 1996. Molecular evolution of pteridophytes and their relationship to seed plants: evidence from complete 18S rRNA gene sequences. Plant Syst. Evol. 202:1-11.
-
(1996)
Plant Syst. Evol.
, vol.202
, pp. 1-11
-
-
Kranz, H.D.1
Huss, V.A.R.2
-
42
-
-
0029024999
-
The origin of land plants: Phylogenetic relationships between Charophytes, Bryophytes, and vascular plants inferred from complete small subunit ribosomal RNA gene sequences
-
KRANZ, H. D., D. MIKS, M.-L. SIEGLER, I. CAPESIUS, C. W. SENSEN, and V. A. HUSS. 1995. The origin of land plants: phylogenetic relationships between Charophytes, Bryophytes, and vascular plants inferred from complete small subunit ribosomal RNA gene sequences. J. Mol. Evol. 41: 74-84.
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 74-84
-
-
Kranz, H.D.1
Miks, D.2
Siegler, M.-L.3
Capesius, I.4
Sensen, C.W.5
Huss, V.A.6
-
43
-
-
0031156914
-
Phylogenetic relationships of the liverworts (Hepaticae), a basal embryophyte lineage, inferred from nucleotide sequence data of the chloroplast gene rbcL
-
LEWIS, L. A., B. D. MISHLER, and R. VILGALYS. 1997. Phylogenetic relationships of the liverworts (Hepaticae), a basal embryophyte lineage, inferred from nucleotide sequence data of the chloroplast gene rbcL. Mol. Phylogenet. Evol. 7:377-393.
-
(1997)
Mol. Phylogenet. Evol.
, vol.7
, pp. 377-393
-
-
Lewis, L.A.1
Mishler, B.D.2
Vilgalys, R.3
-
44
-
-
0029935637
-
Evolution of chlorophyll and bacteriochlorophyll: The problem of invariant sites in sequence analysis
-
LOCKHART, P. J., A. W. D. LARKUM, M. A. STEEL, P. J. WADDELL, and D. PENNY. 1996. Evolution of chlorophyll and bacteriochlorophyll: the problem of invariant sites in sequence analysis. Proc. Natl. Acad. Sci. USA 93:1930-1934.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 1930-1934
-
-
Lockhart, P.J.1
Larkum, A.W.D.2
Steel, M.A.3
Waddell, P.J.4
Penny, D.5
-
45
-
-
0028361182
-
Recovering evolutionary trees under a more realistic model of sequence evolution
-
LOCKHART, P. J., M. A. STEEL, M. D. HENDY, and D. PENNY. 1994. Recovering evolutionary trees under a more realistic model of sequence evolution. Mol. Biol. Evol. 11:605-612.
-
(1994)
Mol. Biol. Evol.
, vol.11
, pp. 605-612
-
-
Lockhart, P.J.1
Steel, M.A.2
Hendy, M.D.3
Penny, D.4
-
46
-
-
84960569058
-
Discovery and importance of multiple islands of most-parsimonious trees
-
MADDISON, D. R. 1991. Discovery and importance of multiple islands of most-parsimonious trees. Syst. Zool. 40:315-328.
-
(1991)
Syst. Zool.
, vol.40
, pp. 315-328
-
-
Maddison, D.R.1
-
48
-
-
0028456067
-
Phylogenetic analysis of green plant rbcL sequences
-
MANHART, J. R. 1994. Phylogenetic analysis of green plant rbcL sequences. Mol. Phylogenet. Evol. 3:114-127.
-
(1994)
Mol. Phylogenet. Evol.
, vol.3
, pp. 114-127
-
-
Manhart, J.R.1
-
49
-
-
0001053254
-
Chloroplast 16S rDNA sequences and phylogenetic relationships of ferns and fern allies
-
_. 1995. Chloroplast 16S rDNA sequences and phylogenetic relationships of ferns and fern allies. Am. Fern J. 85:182-192.
-
(1995)
Am. Fern J.
, vol.85
, pp. 182-192
-
-
-
50
-
-
0002980248
-
Classification of the green algae: A concept based on comparative cytology
-
D. E. G. IRVINE and D. M. JOHN, eds. Academic Press, London
-
MATTOX, K. R., and K. D. STEWART. 1984. Classification of the green algae: a concept based on comparative cytology. Pp. 29-72 in D. E. G. IRVINE and D. M. JOHN, eds. Systematics of the green algae. Academic Press, London.
-
(1984)
Systematics of the Green Algae
, pp. 29-72
-
-
Mattox, K.R.1
Stewart, K.D.2
-
51
-
-
84974971942
-
A Hennigian approach to bryophyte phylogeny
-
MISHLER, B. D. 1986. A Hennigian approach to bryophyte phylogeny. J. Bryology 14:71-81.
-
(1986)
J. Bryology
, vol.14
, pp. 71-81
-
-
Mishler, B.D.1
-
52
-
-
0028281907
-
Cladistic analysis of molecular and morphological data
-
MISHLER, B. D. 1994. Cladistic analysis of molecular and morphological data. Am. J. Phys. Anthropol. 94:143-156.
-
(1994)
Am. J. Phys. Anthropol.
, vol.94
, pp. 143-156
-
-
Mishler, B.D.1
-
53
-
-
84989431548
-
Transition to a land flora: Phylogenetic relationships of the green algae and bryophytes
-
MISHLER, B. D., and S. P. CHURCHILL. 1985. Transition to a land flora: phylogenetic relationships of the green algae and bryophytes. Cladistics 1:305-328.
-
(1985)
Cladistics
, vol.1
, pp. 305-328
-
-
Mishler, B.D.1
Churchill, S.P.2
-
54
-
-
0000490136
-
Phylogenetic relationships of the "green algae" and "bryophytes"
-
MISHLER, B. D., L. A. LEWIS, M. A. BUCHHEIM, K. S. RENZAGLIA, D. J. GARBARY, C. F. DELWICHE, F. W. ZECHMAN, T. S. KANTZ, and R. L. CHAPMAN. 1994. Phylogenetic relationships of the "green algae" and "bryophytes". Ann. Mo. Bot. Gard. 81:451-483.
-
(1994)
Ann. Mo. Bot. Gard.
, vol.81
, pp. 451-483
-
-
Mishler, B.D.1
Lewis, L.A.2
Buchheim, M.A.3
Renzaglia, K.S.4
Garbary, D.J.5
Delwiche, C.F.6
Zechman, F.W.7
Kantz, T.S.8
Chapman, R.L.9
-
55
-
-
0345684046
-
Compartmentalization in phylogeny reconstruction: Philosophy and practice
-
Princeton, N.J.
-
MISHLER, B. D., P. S. SOLTIS, and D. E. SOLTIS. 1998. Compartmentalization in phylogeny reconstruction: philosophy and practice. DIMACS Report, Princeton, N.J.
-
(1998)
DIMACS Report
-
-
Mishler, B.D.1
Soltis, P.S.2
Soltis, D.E.3
-
56
-
-
0001210124
-
A molecular approach to the phylogeny of bryophytes: Cladistic analysis of chloroplast-encoded 16S and 23S ribosomal RNA genes
-
MISHLER, B. D., P. H. THRALL, J. S. HOPPLE JR., E. DE LUNA, and R. VILGALYS. 1992. A molecular approach to the phylogeny of bryophytes: cladistic analysis of chloroplast-encoded 16S and 23S ribosomal RNA genes. Bryologist 95: 172-180.
-
(1992)
Bryologist
, vol.95
, pp. 172-180
-
-
Mishler, B.D.1
Thrall, P.H.2
Hopple J.S., Jr.3
De Luna, E.4
Vilgalys, R.5
-
57
-
-
0034350373
-
An empirical test of three methods for estimating internal support on phylogenetic trees
-
in press
-
MORT, M. E., P. S. SOLTIS, D. E. SOLTIS, and M. L. MABRY. 2000. An empirical test of three methods for estimating internal support on phylogenetic trees. Syst. Biol. (in press).
-
(2000)
Syst. Biol.
-
-
Mort, M.E.1
Soltis, P.S.2
Soltis, D.E.3
Mabry, M.L.4
-
58
-
-
0000348343
-
A comparison of angiosperm phylogenies from nuclear 18S rDNA and rbcL sequences
-
NICKRENT, D. L., and D. E. SOLTIS. 1995. A comparison of angiosperm phylogenies from nuclear 18S rDNA and rbcL sequences. Ann. Mo. Bot. Gard. 82:208-234.
-
(1995)
Ann. Mo. Bot. Gard.
, vol.82
, pp. 208-234
-
-
Nickrent, D.L.1
Soltis, D.E.2
-
59
-
-
0023498406
-
Earliest phylogenetic branchings: Comparing rRNA-based evolutionary trees inferred with various techniques
-
OLSEN, G. J. 1987. Earliest phylogenetic branchings: Comparing rRNA-based evolutionary trees inferred with various techniques. Cold Spring Harb. Symp. Quant. Biol. 52:825-837.
-
(1987)
Cold Spring Harb. Symp. Quant. Biol.
, vol.52
, pp. 825-837
-
-
Olsen, G.J.1
-
60
-
-
0029814658
-
Lessons from an archael genome: What are we learning from Methanococcus jannaschii?
-
OLSEN, G. J., and C. R. WOESE. 1996. Lessons from an archael genome: what are we learning from Methanococcus jannaschii? Trends Genet. 12:377-379.
-
(1996)
Trends Genet.
, vol.12
, pp. 377-379
-
-
Olsen, G.J.1
Woese, C.R.2
-
61
-
-
0030982247
-
A molecular view of microbial diversity and the biosphere
-
PACE, N. R. 1997. A molecular view of microbial diversity and the biosphere. Science 276:734-740.
-
(1997)
Science
, vol.276
, pp. 734-740
-
-
Pace, N.R.1
-
62
-
-
0001769167
-
Utility of rDNA internal transcribed spacer sequences from the inverted repeat of chloroplast DNA in pteridophyte molecular phylogenetics
-
J. M. CAMUS, M. GIBBY, and R. J. JOHNS, eds. Royal Botanic Garden, Kew, England
-
PAHNKE, J., V. GOREMYKIN, V. BOBROVA, A. TROITSKY, A. ANTONOV, and W. MARTIN. 1996. Utility of rDNA internal transcribed spacer sequences from the inverted repeat of chloroplast DNA in pteridophyte molecular phylogenetics. Pp. 217-230 in J. M. CAMUS, M. GIBBY, and R. J. JOHNS, eds. Pteridology in perspective. Royal Botanic Garden, Kew, England.
-
(1996)
Pteridology in Perspective
, pp. 217-230
-
-
Pahnke, J.1
Goremykin, V.2
Bobrova, V.3
Troitsky, A.4
Antonov, A.5
Martin, W.6
-
63
-
-
0001368574
-
Phylogenetic relationships of extant ferns based on evidence from morphology and rbcL sequences
-
PRYER, K. M., A. R. SMITH, and J. E. SKOG. 1995. Phylogenetic relationships of extant ferns based on evidence from morphology and rbcL sequences. Am. Fern J. 85:205-282.
-
(1995)
Am. Fern J.
, vol.85
, pp. 205-282
-
-
Pryer, K.M.1
Smith, A.R.2
Skog, J.E.3
-
64
-
-
0032514486
-
The gain of three mitochondrial introns identifies liverworts as the earliest land plants
-
QIU, Y.-L., Y. CHO, J. C. COX, and J. D. PALMER. 1998. The gain of three mitochondrial introns identifies liverworts as the earliest land plants. Nature 394:671-674.
-
(1998)
Nature
, vol.394
, pp. 671-674
-
-
Qiu, Y.-L.1
Cho, Y.2
Cox, J.C.3
Palmer, J.D.4
-
65
-
-
0028039546
-
18S ribosomal DNa sequences indicate a monophyletic origin of Charophyceae
-
RAGAN, M. A., T. J. PARSONS, T. SAWA, and N. A. STRAUSS. 1994. 18S ribosomal DNA sequences indicate a monophyletic origin of Charophyceae. J. Phycol. 30:490-500.
-
(1994)
J. Phycol.
, vol.30
, pp. 490-500
-
-
Ragan, M.A.1
Parsons, T.J.2
Sawa, T.3
Strauss, N.A.4
-
66
-
-
0026598577
-
Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants
-
RAUBESON, L. A., and R. K. JANSEN. 1992. Chloroplast DNA evidence on the ancient evolutionary split in vascular land plants. Science 255:1697-1699.
-
(1992)
Science
, vol.255
, pp. 1697-1699
-
-
Raubeson, L.A.1
Jansen, R.K.2
-
67
-
-
0030825602
-
Phylogenetic relationships among Saxifragaceae sensu lato: A comparison of topologies based on 18S rDNa and rbcL sequences
-
SOLTIS, D. E., and P. S. SOLTIS. 1997. Phylogenetic relationships among Saxifragaceae sensu lato: a comparison of topologies based on 18S rDNA and rbcL sequences. Am. J. Bot. 84:504-522.
-
(1997)
Am. J. Bot.
, vol.84
, pp. 504-522
-
-
Soltis, D.E.1
Soltis, P.S.2
-
68
-
-
0033838109
-
Angiosperm phylogeny inferred from a combined data set of 18S rDNA, rbcL, and atpB sequences
-
in press
-
SOLTIS, D. E., P. S. SOLTIS, M. W. CHASE et al. (13 co-authors). 2000. Angiosperm phylogeny inferred from a combined data set of 18S rDNA, rbcL, and atpB sequences. Bot. J. Linn. Soc. (in press).
-
(2000)
Bot. J. Linn. Soc.
-
-
Soltis, D.E.1
Soltis, P.S.2
Chase, M.W.3
-
69
-
-
0032025585
-
Inferring complex phylogenies using parsimony: An empirical approach using three large DNA data sets for angiosperms
-
SOLTIS, D. E., P. S. SOLTIS, M. E. MORT, M. W. CHASE, V. SAVOLAINEN, S. B. HOOT, and C. M. MORTON. 1998. Inferring complex phylogenies using parsimony: an empirical approach using three large DNA data sets for angiosperms. Syst. Biol. 47:32-42.
-
(1998)
Syst. Biol.
, vol.47
, pp. 32-42
-
-
Soltis, D.E.1
Soltis, P.S.2
Mort, M.E.3
Chase, M.W.4
Savolainen, V.5
Hoot, S.B.6
Morton, C.M.7
-
70
-
-
0031462501
-
Angiosperm phylogeny inferred from 18S ribosomal DNA sequences
-
SOLTIS, D. E., P. S. SOLTIS, D. L. NICKRENT et al. (16 co-authors). 1997. Angiosperm phylogeny inferred from 18S ribosomal DNA sequences. Ann. Mo. Bot. Gard. 84:1-49.
-
(1997)
Ann. Mo. Bot. Gard.
, vol.84
, pp. 1-49
-
-
Soltis, D.E.1
Soltis, P.S.2
Nickrent, D.L.3
-
71
-
-
0002687565
-
Molecular evolution of 18S rDNA in angiosperms: Implications for character weighting in phylogenetic analysis
-
D. E. SOLTIS, P. S. SOLTIS, and J. J. DOYLE, eds. Kluwer Academic Publishers, Boston
-
SOLTIS, P. S., and D. E. SOLTIS. 1998. Molecular evolution of 18S rDNA in angiosperms: implications for character weighting in phylogenetic analysis. Pp. 188-210 in D. E. SOLTIS, P. S. SOLTIS, and J. J. DOYLE, eds. Molecular systematics of plants II. Kluwer Academic Publishers, Boston.
-
(1998)
Molecular Systematics of Plants II
, pp. 188-210
-
-
Soltis, P.S.1
Soltis, D.E.2
-
72
-
-
0028807391
-
Among-site rate variation and phylogenetic analysis of 12S rRNA in Sigmodontine rodents
-
SULLIVAN, J., K. E. HOLSINGER, and C. SIMON. 1995. Among-site rate variation and phylogenetic analysis of 12S rRNA in Sigmodontine rodents. Mol. Biol. Evol. 12:988-1001.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 988-1001
-
-
Sullivan, J.1
Holsinger, K.E.2
Simon, C.3
-
74
-
-
0001336205
-
Phylogenetic inference
-
D. M. HILLIS, C. MORITZ, and B. K. MABLE, eds. Sinauer, Sunderland, Mass
-
SWOFFORD, D. L., G. J. OLSEN, P. J. WADDELL, and D. M. HILLIS. 1996. Phylogenetic inference. Pp. 407-514 in D. M. HILLIS, C. MORITZ, and B. K. MABLE, eds. Molecular systematics. 2nd edition. Sinauer, Sunderland, Mass.
-
(1996)
Molecular Systematics. 2nd Edition
, pp. 407-514
-
-
Swofford, D.L.1
Olsen, G.J.2
Waddell, P.J.3
Hillis, D.M.4
-
76
-
-
0028205953
-
Relative efficiencies of the maximum likelihood, neighbor joining, and maximum parsimony methods when substitution rate varies with site
-
TATENO, Y., N. TAKEZAKI, and M. NEI. 1994. Relative efficiencies of the maximum likelihood, neighbor joining, and maximum parsimony methods when substitution rate varies with site. Mol. Biol. Evol. 11:261-277.
-
(1994)
Mol. Biol. Evol.
, vol.11
, pp. 261-277
-
-
Tateno, Y.1
Takezaki, N.2
Nei, M.3
-
77
-
-
0027309533
-
Rates and patterns of base change in the small subunit ribosomal RNA gene
-
VAWTER, L., and W. M. BROWN. 1993. Rates and patterns of base change in the small subunit ribosomal RNA gene. Genetics 134:597-608.
-
(1993)
Genetics
, vol.134
, pp. 597-608
-
-
Vawter, L.1
Brown, W.M.2
-
78
-
-
0002574561
-
Evolutionary trees of apes and humans from DNA sequences
-
A. J. LOCK and D. R. PETERS, eds. Clarendon Press, Oxford, England
-
WADDELL, P. J., and D. PENNY. 1996. Evolutionary trees of apes and humans from DNA sequences. Pp. 53-73 in A. J. LOCK and D. R. PETERS, eds. Handbook of symbolic evolution. Clarendon Press, Oxford, England.
-
(1996)
Handbook of Symbolic Evolution
, pp. 53-73
-
-
Waddell, P.J.1
Penny, D.2
-
79
-
-
0027241482
-
Monophyletic origins of the Metazoa: An evolutionary link with fungi
-
WAINRIGHT, P. O., O. HINKLE, M. L. SOGIN, and S. K. STICKEL. 1993. Monophyletic origins of the Metazoa: an evolutionary link with fungi. Science 260:340-342.
-
(1993)
Science
, vol.260
, pp. 340-342
-
-
Wainright, P.O.1
Hinkle, O.2
Sogin, M.L.3
Stickel, S.K.4
-
80
-
-
0001285044
-
Preliminary inferences of the phylogeny of bryophytes from nuclear-encoded ribosomal RNA sequences
-
WATERS, D. A., M. A. BUCHHEIM, R. A. DEWEY, and R. L. CHAPMAN. 1992. Preliminary inferences of the phylogeny of bryophytes from nuclear-encoded ribosomal RNA sequences. Am. J. Bot. 79:459-466.
-
(1992)
Am. J. Bot.
, vol.79
, pp. 459-466
-
-
Waters, D.A.1
Buchheim, M.A.2
Dewey, R.A.3
Chapman, R.L.4
-
81
-
-
0033595002
-
MADS-box genes reveal that gnetophytes are more closely related to conifers than to flowering plants
-
WINTER, K.-U., A. BECKER, T. MUNSTER, J. T. KIM, H. SAEDLER, and G. THIESSEN. 1999. MADS-box genes reveal that gnetophytes are more closely related to conifers than to flowering plants. Proc. Natl. Acad. Sci. USA 96:7342-7347.
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 7342-7347
-
-
Winter, K.-U.1
Becker, A.2
Munster, T.3
Kim, J.T.4
Saedler, H.5
Thiessen, G.6
-
82
-
-
0023184331
-
Bacterial evolution
-
WOESE, C. R. 1987. Bacterial evolution. Microbiol. Rev. 51: 221-271.
-
(1987)
Microbiol. Rev.
, vol.51
, pp. 221-271
-
-
Woese, C.R.1
-
83
-
-
0028387348
-
There must be a prokaryote somewhere: Microbiology's search for itself
-
_. 1994. There must be a prokaryote somewhere: microbiology's search for itself. Microbiol. Rev. 58:1-9.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 1-9
-
-
-
84
-
-
0032530772
-
Default taxonomy: Ernst Mayr's view of the microbial world
-
_. 1998. Default taxonomy: Ernst Mayr's view of the microbial world. Proc. Natl. Acad. Sci. USA 95:11043-11046.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 11043-11046
-
-
-
85
-
-
0001271789
-
Phylogenetic structure of the prokaryotic domain: The primary kingdoms
-
WOESE, C. R., and G. E. Fox. 1977. Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proc. Natl. Acad. Sci. USA 74:5088-5090.
-
(1977)
Proc. Natl. Acad. Sci. USA
, vol.74
, pp. 5088-5090
-
-
Woese, C.R.1
Fox, G.E.2
-
86
-
-
0025300402
-
Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya
-
WOESE, C. R., O. KANDLER, and M. L. WHEELIS. 1990. Towards a natural system of organisms: Proposal for the domains Archaea, Bacteria, and Eucarya. Proc. Natl. Acad. Sci. USA 87:4576-4579.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 4576-4579
-
-
Woese, C.R.1
Kandler, O.2
Wheelis, M.L.3
-
87
-
-
0001686181
-
Phylogenetic analyses of rbcL and nuclear ribosomal RNA gene sequences in Dennstaedtiaceae
-
WOLF, P. G. 1995. Phylogenetic analyses of rbcL and nuclear ribosomal RNA gene sequences in Dennstaedtiaceae. Am. Fern J. 85:306-327.
-
(1995)
Am. Fern J.
, vol.85
, pp. 306-327
-
-
Wolf, P.G.1
-
88
-
-
0030805226
-
Evaluation of atpB nucleotide sequences for phylogenetic studies of ferns and other pteridophytes
-
_. 1997. Evaluation of atpB nucleotide sequences for phylogenetic studies of ferns and other pteridophytes. Am. J. Bot. 84:1429-1440.
-
(1997)
Am. J. Bot.
, vol.84
, pp. 1429-1440
-
-
-
89
-
-
0002993358
-
Phylogenetic studies of extant pteridophytes
-
D. E. SOLTIS, P S. SOLTIS, and J. J. DOYLE, eds. Kluwer Academic Publishers, Boston
-
WOLF, P. G., K. M. PRYER, A. R. SMITH, and M. HASEBE. 1998. Phylogenetic studies of extant pteridophytes. Pp. 541-556 in D. E. SOLTIS, P S. SOLTIS, and J. J. DOYLE, eds. Molecular systematics of plants II. Kluwer Academic Publishers, Boston.
-
(1998)
Molecular Systematics of Plants II
, pp. 541-556
-
-
Wolf, P.G.1
Pryer, K.M.2
Smith, A.R.3
Hasebe, M.4
-
90
-
-
0028064845
-
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
-
YANG, Z. 1994. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Mol. Evol. 39:306-314.
-
(1994)
J. Mol. Evol.
, vol.39
, pp. 306-314
-
-
Yang, Z.1
|