Architecture of the replication complex and DNA loops at the fork generated by the bacteriophage T4 proteins

Journal of Biological Chemistry

Volumn 278, Issue 23, 2003, Pages 21276-21285

  Chastain II, Paul D ^a   Makhov, Alexander M ^a   Nossal, Nancy G ^b   Griffith, Jack ^a  

^a UNIVERSITY OF NORTH CAROLINA   (United States)

^b NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEXATION; DNA; ELECTRON MICROSCOPY; PROTEINS; SYNTHESIS (CHEMICAL);

REPLICATION COMPLEXES;

BIOCHEMISTRY;

BACTERIOPHAGE PROTEIN; CIRCULAR DNA; DNA; DNA BINDING PROTEIN; DNA FRAGMENT; DNA LOOP; DOUBLE STRANDED DNA; GENE PRODUCT; OKAZAKI FRAGMENT; PROTEIN; REPLICATION PROTEIN; REPLISOME; SINGLE STRANDED DNA; UNCLASSIFIED DRUG;

ARTICLE; BACTERIOPHAGE T4; DNA PROTEIN COMPLEX; DNA REPLICATION; DNA REPLICATION COMPLEX; DNA REPLICATION FORK; DNA STRAND; DNA STRUCTURE; DNA SYNTHESIS; LAGGING STRAND; LEADING STRAND; MEMBRANE VESICLE; MOLECULAR WEIGHT; NONHUMAN; PRIORITY JOURNAL; ROLLING CIRCLE REPLICATION;

BACTERIOPHAGE T4; DNA HELICASES; DNA PRIMASE; DNA, SINGLE-STRANDED; DNA-DIRECTED DNA POLYMERASE; MICROSCOPY, ELECTRON; NUCLEIC ACID CONFORMATION; REPLICATION ORIGIN; VIRAL PROTEINS;

PROKARYOTA;

EID: 0038756406     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M301573200     Document Type: Article

References (40)

1. Sinha, N. K., Morris, C. F., and Alberts, B. M. (1980) J. Biol. Chem. 255, 4290-4293
2. Alberts, B. M., Barry, J., Bedinger, P., Formosa, T., Jongeneel, C. V., and Kreuzer, K. N. (1983) Cold Spring Harbor Symp. Quant. Biol. 47, 655-668
3. Formosa, T., Burke, R. L., and Alberts, B. M. (1983) Proc. Natl. Acad. Sci. U. S. A. 80, 2442-2446
4. Yuzhakov, A., Turner, J., and O'Donnell, M. (1996) Cell 86, 877-886
5. Wu, C. A., Zechner, E. L., Hughes, A. J., Jr., Franden, M. A., McHenry, C. S., and Marians, K. J. (1992) J. Biol. Chem. 267, 4064-4073
6. Maki, H., Maki, S., and Kornberg, A. (1988) J. Biol. Chem. 263, 6570-6578
7. Glover, B. P., and McHenry, C. S. (2001) Cell 105, 925-934
8. Tougu, K., and Marians, K. J. (1996) J. Biol. Chem. 271, 21398-21405
9. Kim, S., Dallmann, H. G., McHenry, C. S., and Marians, K. J. (1996) Cell 84, 643-650
10. Schrock, R. D., and Alberts, B. (1996) J. Biol. Chem. 271, 16678-16682
11. Richardson, R. W., Ellis, R. L., and Nossal, N. G. (1990) UCLA Symp. Mol. Cell. Biol. 127, 247-259
12. Debyser, Z., Tabor, S., and Richardson, C. C. (1994) Cell 77, 157-166
13. Lee, J., Chastain, P. D., 2nd, Griffith, J. D., and Richardson, C. C. (2002) J. Mol. Biol. 316, 19-34
14. Lee, J., Chastain, P. D., 2nd, Kusakabe, T., Griffith, J. D., and Richardson, C. C. (1998) Mol. Cell 1, 1001-1010
15. Salinas, F., and Benkovic, S. J. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 7196-7201
16. Park, K., Debyser, Z., Tabor, S., Richardson, C. C., and Griffith, J. D. (1998) J. Biol. Chem. 273, 5260-5270
17. Nossal, N. G. (ed) (1994) in Molecular Biology Bacteriophage T4 (Karem, J. D., ed) pp. 43-53, American Society of Microbiology, Washington, D. C.
18. Benkovic, S. J., Valentine, A. M., and Salinas, F. (2001) Annu. Rev. Biochem. 70, 181-208
19. Capson, T. L., Benkovic, S. J., and Nossal, N. G. (1991) Cell 65, 249-258
20. Mace, D. C., and Alberts, B. M. (1984) J. Mol. Biol. 177, 313-327
21. Alley, S. C., Abel-Santos, E., and Benkovic, S. J. (2000) Biochemistry 39, 3076-3090
22. Pietroni, P., Young, M. C., Latham, G. J., and von Hippel, P. H. (2001) J. Mol. Biol. 309, 869-891
23. Mueser, T. C., Jones, C. E., Nossal, N. G., and Hyde, C. C. (2000) J. Mol. Biol. 296, 597-612
24. Jones, C. E., Mueser, T. C., and Nossal, N. G. (2000) J. Biol. Chem. 275, 27145-27154
25. Barry, J., and Alberts, B. M. (1994) J. Biol. Chem. 9, 33049-33062
26. Spacciapoli, P., and Nossal, N. G. (1994) J. Biol. Chem. 269, 447-455
27. Lefebvre, S. D., Wong, M. L., and Morrical, S. W. (1999) J. Biol. Chem. 274, 22830-22838
28. Nossal, N. G., Hinton, D. M., Hobbs, L. J., and Spacciapoli, P. (1995) Methods Enzymol. 262, 560-584
29. Chastain, P. D., 2nd, Makhov, A. M., Nossal, N. G., and Griffith, J. D. (2000) Mol. Cell 6, 803-814
30. Griffith, J. D., and Christiansen, G. (1978) Annu. Rev. Biophys. Bioeng. 7, 19-35
31. Bhagwat, M., and Nossal, N. G. (2001) J. Biol. Chem. 276, 28516-28524
32. Selik, H. E., Barry, J., Cha, T.-A., Munn, M., Nakanishi, M., Wong, M. L., and Alberts, B. M. (1987) in DNA Replication and Recombination (McMacken, R., and Kelley, T. J., eds) Vol. 47, pp. 183-214, Alan R. Liss, Inc., New York
33. Delius, H., Mantell, N. J., and Alberts, B. (1972) J. Mol. Biol. 67, 341-350
34. Griffith, J. D., Makhov, A., Zawel, L., and Reinberg, D. (1995) J. Mol. Biol. 246, 576-584
35. Morrical, S. W., Wong, M. L., and Alberts, B. M. (1991) J. Biol. Chem. 266, 14031-14038
36. Kim, Y. T., Tabor, S., Bortner, C., Griffith, J. D., and Richardson, C. C. (1992) J. Biol. Chem. 267, 15022-15031
37. Nossal, N. G., and Hershfield, M. S. (1971) J. Biol. Chem. 246, 5414-5426
38. Kadyrov, F. A., and Drake, J. W. (2002) Nucleic Acids Res. 30, 4387-4397
39. Delagoutte, E., and von Hippel, P. H. (2001) Biochemistry 40, 4459-4477
40. Ishmael, F. T., Trakselis, M. A., and Benkovic, S. J. (2003) J. Biol. Chem. 278, 3145-3152