Ecophysiological variabilities in ectohydrolytic enzyme activities of some Pseudoalteromonas species, P. citrea, P. issachenkonii, and P. nigrifaciens

Current Microbiology

Volumn 46, Issue 1, 2003, Pages 6-10

  Ivanova, Elena P ^a,b   Bakunina, I Yu ^a   Nedashkovskaya, Oiga I ^a   Gorshkova, Nataliya M ^a   Alexeeva, Yulia V ^a   Zelepuga, Elena A ^a   Zvaygintseva, T N ^a   Nicolau, Dan V ^b   Mikhailov, V V ^a  

^a INSTITUTE OF BIOLOGY AND SOIL SCIENCE   (Russian Federation)

^b SWINBURNE UNIVERSITY OF TECHNOLOGY   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

AGARASE; ALGINASE; ALPHA GALACTOSIDASE; ALPHA MANNOSIDASE; AMYLASE; BETA GALACTOSIDASE; BETA GLUCOSIDASE; BIOPOLYMER; CELLULASE; CHITINASE; ENDO 1,3 BETA GLUCANASE; ENZYME; FUCOIDAN HYDROLASE; GLUCOSAMINIDASE; MONOPHENOL MONOOXYGENASE; N ACETYL BETA GLUCOSAMINIDASE; PROTEINASE; PUSTULANASE; TRIACYLGLYCEROL LIPASE; UNCLASSIFIED DRUG; XYLAN 1,4 BETA XYLOSIDASE;

ALGA; ARTICLE; BACTERIUM ISOLATION; ECOLOGY; ECOPHYSIOLOGY; ENZYME ACTIVITY; HYDROLYSIS; INVERTEBRATE; NONHUMAN; PRIORITY JOURNAL; PSEUDOALTEROMONAS; PSEUDOALTEROMONAS CITREA; PSEUDOALTEROMONAS ISSACHENKONII; PSEUDOALTEROMONAS NIGRIFACIENS; SEAGRASS; STRAIN DIFFERENCE;

CULTURE MEDIA; ECOSYSTEM; HYDROLASES; PSEUDOALTEROMONAS; SEAWATER;

ALGAE; BACTERIA (MICROORGANISMS); HALOPHILA; INVERTEBRATA; NEGIBACTERIA; PSEUDOALTEROMONAS; PSEUDOALTEROMONAS CITREA; PSEUDOALTEROMONAS ISSACHENKONII; PSEUDOALTEROMONAS NIGRIFACIENS;

EID: 0042706397     PISSN: 03438651     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00284-002-3794-6     Document Type: Article

References (27)

1. Austin B (1989) Novel pharmaceutical compounds from marine bacteria. J Appl Bacteriol 67:461-470
2. Azam F, Cho BC (1987) Bacterial utilization of organic matter in the sea. In: Ecology of microbial communities. Cambridge: Cambridge University Press, pp 261-281
3. Bakunina IY, Shevchenko LS, Nedashkovskaya OI, Shevchenko NM, Alexeeva SA, Mikhailov VV, Zvyagintseva TN (2000) Search for fucoidan hydrolases among marine microorganisms Microbiologiya (Translation from Russian) 69:370-376
4. Baumann P, Baumann L (1981) The marine Gram-negative eubacteria: genera Photobacterium, Beneckea, Alteromonas, Pseudomonas, and Alcaligenes. In: Starr MP, Stolp H, Trüper HG, Balows A, Schlegel HG (eds) The prokaryotes: A handbook on habitats, isolation, and identification of bacteria. Berlin. Springer-Verlag, pp. 1302-1330
5. Bowman J, McCammon SA, Brown MV, Nichols DS, McMeekin TA (1997) Diversity and association of psychrophilic bacteria in Antarctic Sea ice. Appl Environ Microbiol 63:3068-3078
6. Darwin C (1859) The origin of species. London: Murray
7. Fuhrmann JA, McCallum K, Davis AA (1993) Phylogenetic diversity of subsurface marine microbial communities from the Atlantic and Pacific oceans. Appl Environ Microbiol 59:1294-1302
8. Gauthier G, Gauthier M, Christen R (1995) Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (Emended) and Pseudoalteromonas gen. nov., and twelve new species combinations. Int J Syst Bacteriol 45:755-761
9. Holmström C, Kjelleberg S (1999) Marine Pseudoalteromonas species are associated with higher organisms and produce biologically active extracellular agents. FEMS Microbiol Ecol 30:285-293
10. Hoppe HG, Kim SJ, Gocke K (1988) Microbial decomposition in aquatic environments: combined process of extracellular enzyme activity and substrate uptake. Appl Environ Microbiol 54:784-790
11. Hrmova M, Fincher GB (2001) Structure-function relationships of beta-D-glucan endo- and exohydrolases from higher plants. Plant Mol Biol 47:73-91
12. Ivanova EP, Kiprianova EA, Mikhailov VV, Levanova GF, Garagulya AG, Gorshkova NM, Yumoto N, Yoshikawa S (1996) Characterization and identification of marine Alteromonas nigrifaciens strains and emendation of the description. Int J Syst Bacteriol 46:223-228
13. Ivanova EP, Kiprianova EA, Mikhailov VV, Levanova GF, Garagulya AD, Gorshkova NM, Vysotskii MV, Nicolau DV, Yumoto Y, Yoshikawa S (1998) Phenotypic diversity of Pseudoalteromonas citrea from different marine habitats and emendation of the description. Int J Syst Bacteriol 48:247-256
14. Ivanova EP, Bakunina IY, Sawabe T, Hayashi K, Alexeeva YV, Zhukova NV, Nicolau DV, Zvaygintseva TN, Mikhailov VV (2002a) Two species of culturable bacteria associated with degradation of brown algae Fucus evanescens. Microb Ecol 43:242-249
15. Ivanova EP, Sawabe T, Alexeeva YV, Lysenko AM, Gorshkova NM, Hayashi K, Zukova NV, Christen R, Mikhailov VV (2002b) Pseudoalteromonas issachenkonii sp. nov., a bacterium that degrades the thallus of brown alga Fucus evanescen. Int J Syst Evol Microbiol 52:229-232
16. Lowry OH, Rosebrough NJ, Farr AL, Randall RJ (1951) Protein measurement with the Folin phenol reagent. J Biol Chem 193:265-275
17. Martinez J, Smith DC, Steward GF, Azam F (1996) Variability in ectohydrolytic enzyme activities of pelagic marine bacteria and its significance for substrate processing in the sea. Aquat Microb Ecol 10:223-230
18. Nagata T, Kirchman DL (1992) Release of macromolecular organic complexes by heterotrophic marine flagellates. Mar Ecol Prog Ser 83:233-240
19. Nelson TE (1944) A photometric adaptation of the Somogyi method for the determination of glucose. J Biol Chem 153:375-381
20. Pomerentz SH, Murphy VV (1974) Purification and properties of tyrosinases from Vibrio tyrosinaticus. Arch Biochem Biophys 160:73-82
21. Rath J, Schiller C, Herndl GL (1993) Ectoenzymatic activity and bacterial dynamics along a trophic gradient in the Caribbean Sea. Mar Ecol Prog Ser 102:89-96
22. Rehnstam AS, Backman S, Smith DC, Azam F, Hagstrom A (1993) Blooms of sequence-specific culturable bacteria in the sea. FEMS Microb Ecol 102:161-166
23. Smibert RM, Krieg NR (1994) Phenotypic characterization. In: Gerhardt F (ed) Methods for general and molecular bacteriology. Washington, D.C.: American Society for Microbiology, pp 607-654
24. Smith DC, Simon M, Alldredge AL, Azam F (1992) Intense hydrolytic enzyme activity on marine aggregates and implications for rapid particle dissolution. Nature 359:139-142
25. Warren J (1996) Microbial hydrolysis of polysaccharides. Annu Rev Microbiol 50:83-212
26. Zvyagintseva TN, Shirokova NM, Elyakova LA (1994) The structure of laminarans from brown seaweeds. Bioorg Khim 20:349-358
27. Zvyagintseva TN, Shevchenko NM, Popivnich IB, Isakov VV, Scobun AS, Sundukova EV, Elyakova LA (1999) A new procedure for the separation of the water-soluble polysaccharides from brown seaweeds. Carbohyd Res 322:32-39