-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0035107550
-
Contrasting patterns of X-linked and autosomal nucleotide variation in Drosophila melanogaster and Drosophila simulans
-
Andolfatto, P. 2001. Contrasting patterns of X-linked and autosomal nucleotide variation in Drosophila melanogaster and Drosophila simulans. Mol. Biol. Evol. 18:279-290.
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 279-290
-
-
Andolfatto, P.1
-
3
-
-
0034967711
-
Regions of lower crossing over harbor more rare variants in African populations of Drosophila melanogaster
-
Andolfatto, P., and M. Przeworski. 2001. Regions of lower crossing over harbor more rare variants in African populations of Drosophila melanogaster. Genetics. 158:657-665.
-
(2001)
Genetics
, vol.158
, pp. 657-665
-
-
Andolfatto, P.1
Przeworski, M.2
-
4
-
-
0004224917
-
-
American Society for Microbiology, Washington DC
-
Berg, D. E., and M. M. Howe. 1989. Mobile DNA. American Society for Microbiology, Washington DC.
-
(1989)
Mobile DNA
-
-
Berg, D.E.1
Howe, M.M.2
-
6
-
-
0030902601
-
The estimation of the number and the length distribution of gene conversion tracts from population DNA sequence data
-
Betrán, E., J. Rozas, A. Navarro, and A. Barbadilla. 1997. The estimation of the number and the length distribution of gene conversion tracts from population DNA sequence data. Genetics. 146:89-99.
-
(1997)
Genetics
, vol.146
, pp. 89-99
-
-
Betrán, E.1
Rozas, J.2
Navarro, A.3
Barbadilla, A.4
-
7
-
-
0022611992
-
A model for DNA sequence evolution within transposable element families
-
Brookfield, J. F. 1986. A model for DNA sequence evolution within transposable element families. Genetics. 112:393-407.
-
(1986)
Genetics
, vol.112
, pp. 393-407
-
-
Brookfield, J.F.1
-
9
-
-
0012340085
-
Finishing a whole-genome shotgun: Release 3 of the Drosophila melanogaster euchromatic genome sequence
-
RESEARCH0079.1-14
-
Celniker, S. E., D. A. Wheeler, B. Kronmiller et al. (32 co-authors). 2002. Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence. Genome Biol. 3:RESEARCH0079.1-14.
-
(2002)
Genome Biol.
, vol.3
-
-
Celniker, S.E.1
Wheeler, D.A.2
Kronmiller, B.3
-
10
-
-
0000789520
-
The populaton genetics of transposable elements
-
T. Otha and K. Aoki, eds. Japan Science Society Press, Springer-Verlag, Berlin
-
Charlesworth, B. 1985. The populaton genetics of transposable elements. Pp. 213-232 in T. Otha and K. Aoki, eds. Population genetics and molecular evolution. Japan Science Society Press, Springer-Verlag, Berlin.
-
(1985)
Population Genetics and Molecular Evolution
, pp. 213-232
-
-
Charlesworth, B.1
-
11
-
-
0022968470
-
Genetic divergence between transposable elements
-
-. 1986. Genetic divergence between transposable elements. Genet. Res. 48:111-118.
-
(1986)
Genet. Res.
, vol.48
, pp. 111-118
-
-
-
12
-
-
0029800853
-
Background selection and patterns of genetic diversity in Drosophila melanogaster
-
-. 1996. Background selection and patterns of genetic diversity in Drosophila melanogaster. Genet. Res. 68:131-149.
-
(1996)
Genet. Res.
, vol.68
, pp. 131-149
-
-
-
13
-
-
0030821992
-
Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
-
Fu, Y. X. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics. 147:915-925.
-
(1997)
Genetics
, vol.147
, pp. 915-925
-
-
Fu, Y.X.1
-
14
-
-
0026418313
-
Targeted gene replacement in Drosophila via P element-induced gap repair
-
Gloor, G. B., N. A. Nassif, D. M. Johnson-Schlitz, C. R. Preston, and W. R. Engels. 1991. Targeted gene replacement in Drosophila via P element-induced gap repair. Science. 253:1110-1117.
-
(1991)
Science
, vol.253
, pp. 1110-1117
-
-
Gloor, G.B.1
Nassif, N.A.2
Johnson-Schlitz, D.M.3
Preston, C.R.4
Engels, W.R.5
-
15
-
-
0030965737
-
What restricts the activity of mariner-like transposable elements?
-
Hartl, D. L., E. R. Lozovskaya, D. I. Nurminsky, and A. R. Lohe. 1997. What restricts the activity of mariner-like transposable elements? Trends Genet. 13:197-201.
-
(1997)
Trends Genet.
, vol.13
, pp. 197-201
-
-
Hartl, D.L.1
Lozovskaya, E.R.2
Nurminsky, D.I.3
Lohe, A.R.4
-
16
-
-
0027178798
-
Population genetics and phylogenetics of DNA sequence variation at multiple loci within the Drosophila melanogaster species complex
-
Hey, J., and R. M. Kliman. 1993. Population genetics and phylogenetics of DNA sequence variation at multiple loci within the Drosophila melanogaster species complex. Mol. Biol. Evol. 10:804-822.
-
(1993)
Mol. Biol. Evol.
, vol.10
, pp. 804-822
-
-
Hey, J.1
Kliman, R.M.2
-
17
-
-
0026512283
-
A statistical test for detecting geographic subdivision
-
Hudson, R. R., D. D. Boos, and N. L. Kaplan. 1992. A statistical test for detecting geographic subdivision. Mol. Biol. Evol. 9:138-151.
-
(1992)
Mol. Biol. Evol.
, vol.9
, pp. 138-151
-
-
Hudson, R.R.1
Boos, D.D.2
Kaplan, N.L.3
-
18
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
-
Hudson, R. R., and N. L. Kaplan. 1985. Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics. 111:147-164.
-
(1985)
Genetics
, vol.111
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
19
-
-
0022632187
-
On the divergence of members of a transposable element family
-
-. 1986. On the divergence of members of a transposable element family. J. Math. Biol. 24:207-215.
-
(1986)
J. Math. Biol.
, vol.24
, pp. 207-215
-
-
-
20
-
-
0036191715
-
Patterns of genetic variation at a chromosome 4 locus of Drosophila melanogaster and D. simulans
-
Jensen, M. A., B. Charlesworth, and M. Kreitman. 2002. Patterns of genetic variation at a chromosome 4 locus of Drosophila melanogaster and D. simulans. Genetics. 160:493-507.
-
(2002)
Genetics
, vol.160
, pp. 493-507
-
-
Jensen, M.A.1
Charlesworth, B.2
Kreitman, M.3
-
22
-
-
0037735147
-
-
Arizona State University, Tempe, Arizona
-
Kumar, A., K. Tamura, I. B. Jakobsen, and M. Nei. 2001. MEGA2: molecular evolutionary genetics analysis software, Arizona State University, Tempe, Arizona.
-
(2001)
MEGA2: Molecular Evolutionary Genetics Analysis Software
-
-
Kumar, A.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
23
-
-
0034530392
-
Linkage disequilibria and the site frequency spectra in the su(s) and su(w(a)) regions of the Drosophila melanogaster X chromosome
-
Langley, C. H., B. P. Lazzaro, W. Phillips, E. Heikkinen, and J. M. Braverman. 2000. Linkage disequilibria and the site frequency spectra in the su(s) and su(w(a)) regions of the Drosophila melanogaster X chromosome. Genetics. 156:1837-1852.
-
(2000)
Genetics
, vol.156
, pp. 1837-1852
-
-
Langley, C.H.1
Lazzaro, B.P.2
Phillips, W.3
Heikkinen, E.4
Braverman, J.M.5
-
24
-
-
0028784999
-
S elements: A family of Tcl-like transposons in the genome of Drosophila melanogaster
-
Merriman, P. J., C. D. Grimes, J. Ambroziak, D. A. Hackett, P. Skinner, and M. J. Simmons. 1995. S elements: a family of Tcl-like transposons in the genome of Drosophila melanogaster. Genetics. 141:1425-1438.
-
(1995)
Genetics
, vol.141
, pp. 1425-1438
-
-
Merriman, P.J.1
Grimes, C.D.2
Ambroziak, J.3
Hackett, D.A.4
Skinner, P.5
Simmons, M.J.6
-
26
-
-
0021837651
-
A model of duplicative transposition and gene conversion for repetitive DNA families
-
Ohta, T. 1985. A model of duplicative transposition and gene conversion for repetitive DNA families. Genetics. 110:513-524.
-
(1985)
Genetics
, vol.110
, pp. 513-524
-
-
Ohta, T.1
-
27
-
-
0034914597
-
The evolutionary life history of P transposons: From horizontal invaders to domesticated neogenes
-
Pinsker, W., E. Haring, S. Hagemann, and W. J. Miller. 2001. The evolutionary life history of P transposons: from horizontal invaders to domesticated neogenes. Chromosoma. 110:148-158.
-
(2001)
Chromosoma
, vol.110
, pp. 148-158
-
-
Pinsker, W.1
Haring, E.2
Hagemann, S.3
Miller, W.J.4
-
28
-
-
0033179759
-
Resident aliens: The Tc1/mariner superfamily of transposable elements
-
Plasterk, R. H., Z. Izsvak, and Z. Ivics. 1999. Resident aliens: the Tc1/mariner superfamily of transposable elements. Trends Genet. 15:326-332.
-
(1999)
Trends Genet.
, vol.15
, pp. 326-332
-
-
Plasterk, R.H.1
Izsvak, Z.2
Ivics, Z.3
-
29
-
-
0030861159
-
Evolution of codon usage bias in Drosophila
-
Powell, J. R., and E. N. Moriyama. 1997. Evolution of codon usage bias in Drosophila. Proc. Natl. Acad. Sci. USA. 94:7784-7790.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 7784-7790
-
-
Powell, J.R.1
Moriyama, E.N.2
-
30
-
-
0032972599
-
DnaSP version 3: An integrated program for molecular population genetics and molecular evolution analysis
-
Rozas, J. R. 1999. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics. 15:174-175.
-
(1999)
Bioinformatics
, vol.15
, pp. 174-175
-
-
Rozas, J.R.1
-
31
-
-
0028910659
-
Molecular phylogeny and divergence times of drosophilid species
-
Russo, C., N. Takezaki, and M. Nei. 1995. Molecular phylogeny and divergence times of drosophilid species. Mol. Biol. Evol. 12:391-404.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 391-404
-
-
Russo, C.1
Takezaki, N.2
Nei, M.3
-
32
-
-
0034736507
-
DNA evolution under weak selection
-
Tachida, H. 2000. DNA evolution under weak selection. Gene. 261:3-9.
-
(2000)
Gene
, vol.261
, pp. 3-9
-
-
Tachida, H.1
-
33
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima, F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics. 123:585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
34
-
-
0031777618
-
Rate variation of DNA sequence evolution in the Drosophila lineages
-
Takano, T. S. 1998. Rate variation of DNA sequence evolution in the Drosophila lineages. Genetics. 149:959-970.
-
(1998)
Genetics
, vol.149
, pp. 959-970
-
-
Takano, T.S.1
-
35
-
-
0031574072
-
The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
36
-
-
0037045413
-
Intra- and inter-specific diversity of Tc3-like transposons in nematodes and insects and implications for their evolution and transposition
-
Tu, Z., and H. Shao. 2002. Intra- and inter-specific diversity of Tc3-like transposons in nematodes and insects and implications for their evolution and transposition. Gene. 282:133-142.
-
(2002)
Gene.
, vol.282
, pp. 133-142
-
-
Tu, Z.1
Shao, H.2
-
37
-
-
0032884643
-
Recombination and the power of statistical tests of neutrality
-
Wall, J. D. 1999. Recombination and the power of statistical tests of neutrality. Genet. Res. 74:65-79.
-
(1999)
Genet. Res.
, vol.74
, pp. 65-79
-
-
Wall, J.D.1
-
38
-
-
0037016489
-
Nucleotide variation along the Drosophila melanogaster fourth chromosome
-
Wang, W., K. Thornton, A. Berry, and M. Long. 2002. Nucleotide variation along the Drosophila melanogaster fourth chromosome. Science. 295:134-137.
-
(2002)
Science
, vol.295
, pp. 134-137
-
-
Wang, W.1
Thornton, K.2
Berry, A.3
Long, M.4
-
39
-
-
0016491430
-
On the number of segregating sites in genetical models without recombination
-
Watterson, G. A. 1975. On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol. 7:256-276.
-
(1975)
Theor. Popul. Biol.
, vol.7
, pp. 256-276
-
-
Watterson, G.A.1
-
40
-
-
0025318864
-
The 'effective number of codons' used in a gene
-
Wright, F. 1990. The 'effective number of codons' used in a gene. Gene. 87:23-29.
-
(1990)
Gene.
, vol.87
, pp. 23-29
-
-
Wright, F.1
-
41
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Yang, Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13:555-556.
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 555-556
-
-
Yang, Z.1
|