메뉴 건너뛰기




Volumn 31, Issue 15, 2003, Pages 4425-4433

Spurious spatial periodicity of co-expression in microarray data due to printing design

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; COMPLEMENTARY DNA;

EID: 0041660936     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg485     Document Type: Article
Times cited : (35)

References (34)
  • 1
    • 84984932472 scopus 로고    scopus 로고
    • Exploring the new world of the genome with DNA microarrays
    • Brown,P.O. and Botstein,D. (1999) Exploring the new world of the genome with DNA microarrays. Nature Genet., 21, 33-37.
    • (1999) Nature Genet. , vol.21 , pp. 33-37
    • Brown, P.O.1    Botstein, D.2
  • 3
    • 0036649020 scopus 로고    scopus 로고
    • Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters
    • Wu,L.F., Hughes,T.R., Davierwala,A.P., Robinson,M.D., Stoughton,R. and Altschuler,S.J. (2002) Large-scale prediction of Saccharomyces cerevisiae gene function using overlapping transcriptional clusters. Nature Genet., 31, 255-265.
    • (2002) Nature Genet. , vol.31 , pp. 255-265
    • Wu, L.F.1    Hughes, T.R.2    Davierwala, A.P.3    Robinson, M.D.4    Stoughton, R.5    Altschuler, S.J.6
  • 13
    • 0036898577 scopus 로고    scopus 로고
    • Microarray data normalization and transformation
    • Quackenbush,J. (2002) Microarray data normalization and transformation. Nature Genet., 32 (suppl.), 496-501.
    • (2002) Nature Genet. , vol.32 , Issue.SUPPL. , pp. 496-501
    • Quackenbush, J.1
  • 15
    • 0034730140 scopus 로고    scopus 로고
    • Singular value decomposition for genome-wide expression data processing and modeling
    • Alter,O., Brown,P.O. and Botstein,D. (2000) Singular value decomposition for genome-wide expression data processing and modeling. Proc. Natl Acad. Sci. USA, 97, 10101-10106.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 10101-10106
    • Alter, O.1    Brown, P.O.2    Botstein, D.3
  • 17
    • 0037119587 scopus 로고    scopus 로고
    • Stochastic gene expression in a single cell
    • Elowitz,M.B., Levine,A.J., Siggia,E.D. and Swain,P.S. (2002) Stochastic gene expression in a single cell. Science, 297, 1183-1186.
    • (2002) Science , vol.297 , pp. 1183-1186
    • Elowitz, M.B.1    Levine, A.J.2    Siggia, E.D.3    Swain, P.S.4
  • 19
    • 0035875553 scopus 로고    scopus 로고
    • Issues in cDNA microarray analysis: Quality filtering, channel normalization, models of variations and assessment of gene effects
    • Tseng,G.C., Oh,M.K., Rohlin,L., Liao,J.C. and Wong,W.H. (2001) Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects. Nucleic Acids Res., 29, 2549-2557.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 2549-2557
    • Tseng, G.C.1    Oh, M.K.2    Rohlin, L.3    Liao, J.C.4    Wong, W.H.5
  • 21
    • 1342294092 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
    • Yang,Y.H., Dudoit,S., Luu,P., Lin,D.M., Peng,V., Ngai,J. and Speed,T.P. (2002) Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res., 30, e15.
    • (2002) Nucleic Acids Res. , vol.30
    • Yang, Y.H.1    Dudoit, S.2    Luu, P.3    Lin, D.M.4    Peng, V.5    Ngai, J.6    Speed, T.P.7
  • 22
    • 0037417895 scopus 로고    scopus 로고
    • A segmental nearest neighbor normalization and gene identification method gives superior results for DNA-array analysis
    • Yang,H., Haddad,H., Tomas,C., Alsaker,K. and Papoutsakis,E.T. (2003) A segmental nearest neighbor normalization and gene identification method gives superior results for DNA-array analysis. Proc. Natl Acad. Sci. USA, 100, 1122-1127.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 1122-1127
    • Yang, H.1    Haddad, H.2    Tomas, C.3    Alsaker, K.4    Papoutsakis, E.T.5
  • 27
    • 0037072601 scopus 로고    scopus 로고
    • Chromatin higher order folding - Wrapping up transcription
    • Horn,P.J. and Peterson,C.L. (2002) Chromatin higher order folding - wrapping up transcription. Science, 297, 1824-1827.
    • (2002) Science , vol.297 , pp. 1824-1827
    • Horn, P.J.1    Peterson, C.L.2
  • 28
    • 0033780450 scopus 로고    scopus 로고
    • A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression
    • Cohen,B.A., Mitra,R.D., Hughes,J.D. and Church,G.M. (2000) A computational analysis of whole-genome expression data reveals chromosomal domains of gene expression. Nature Genet., 26, 183-186.
    • (2000) Nature Genet. , vol.26 , pp. 183-186
    • Cohen, B.A.1    Mitra, R.D.2    Hughes, J.D.3    Church, G.M.4
  • 30
    • 0036613754 scopus 로고    scopus 로고
    • Clustering of housekeeping genes provides a unified model of gene order in the human genome
    • Lercher,M.J., Urrutia,A.O. and Hurst,L.D. (2002) Clustering of housekeeping genes provides a unified model of gene order in the human genome. Nature Genet., 31, 180-183.
    • (2002) Nature Genet. , vol.31 , pp. 180-183
    • Lercher, M.J.1    Urrutia, A.O.2    Hurst, L.D.3
  • 31
    • 0003328368 scopus 로고    scopus 로고
    • Evidence for large domains of similarly expressed genes in the Drosophila genome
    • Spellman,P.T. and Rubin,G.M. (2002) Evidence for large domains of similarly expressed genes in the.Drosophila genome. J. Biol., 1, 5.
    • (2002) J. Biol. , vol.1 , pp. 5
    • Spellman, P.T.1    Rubin, G.M.2
  • 34
    • 0035824395 scopus 로고    scopus 로고
    • Chromosome dynamics in the yeast interphase nucleus
    • Heun,P., Laroche,T., Shimada,K., Furrer,P. and Gasser,S.M. (2001) Chromosome dynamics in the yeast interphase nucleus. Science, 294, 2181-2186.
    • (2001) Science , vol.294 , pp. 2181-2186
    • Heun, P.1    Laroche, T.2    Shimada, K.3    Furrer, P.4    Gasser, S.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.