Phenotypic diversity of Pseudoalteromonas citrea from different marine habitats and emendation of the description

International Journal of Systematic Bacteriology

Volumn 48, Issue 1, 1998, Pages 247-256

  Ivanova, Elena P ^a,d   Kiprianova, Elena A ^b   Mikhailov, Valery V ^a   Levanova, Galina F ^c   Garagulya, Alexandra D ^b   Gorshkova, Nataliya M ^a   Vysotskii, Mikhail V ^e   Nicolau, Dan V ^d   Yumoto, Noboru ^d   Taguchi, Takahisa ^d   Yoshikawa, Susumu ^d  

^a PACIFIC INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

^b ZABOLOTNY INSTITUTE OF MICROBIOLOGY AND VIROLOGY   (Ukraine)

^c Institute of Epidemiology and Microbiology   (Russian Federation)

^d NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^e INSTITUTE OF MARINE BIOLOGY   (Russian Federation)

Author keywords

Marine bacteria; Pseudoalteromonas citrea

Indexed keywords

AGAR; ALPHA GALACTOSIDASE; BACTERIAL DNA; CYTOSINE; ENDO 1,3 BETA GLUCANASE; GUANINE; MEMBRANE ANTIGEN; POLYCLONAL ANTIBODY;

AEROBIC BACTERIUM; ARTICLE; BACTERIUM IDENTIFICATION; CONTROLLED STUDY; DNA DNA HYBRIDIZATION; MARINE ENVIRONMENT; MUSSEL; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; PSEUDOALTEROMONAS CITREA; STRAIN DIFFERENCE;

ALTEROMONAS ATLANTICA; ALTEROMONAS MACLEODII; BACTERIA (MICROORGANISMS); CRENOMYTILUS GRAYANUS; MIZUHOPECTEN YESSOENSIS; PATINOPECTEN; PATINOPECTEN YESSOENSIS; PSEUDOALTEROMONAS ATLANTICA; PSEUDOALTEROMONAS CARRAGEENOVORA; PSEUDOALTEROMONAS CITREA; PSEUDOALTEROMONAS ELYAKOVII; PSEUDOALTEROMONAS FULIGINEA; PSEUDOALTEROMONAS HALOPLANKTIS; PSEUDOALTEROMONAS NIGRIFACIENS; PSEUDOALTEROMONAS TETRAODONIS; PSEUDOALTEROMONAS UNDINA; UNDINA;

EID: 0031917471     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-48-1-247     Document Type: Article

References (43)

1. Akagawa-Matsushita, M., Matsuo, M., Koga, Y. & Yamasato, K. (1992). Alteromonas atlantica sp. nov. and Alteromonas carrageenovora sp. nov., bacteria that decomposed algal polysaccharides. Int J Syst Bacteriol 42, 621-627.
2. Akagawa-Matsushita, M., Koga, Y. & Yamasato, K. (1993). DNA relatedness among nonpigmented species of Alteromonas and synonymy of Alteromonas haloplanktis (ZoBell and Upham 1944) Reichelt and Baumann 1973 and Alteromonas tetraodonis Simidu et al. 1990. Int J Syst Bacteriol 43, 500-503.
3. Andrykovitch, G. & Marx, I. (1988). Isolation of a new polysaccharide-digesting bacterium from a salt marsh. Appl Environ Microbiol 54, 1061-1062.
4. Aoki, T., Araki, T. & Kitamikado, M. (1990). Purification and characterization of β-agarase from Vibrio sp. AP-2. Bull Jpn Soc Sci Fish 56, 825-830.
5. Bakunina, I. Yu., Ivanova, E. P., Nedashkovskaya, O. I., Gorshkova, N. M., Elyakova, L. A. & Mikhailov, V. V. (1996). Search for α-galactosidase producers among marine bacteria of the genus Alteromonas. Prikl Biokhim Mikrobiol 32, 624-628 (in Russian).
6. Baumann, L., Baumann, P., Mandel, M. & Allen, R. D. (1972). Taxonomy of aerobic marine eubacteria. J Bacteriol 110, 402-429.
7. Baumann, P. & Baumann, L. (1981). The marine Gram-negative eubacteria; genera Photobacterium, Beneckea, Alteromonas, Pseudomonas, and Alcaligenes. In The Prokaryotes. A Handbook on Habitats, Isolation, and Identification of Bacteria, 1st edn, vol. 2, pp. 1302-1330. Edited by M. P. Starr, H. Stolp, H. G. Trüper, A. Balows & H. G. Schlegel. Berlin: Springer.
8. Baumann, P., Gauthier, M. J. & Baumann, L. (1984). Genus Alteromonas. Baumann, Baumann, Mandel and Allen 1972, 418. In Bergey's Manual of Systematic Bacteriology, vol. 1, pp. 343-354. Edited by N. R. Krieg & J. G. Holt. Baltimore: Williams & Wilkins.
9. Conway de Macario, E., Macario, A. J. L. & Wolin, M. J. (1982). Specific antisera and immunological procedures for characterization of methanogenic bacteria. J Bacteriol 149, 320-328.
10. De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem. 12, 133-142.
11. De Vos, P., Van Landschoot, A., Segers, P. & 9 other authors (1989). Genotypic relationships and taxonomic localization of unclassified Pseudomonas and Pseudomonase-like strains by deoxyribonucleic acid : ribosomal ribonucleic acid hybridization. Int J Syst Bacteriol 39, 35-49.
12. Enger, O., Nygaard, H., Solberg, M., Schel, G., Nielsen, J. & Dundas, I. (1987). Characterization of Alteromonas denitrificans sp. nov. Int J Syst Bacteriol 37, 416-421.
13. Gauthier, M. J. (1977). Alteromonas citrea, a new Gram-negative, yellow-pigmented species from seawater. Int J Syst Bacteriol 27, 349-354.
14. Gauthier, M. J. & Breittmayer, V. A. (1992). The genera Alteromonas and Marinomonas. In The Prokaryotes, 2nd edn, vol. 3, pp. 3046-3070. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K.-H. Schleifer. New York: Springer.
15. Gauthier, G., Gauthier, M. & Christen, R. (1995). Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and twelve new species combinations. Int J Syst Bacteriol 45, 755-761.
16. Grimes, D. J., Brayton, P., Colwell, R. R. & Gruber, S. H. (1985). Vibrios as autochtonous flora of neritic sharks. Syst Appl Microbiol 6, 221-226.
17. Hansen, A. J., Weeks, O. B. & Colwell, R. R. (1965). Taxonomy of Pseudomonas piscicida (Bein) Buck, Meyers, and Leifson. J Bacteriol 89, 752-761.
18. Humm, H. J. (1946). Marine agar-digesting bacteria of the south Atlantic coast. Bull Duke Univ Mar Lab 3, 43-75.
19. Ivanova, E. P., Kiprianova, E. A., Mikhailov, V. V., Levanova, G. F., Garagulya, A. D., Gorshkova, N. M., Yumoto, N. & Yoshikawa, S. (1996). Characterization and identification of marine Alteromonas nigrifaciens strains and emendation of the description. Int J Syst Bacteriol 46, 223-228.
20. Ivanova, E. P., Mikhailov, V. V., Kiprianova, E. A., Levanova, G. F., Garagulya, A. D., Frolova, G. M. & Svetashev, V. I. (1996). Alteromonas elyakovii sp. nov., a new bacterium isolated from marine mollusks. Biol Morya 22, 231-237 (in Russian).
21. Karaulin, A. Yu., Dzantiev, B. B., Orlova, G .G. & Egorov, A. M. (1990). Some ELISA peculiarities of the bacterial cells. Mikrobiol J (Ukrine) 9, 12-18 (in Russian).
22. Kelley, S. K., Coyne, V. E., Sledjeski, W. C., Fugua, R. M. & Weiner, R. M. (1990). Identification of a tyrosine from a prophetic marine bacterium. FEMS Microbiol Lett 67, 275-280.
23. Kiprianova, E. A., Ivanova, E. P., Levanova, G. F., Garagulya, A. D. & Smirnov, V. V. (1996). Microorganisms of Pseudo-alteromonas genus isolated from marine mussels. Mikrobiol J (Ukrine) 58, 3-11 (in Russian).
24. Kodama, K., Shiozawa, H. & Ishi, A. (1993). Alteromonas rava sp. nov., a marine bacterium that produces a new antibiotic, thiomarinol. Annu Rep Sankyo Res Lab 45, 131-136.
25. Lee, J. V., Gibson, D. M. & Shewan, J. M. (1981). Alteromonas putrefaciens sp. nov. Validation list no. 6. Int J Syst Bacteriol 31, 215-218.
26. Levanova, G. F., Novova, E. V., Sorokina, V. N. & Kiprianova, E. A. (1984). Spectrophotometric method of DNA-DNA molecular hybridization for bacteria of the genus Pseudomonas. Biol Sci 8, 27-32 (in Russian).
27. Marmur, J. (1961). A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3, 208-218.
28. Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
29. Nair, S., Kita-Tsukamoto, K. & Simidu, U. (1988). Bacterial flora of healthy and abnormal chaetognaths. Bull Jpn Soc Sci Fish 54, 491-496.
30. Romanenko, L. A., Lysendo, A. M., Mikhailov, V. V. & Kurika, A. V. (1994). A new species of brown-pigmented agarolytic bacteria of the genus Alteromonas. Mikrobiologiya 63, 1081-1087 (in Russian).
31. Romanenko, L. A., Mikhailov, V. V., Lysenko, A. M. & Stepanenko, V. I. (1995). A new species of melanin-producing bacteria of the genus Alteromonas. Mikrobiologiya 64, 74-77 (in Russian).
32. Rüger, H.-J. & Krambeck, H.-J. (1994). Evaluation of the BIOLOG substrate metabolism system for classification of marine bacteria. Syst Appl Microbiol 17, 281-288.
33. Simidu, U., Kita-Tsukamoto, K., Yasumoto, T. & Yotsu, M. (1990). Taxonomy of four marine bacterial strains that produce tetrodotoxin. Int J Syst Bacteriol 40, 331-336.
34. Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by F. Gerhardt. Washington, DC: American Society for Microbiology.
35. Svetashev, V. I., Vysotskii, M. V., Ivanova, E. P. & Mikhailov, V. V. (1995). Cellular fatty acid of Alteromonas species. Syst Appl Microbiol 18, 37-43.
36. Swann, G. A. (1974). Structure, chemistry and biosynthesis of melanins. Fortschr Chem Org Naturst 31, 521-582.
37. Turvey, J. R. & Christinson, J. (1967). The hydrolysis of algal galactans by enzymes from a Cytophaga species. Biochem J 105, 311-316.
38. Van Landschoot, A. & De Ley, J. (1983). Intra-and inter-generic similarities of the rRNA cistrons of Alteromonas, Marinomonas (gen. nov.) and some other Gram-negative bacteria. J Gen Microbiol 129, 3057-3074.
39. Voller, A., Bidwell, D. E. & Bartlett, A. (1979). Setting up ELISA. In The Enzyme-Linked Immunosorbent Assay (ELISA). A Guide with Abstracts of Microplate Applications, pp. 38-39. Guernsey: Dynatech Europe.
40. Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors. (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
41. Weiner, R. M., Segai, A. M. & Colwell, R. R. (1985). Characterization of a marine bacterium associated with Crassostrea virginica (the Eastern Oyster). Environ Appl Microbiol 40, 83-90.
42. Yamaura, I., Matsumoto, T., Fumatsu, M., Shigeri, H. & Shibata, T. (1991). Purification and some properties of agarase from Pseudomonas sp. PT-5. Agric Biol Chem 55, 2531-2536.
43. Yaphe, W. (1957). The use of agarase from Pseudomonas atlantica in the identification of agar in marine algae (Rhodophyceae). Can J Microbiol 3, 987-993.