Characterization and identification of marine Alteromonas nigrifaciens strains and emendation of the description

International Journal of Systematic Bacteriology

Volumn 46, Issue 1, 1996, Pages 223-228

  Ivanova, Elena P ^a,b,d   Kiprianova, Elena A ^c   Mikhailov, Valery V ^a   Levanova, Galina F ^d   Garagulya, Alexandra D ^c   Gorshkova, Nataliya M ^a   Yumoto, Noboru ^b   Yoshikawa, Susumu ^b  

^a PACIFIC INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

^b Institute of Epidemiology and Microbiology   (Russian Federation)

^c ZABOLOTNY INSTITUTE OF MICROBIOLOGY AND VIROLOGY   (Ukraine)

^d NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CYTOSINE; GUANINE; PIGMENT;

ANIMAL TISSUE; ARTICLE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; DNA DNA HYBRIDIZATION; DNA SEQUENCE; GRAM NEGATIVE BACTERIUM; MARINE ENVIRONMENT; MUSSEL; NONHUMAN; PRIORITY JOURNAL; SEQUENCE HOMOLOGY; TAXONOMY;

ALTEROMONAS; ANIMALIA; BACTERIA (MICROORGANISMS); CRENOMYTILUS GRAYANUS; NEGIBACTERIA; PATINOPECTEN; PSEUDOALTEROMONAS ATLANTICA; PSEUDOALTEROMONAS CARRAGEENOVORA; PSEUDOALTEROMONAS HALOPLANKTIS; PSEUDOALTEROMONAS NIGRIFACIENS; PSEUDOALTEROMONAS TETRAODONIS;

EID: 0030048918     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-46-1-223     Document Type: Article

References (30)

1. Aaronson, S. 1970. Procedures for the enrichment and/or isolation of microorganisms, p. 70-103. In Experimental microbial ecology. Academic Press, New York.
2. Akagawa-Matsushita, M., Y. Koga, and K. Yamasato. 1993. DNA relatedness among nonpigmented species of Alteromonas and synonymy of Alteromonas haloplanktis (ZoBell and Upham 1944) Reichelt and Baumann 1973 and Alteromonas tetraodonis Simidu et al. 1990. Int. J. Syst. Bacteriol. 43: 500-503.
3. Akagawa-Matsushita, M., M. Matsuo, Y. Koga, and K. Yamasato. 1992. Alteromonas atlantica sp. nov. and Alteromonas carrageenovora sp. nov., bacteria that decompose algal polysaccharides. Int. J. Syst. Bacteriol. 42:21-627.
4. Auling, G. Unpublished data.
5. Baumann, L., P. Baumann, M. Mandel, and R. D. Allen. 1972. Taxonomy of aerobic marine eubacteria. J. Bacteriol. 110:402-429.
6. Baumann, P., and L. Baumann. 1981. The marine Gram-negative eubacteria; genera Photobacterium, Beneckea, Alteromonas, Pseudomonas, and Alcaligenes, p. 1302-1330. In M. P. Starr, H. Stolp, H. G. Trüper, A. Balows, and H. G. Schlegel (ed.), The prokaryotes. A handbook on habitats, isolation, and identification of bacteria, 1st ed., vol. 2. Springer-Verlag AG, Berlin.
7. Baumann, P., L. Baumann, R. D. Bowditch, and B. Beaman. 1984. Taxonomy of Alteromonas: A. nigrifaciens sp. nov., nom. rev.; A. macleodii; and A. haloplanktis. Int. J. Syst. Bacteriol. 34:145-149.
8. Baumann, P., M. J. Gauthier, and L. Baumann. 1984. Genus Alteromonas Baumann, Baumann, Mandel and Allen, 1972, 418, p. 243-352. In N. R. Krieg and J. G. Holt (ed.), Bergey's manual of systematic bacteriology, vol. 1. The Williams & Wilkins Co., Baltimore.
9. De Ley, J., H. Cattoir, and A. Reynaerts. 1970. The quantitative measurement of DNA hybridization from renaturation rates. Eur. J. Biochem. 12: 133-142.
10. Doudoroff, M., and N.J. Palleroni. 1974. Genus Pseudomonas, p. 217-243. In R. E. Buchanan and N. E. Gibbons (ed.), Bergey's manual of determinative bacteriology, 8th ed. The Williams & Wilkins Co., Baltimore.
11. Enger, O., H. Nygaard, M. Solberg, G. Schel, J. Nielsen, and I. Dundas. 1987. Characterization of Alteromonas denitrificans sp. nov. Int. J. Syst. Bacteriol. 37:416-421.
12. Gauthier, G., M. Gauthier, and R. Christen. 1995. Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations. Int. J. Syst. Bacteriol. 45:755-761.
13. Gauthier, M. J., and V. A. Breittmayer. 1992. The genera Alteromonas and Marinomonas, p. 3046-3070. In A. Balows, H. G. Trüper, M. Dworkin, W. Harder, and K.-H. Schleifer (ed.), The prokaryotes, 2nd ed., vol. 3. Springer-Verlag, New York.
14. International Journal of Systematic Bacteriology. 1981. Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List no. 6. Int. J. Syst. Bacteriol. 31:215-218.
15. Ivanova, E. P., R. P. Gorshkova, V. V. Mikhailov, E. L. Nazarenko, V. A. Zubkov, E. A. Kiprianova, G. F. Levanova, A. D. Galagulya, E. A. Kolesova, and N. M. Gorshkova. 1994. Comparative study of the three marine bacteria strains of the genus Alteromonas and the description of their capsular polysaccharides. Mikrobiologiya 63:228-234. (In Russian.)
16. Johnstone, K. I. 1969. The isolation and cultivation of single organisms. Methods Microbiol. 1:455-471.
17. Kelley, S. K., V. E. Coyne, W. C. Sledjeski, R. M. Fugua, and R. M. Weiner. 1990. Identification of a tyrosinase from a periphytic marine bacterium. FEMS Microbiol. Lett. 67:275-280.
18. Kodama, K., H. Shiozawa, and A. Ishi. 1993. Alteromonas rava sp. nov., a marine bacterium that produces a new antibiotic, thiomarinol. Annu. Rep. Sankyo Res. Lab. 45:131-136.
19. Kovacs, N. 1956. Identificatrion of Pseudomonas pyocyanea by the oxidase reaction. Nature (London) 178:703.
20. Lemos, M. L., A. E. Toranzo, and J. L. Barja. 1985. Modified medium for oxidation-fermentation test in the identification of marine bacteria. Appl. Environ. Microbiol. 40:1541-1543.
21. Levanova, G. F., E. V. Novova, V. N. Sorokina, and E. A. Kiprianova. 1984. Spectrophotometric method of DNA-DNA molecular hybridization for bacteria of the genus Pseudomonas. Biol. Sci. 8:27-32. (In Russian.)
22. Marmur, J. 1961. A procedure for the isolation of deoxyribonucleic acid from microorganisms. J. Mol. Biol. 3:208-218.
23. Marmur, J., and P. Doty. 1962. Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J. Mol. Biol. 5:109-118.
24. Simidu, U., K. Kita-Tsukamoto, T. Yasumoto, and M. Yotsu. 1990. Taxonomy of four marine bacterial strains that produce tetrodotoxin. Int. J. Syst. Bacteriol. 40:331-336.
25. Smibert, R. M., and N. R. Krieg. 1993. Phenotypic characterization, p. 607-654. In P. Gerhardt, R. G. E. Murray, W. A. Wood, and N. R. Krieg (ed.), Methods for general and molecular bacteriology. American Society for Microbiology, Washington, D.C.
26. Svetashev, V. I., M. V. Vysotskii, E. P. Ivanova, and V. V. Mikhailov. 1995. Gas-liquid chromatographic analysis of cellular fatty acid methyl esters in Alteromonas species. Syst. Appl. Microbiol. 18:37-43.
27. Swan, G. A. 1974. Structure, chemistry and biosynthesis of melanins. Fortschr. Chem. Org. Naturst. 31:521-582.
28. Van Landschoot, A., and J. De Ley. 1983. Intra- and intergeneric similarities of the rRNA cistrons of Alteromonas, Marinomonas (gen. nov.) and some other Gram-negative bacteria. J. Gen. Microbiol. 129:3057-3074.
29. Wayne, L. G., D. J. Brenner, R. R. Colwell, P. A. D. Grimont, O. Kandler, M. I. Krichevsky, L. H. Moore, W. E. C. Moore, R. G. E. Murray, E. Stackebrandt, M. P. Starr, and H. G. Trüper. 1987. Report of the Ad Hoc Committee on Reconciliation of Approaches to Bacterial Systematics. Int. J. Syst. Bacteriol. 37:463-464.
30. White, A. H. 1940. A bacterial discoloration of print butter. Sci. Agric. 20:638-645.