Linkage disequilibria and the site frequency spectra in the su(s) and su(wa) regions of the Drosophila melanogaster X chromosome

Genetics

Volumn 156, Issue 4, 2000, Pages 1837-1852

  Langley, C H ^a   Lazzaro, B P ^a   Phillips, W ^a   Heikkinen, E ^a   Braverman, J M ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BASE PAIRING; CROSSING OVER; DNA POLYMORPHISM; DNA SEQUENCE; DROSOPHILA MELANOGASTER; GENE CONVERSION; GENE LINKAGE DISEQUILIBRIUM; GENETIC SELECTION; GENOME; HETEROZYGOSITY; MUTATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SINGLE STRAND CONFORMATION POLYMORPHISM; X CHROMOSOME;

ANIMALS; BASE SEQUENCE; CROSSING OVER, GENETIC; DNA; DROSOPHILA MELANOGASTER; DROSOPHILA PROTEINS; GENE FREQUENCY; LINKAGE DISEQUILIBRIUM; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; POLYMORPHISM, GENETIC; POLYMORPHISM, SINGLE-STRANDED CONFORMATIONAL; PROTEINS; RNA-BINDING PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, NUCLEIC ACID; SPAIN; X CHROMOSOME; ZIMBABWE;

EID: 0034530392     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (46)

1. Polymorphism and divergence in regions of low recombination in Drosophila
2. Reduced variation in the yellow-achaete-scute region in natural populations of Drosophila melanogaster
3. a) regions of the Drosophila melanogaster X chromosome
4. The effect of gene conversion on intralocus associations
5. Selection, recombination, and DNA polymorphism in Drosophila
6. Levels of naturally occurring DNA polymorphism correlate with recombination rates in D melanogaster
7. African and North American populations of Drosophila melanogaster are very different at the DNA level
8. Lack of polymorphism on the Drosophila fourth chromosome resulting from selection
9. The hitchhiking effect on the site frequency spectrum of DNA polymorphisms
10. The effect of background selection against deleterious mutations on weakly selected, linked variants
11. Background selection and patterns of genetic diversity in Drosophila melanogaster
12. Measures of divergence between populations and the effect of forces that reduce variability
13. The effect of deleterious mutations on neutral molecular variation
14. The role of the mismatch repair machinery in regulating mitotic and meiotic recombination between diverged sequences in yeast
15. Genetic variation of Drosophila melanogaster natural populations
16. Restriction fragment length polymorphism and divergence in the genomic regions of high and low recombination in self-fertilizing and cross-fertilizing Aegilops species
17. Gene conversion in Drosophila
18. Junk ain't what junk does neutral alleles in a selected context
19. Maximum-likelihood estimation of gene location by linkage disequilibrium
20. Meiotic gene conversion tract length distribution within the rosylocus of Drosophila melanogaster
21. Estimating the recombination parameter of a finite population model without selection
22. Gene genealogies and the coalescent process
23. Statistical properties of the number of recombination events in the history of a sample of DNA sequences
24. Deleterious background selection with recombination
25. Estimation of levels of gene flow from DNA sequence data
26. The 'hitchhiking effect' revisited
27. Conversion-type and restoration-type repair of DNA mismatches formed during meiotic recombination in Saccharomyces cerevisiae
28. Lack of correlation between interspecific divergence and intra-specific polymorphism at the suppressor of forked region in Drosophila melanogaster and Drosophila simulans
29. The interchromosomal control of recombination
30. Intraspecific and interspecific variation at the y-ac-sc region of Drosophila simulans and Drosophila melanogaster
31. The hitch-hiking effect of favorable genes
32. Molecular and phenotypic variation of the white locus region in Drosophila melanogaster
33. Linkage disequilibrium in the white locus region of Drosophila melanogaster
34. Patterns of DNA variability at X-linked loci in Mus domesticus
35. DNA homology, requirements for mitotic gap repair in Drosophila
36. The effect of recombination on background selection
37. P-element-induced male recombination and gene conversion in Drosophila
38. The effect of sequence homozygosity on the frequency of X-chromosomal exchange in Drosophila melanogaster females
39. Effects of genetic recombination and population subdivision on nucleotide sequence variation in Drosophila ananassae
40. Molecular genetic variation in the centromeric region of the X chromosome in three Drosophila ananassae populations I Contrasts between the vermilion and forked loci
41. Evolutionary consequences of DNA mismatch inhibited repair opportunity
42. DNA polymorphism in Lycopersicon and crossing over per physical length
43. A test of the background selection hypothesis based on nucleotide data from Drosophila ananassae
44. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
45. Recombination and the power of statistical tests of neutrality