Importance of Uracil DNA Glycosylase in Pseudomonas aeruginosa and Mycobacterium smegmatis, G+C-rich Bacteria, in Mutation Prevention, Tolerance to Acidified Nitrite, and Endurance in Mouse Macrophages

Journal of Biological Chemistry

Volumn 278, Issue 27, 2003, Pages 24350-24358

  Venkatesh, Jeganathan ^a   Kumar, Pradeep ^a   Krishna, Pulukuri Sai Murali ^a   Manjunath, Ramanathapuram ^a   Varshney, Umesh ^a  

^a INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; DNA; ENZYMES; GENES; NITRATES;

ABROGATION;

BIOCHEMISTRY;

GAMMA INTERFERON; NITRITE; URACIL DNA GLYCOSYLTRANSFERASE; DNA GLYCOSYLTRANSFERASE; GLYCOSIDASE; URACIL DNA GLYCOSIDASE;

ACIDIFICATION; ANIMAL CELL; ARTICLE; BACTERIAL GROWTH; DNA REPLICATION; EXCISION REPAIR; GENE; GENE DISRUPTION; GENE MUTATION; GENE TARGETING; GROWTH INHIBITION; MACROPHAGE ACTIVATION; MOUSE; MUTATOR GENE; MYCOBACTERIUM SMEGMATIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PSEUDOMONAS AERUGINOSA; UNG GENE; AMINO ACID SEQUENCE; ANIMAL; ANTIBIOTIC RESISTANCE; ENZYMOLOGY; GENETICS; MACROPHAGE; MICROBIOLOGY; MOLECULAR GENETICS; MUTATION; PATHOGENICITY; PHYSIOLOGY; SEQUENCE ALIGNMENT; VIRULENCE;

ACTINOBACTERIA (CLASS); ANIMALIA; BACTERIA (MICROORGANISMS); MYCOBACTERIUM; MYCOBACTERIUM SMEGMATIS; NEGIBACTERIA; PSEUDOMONAS; PSEUDOMONAS AERUGINOSA; UNCULTURED ACTINOMYCETE;

AMINO ACID SEQUENCE; ANIMALS; DNA GLYCOSYLASES; DRUG RESISTANCE, BACTERIAL; MACROPHAGES; MICE; MOLECULAR SEQUENCE DATA; MUTATION; MYCOBACTERIUM SMEGMATIS; N-GLYCOSYL HYDROLASES; NITRITES; PSEUDOMONAS AERUGINOSA; SEQUENCE ALIGNMENT; URACIL-DNA GLYCOSIDASE; VIRULENCE;

EID: 0042090471     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M302121200     Document Type: Article

References (57)

1. Lindahl, T. (1974) Proc. Natl. Acad. Sci. U. S. A. 71, 3649-3653
2. Cone, R., Bonura, T., and Friedberg, E. C. (1980) J. Biol. Chem. 255, 10354-10358
3. Krokan H. E., Standal, R., and Slupphaug, G. (1997) Biochem. J. 325, 1-16
4. Mosbaugh, D. W., and Bennett, S. E. (1994) Prog. Nucleic Acid Res. Mol. Biol. 48, 315-370
5. Pyles, R. B., and Thompson, R. L. (1994) J. Virol. 68, 4963-4972
6. Prichard, M. N., Duke, G. M., and Mocarski, E. S. (1996) J. Virol. 70, 3018-3025
7. Duncan, B. K., and Miller, J. H. (1980) Nature 287, 560-561
8. Impellizzeri, K. J., Anderson, B., and Burgers, P. M. (1991) J. Bacteriol. 21, 6807-6810
9. Nilsen, H., Rosewell, I., Robins, P., Skielbred, C. F., Andersen, S., Slupphaug, G., Daly, G., Krokan, H. E., Lindahl, T., and Barnes, D. E. (2000) Mol. Cell 5, 1059-1065
10. Jacobs, W. R., Jr., Kalpana, G. V., Cirillo, J. V., Pascopella, L., Snapper, S. B., Udani, R. A., Jones, W., Barletta, R. G., and Bloom, B. R. (1991) Methods Enzymol. 204, 537-555
11. Fels, A. O., and Cohn, Z. A. (1986) J. Appl. Physiol. 60, 353-369
12. Lancaster, J. R., Jr. (1996) Methods Enzymol. 268, 31-50
13. Wink, D. A., Kasprzak, K. S., Maragos, C. M., Elespuru, R. K., Misra, M., Dunams, T. M., Cebula, T. A., Koch, W. H., Andrews, A. W., and Allen, J. S. (1991) Science 254, 1001-1003
14. Snapper, S. B., Melton, R. E., Mustafa, S., Kieser, T., and Jacobs, W. R., Jr. (1990) Mol. Microbiol. 4, 1911-1919
15. Acharya, N., Roy, S., and Varshney, U. (2002) J. Mol. Biol. 32, 579-590
16. Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Ed., Cold Spring Harbor Laboratory, Cold Spring Harbor, NY
17. Kovach, M. E., Phillips, R. W., Elzer, P. H., Roop, R. M., II, and Peterson, K. M. (1994) Biotechniques 16, 800-802
18. Roy, S., Purnapatre, K., Handa, P., Boyanapalli, M., and Varshney, U. (1998) Protein Expression Purif. 13, 155-162
19. Dastur, A., Kumar, P., Ramesh, S., Vasanthakrishna, M., and Varshney, U. (2002) Arch. Microbiol. 178, 288-296
20. DasGupta, S. K., Jain, S., Kaushal, D., and Tyagi, A. K. (1998) Biochem. Biophys. Res. Commun. 246, 797-804
21. Pelicic, V., Jackson, M., Reyrat, J. M., Jacobs, W. R., Jr., Gicquel, B., and Guilhot, C. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 10955-10960
22. Hatfull, G. F., and Jacobs, W. B. (eds) (2002) Molecular Genetics of Mycobacteria, pp. 313-320, American Society for Microbiology, Washington, D. C.
23. Vasanthakrishna, M., Kumar, N. V., and Varshney, U. (1997) Microbiology 143, 3591-3598
24. Reed, K. C., and Mann, D. A. (1985) Nucleic Acids Res. 13, 7207-7221
25. Varshney, U., Lee, C. P., and RajBhandary, U. L. (1991) J. Biol. Chem. 266, 24712-24718
26. Sedmak, J. J., and Grossberg, S. E. (1977) Anal. Biochem. 79, 544-552
27. Acharya, N., and Varshney, U. (2002) J. Mol. Biol. 318, 1251-1264
28. Reddy G. B., Purnapatre, K., Lawrence, R., Roy, S., Varshney, U., and Surolia, A. (1999) Eur. J. Biochem. 261, 610-617
29. Morissette, C., Francoeur, C., Darmond-Zwaig, C., and Gervais, F. (1996) Infect. Immun. 64, 4984-4992
30. Rastogi, N., Labrousse, V., and de Sousa, J. P. (1992) Curr. Microbiol. 25, 203-213
31. Stuehr, D. J., Gross, S. S., Sakuma, I., Levi, R., and Nathan, C. F. (1989) J. Exp. Med. 169, 1011-1020
32. Savva, R., and Pearl, L. H. (1995) Nat. Struct. Biol. 2, 752-755
33. Mol, C. D., Arvai, A. S., Sanderson, R. J., Slupphaug, G., Kavli, B., Krokan, H. E., Mosbaugh, D. W., and Tainer, J. A. (1995) Cell 82, 701-708
34. Ravishankar, R., Bidya Sagar, M., Roy, S., Purnapatre, K., Handa, P., Varshney, U., and Vijayan, M. (1998) Nucleic Acids Res. 26, 4880-4887
35. Putnam, C. D., Shroyer, M. J. N., Lundquist, A. J., Mol, C. D., Arvai, A. S., Mosbaugh, D. W., and Tainer, J. A. (1999) J. Mol. Biol. 287, 331-346
36. Friedberg, E. C., Ganesan, A. K., and Minton, K. (1975) J. Virol. 16, 315-321
37. Noia, J. D., and Neuberger, M. S. (2002) Nature 419, 43-48
38. Hemavathy, K. C., and Nagaraja, V. (1995) FEMS Immunol. Med. Microbiol. 11, 291-296
39. O'Brien, L., Carmichael, J., Lowrie, D. B., and Andrew, P. W. (1994) Infect. Immun. 62, 5187-5190
40. Spek, E. J., Wright, T. L., Stitt, M. S., Taghizadeh, N. R., Tannenbaum, S. R., Marinus, M. G., and Engelward, B. P. (2001) J. Bacteriol. 183, 131-138
41. Olsen, L. C., Aasland, R., Krokan, H. E., and Helland, D. E. (1991) Nucleic Acids Res. 19, 4473-4478
42. Duncan, B. K., and Weiss, B. (1978) in DNA Repair Mechanisms (Hanawalt, P. C., Friedberg, E. C., and Fox, C. F., eds) pp. 183-186, Academic Press, Inc., New York
43. Mokkapati, S. K., Fernandez de Henestrosa, A. R., and Bhagwat, A. S. (2001) Mol. Microbiol. 41, 1101-1111
44. Duncan, B. K., and Weiss, B. (1982) J. Bacteriol. 151, 750-755
45. Mullaney, J., Moss, H. W., and MeGeoch, D. J. (1989) J. Gen. Virol. 70, 449-454
46. Willetts, K. E., Rey, F., Agostini, I., Navarro, J. M., Baudat, Y., Vigne, R., and Sire, J. (1999) J. Virol. 73, 1682-1688
47. Chen, J. D., and Lacks, S. A. (1991) J. Bacteriol. 173, 283-290
48. Shiloh, M. U., and Nathan, C. F. (2000) Curr. Opin. Microbiol. 1, 35-42
49. Liew, F. Y., and Cox, F. E. (1991) Immunol. Today 12, 17-21
50. Nathan, C. (1992) FASEB J. 6, 3051-3064
51. Lagier, B., Pelicic, V., Lecossier, D., Prod'hom, G., Rauzier, J., Guilhot, C., Gicquel, B., and Hance, A. J. (1998) Mol. Microbiol. 29, 465-475
52. Opperman, T., Murli, S., Smith, B. T., and Walker, G. (1999) Proc. Natl. Acad. Sci. U. S. A. 96, 9218-9223
53. Purnapatre, K., and Varshney, U. (1998) Eur. J. Biochem. 256, 580-588
54. Cole, S. T., Brosch, R., Parkhill, J., Garnier, T., Churcher, C., Harris, D., Gordon, S. V., Eiglmeier, K., Gas, S., Barry, C. E., III, Tekaia, F., Badcock, K., Basham, D., Brown, D., Chillingworth, T., Connor, R., Davies, R., Devlin, Feltwell, T., Gentles, S., Hamlin, N., Holroyd, S., Hornsby, T., Jagels, K., Krogh, A., McLean, J., Moule, S., Murphy, L., Oliver, K., Osborne, J., Quail, M. A., Rajandream, M.-A., Rogers, J., Rutter, S., Seeger, K., Skelton, J., Squares, R., Squares, S., Sulston, J. E., Taylor, K., Whitehead, S., and Barrell, B. G. (1998) Nature 393, 537-544
55. Sander, P., Papavinasasundaram, K. G., Dick, T., Stavropoulos, E., Ellrott, K., Springer, B., Colston, M. J., and Bottger, E. C. (2001) Infect. Immun. 69, 3562-3568
56. Datsenko, K. A., and Wanner, B. L. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 6640-6645
57. Diver, J. M., Bryan, L. E., and Sokol, P. A. (1990) Anal. Biochem. 189, 75-79