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Volumn 13, Issue 5, 2003, Pages 813-820

Quantitative estimates of sequence divergence for comparative analyses of mammalian genomes

Author keywords

[No Author keywords available]

Indexed keywords

DNA BASE; NUCLEOTIDE;

EID: 0038781885     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.1064503     Document Type: Article
Times cited : (103)

References (20)
  • 1
    • 0037398368 scopus 로고    scopus 로고
    • LAGAN and Multi-LAGAN: Efficient tools for large-scale multiple alignment of genomic DNA
    • NISC Comparative Sequencing Program
    • Brudno, M., Do, C.B., Cooper, G.M., Kim, M.F., Davydov, E., NISC Comparative Sequencing Program, Sidow A., and Batzoglou, S. 2003. LAGAN and Multi-LAGAN: Efficient tools for large-scale multiple alignment of genomic DNA. Genome Res. 13: 721-731.
    • (2003) Genome Res. , vol.13 , pp. 721-731
    • Brudno, M.1    Do, C.B.2    Cooper, G.M.3    Kim, M.F.4    Davydov, E.5    Sidow, A.6    Batzoglou, S.7
  • 3
    • 0022376704 scopus 로고
    • Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
    • Hasegawa, M., Kishino, H., and Yano, T. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22: 160-174.
    • (1985) J. Mol. Evol. , vol.22 , pp. 160-174
    • Hasegawa, M.1    Kishino, H.2    Yano, T.3
  • 5
    • 0004046696 scopus 로고
    • The neutral theory of molecular evolution
    • Cambridge University Press, Cambridge, UK
    • Kimura, M. 1983. The neutral theory of molecular evolution. Cambridge University Press, Cambridge, UK.
    • (1983)
    • Kimura, M.1
  • 6
    • 0003421005 scopus 로고    scopus 로고
    • Molecular evolution
    • Sinauer Associates, Sunderland, MA
    • Li, W.-H. 1997. Molecular evolution. Sinauer Associates, Sunderland, MA.
    • (1997)
    • Li, W.-H.1
  • 8
    • 0035504763 scopus 로고    scopus 로고
    • Understanding human disease mutations through the use of interspecific genetic variation
    • Miller, M.P. and Kumar, S. 2001. Understanding human disease mutations through the use of interspecific genetic variation. Hum. Mol. Genet. 10: 2319-2328.
    • (2001) Hum. Mol. Genet. , vol.10 , pp. 2319-2328
    • Miller, M.P.1    Kumar, S.2
  • 12
    • 0036737630 scopus 로고    scopus 로고
    • Impact of the presence of paralogs on sequence divergence in a set of mouse-human orthologs
    • Nembaware, V., Crum, K., Kelso, J., and Seoighe, C. 2002. Impact of the presence of paralogs on sequence divergence in a set of mouse-human orthologs. Genome Res. 12: 1370-1376.
    • (2002) Genome Res. , vol.12 , pp. 1370-1376
    • Nembaware, V.1    Crum, K.2    Kelso, J.3    Seoighe, C.4
  • 13
    • 0028955455 scopus 로고
    • Synonymous and nonsynonymous substitutions in mammalian genes and the nearly neutral theory
    • Ohta, T. 1995. Synonymous and nonsynonymous substitutions in mammalian genes and the nearly neutral theory. J. Mol. Evol. 40: 56-63.
    • (1995) J. Mol. Evol. , vol.40 , pp. 56-63
    • Ohta, T.1
  • 14
    • 0035261381 scopus 로고    scopus 로고
    • Genomic strategies to identify mammalian regulatory sequences
    • Pennacchio, L.A. and Rubin, E.M. 2001. Genomic strategies to identify mammalian regulatory sequences. Nat. Rev. Genet. 2: 100-109.
    • (2001) Nat. Rev. Genet. , vol.2 , pp. 100-109
    • Pennacchio, L.A.1    Rubin, E.M.2
  • 15
    • 0035308094 scopus 로고    scopus 로고
    • Human and mouse ABCA1 comparative sequencing and transgenesis studies revealing novel regulatory sequences
    • Qiu, Y., Cavelier, L., Chiu, S., Yang, X., Rubin, E., and Cheng, J.F. 2001. Human and mouse ABCA1 comparative sequencing and transgenesis studies revealing novel regulatory sequences. Genomics 73: 66-76.
    • (2001) Genomics , vol.73 , pp. 66-76
    • Qiu, Y.1    Cavelier, L.2    Chiu, S.3    Yang, X.4    Rubin, E.5    Cheng, J.F.6
  • 16
    • 0037020214 scopus 로고    scopus 로고
    • Sequence first. Ask questions later
    • Sidow, A. 2002. Sequence first. Ask questions later. Cell 111: 13.
    • (2002) Cell , vol.111 , pp. 13
    • Sidow, A.1
  • 17
    • 0035862568 scopus 로고    scopus 로고
    • An efficient cis-element discovery method using multiple sequence comparisons based on evolutionary relationships
    • Sumiyama, K., Kim, C.B., and Ruddle, F.H. 2001. An efficient cis-element discovery method using multiple sequence comparisons based on evolutionary relationships. Genomics 71: 260-262.
    • (2001) Genomics , vol.71 , pp. 260-262
    • Sumiyama, K.1    Kim, C.B.2    Ruddle, F.H.3
  • 18
    • 0025299347 scopus 로고
    • The expected equilibrium of the CpG dinucleotide in vertebrate genomes under a mutation model
    • Sved, J. and Bird, A. 1990. The expected equilibrium of the CpG dinucleotide in vertebrate genomes under a mutation model. Proc. Natl. Acad. Sci. 87: 4692-4696.
    • (1990) Proc. Natl. Acad. Sci. , vol.87 , pp. 4692-4696
    • Sved, J.1    Bird, A.2
  • 19
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., and Gibson, T.J. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 20
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • Yang, Z. 1997. PAML: A program package for phylogenetic analysis by maximum likelihood. CABIOS 13: 555-556.
    • (1997) CABIOS , vol.13 , pp. 555-556
    • Yang, Z.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.