메뉴 건너뛰기




Volumn 131, Issue 2, 2003, Pages 177-187

Two apple repetitive sequence elements: Characterisation and potential use as genetic markers

Author keywords

Apple; Fingerprinting; Genetic markers; Rosaceae; Transposable elements

Indexed keywords

EMBRYOPHYTA; MALUS; MALUS PUMILA; MALUS X DOMESTICA; PYRUS COMMUNIS; PYRUS PYRIFOLIA; ROSACEAE; TRANSPOSONS;

EID: 0038381420     PISSN: 00142336     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1023927230958     Document Type: Article
Times cited : (6)

References (39)
  • 2
    • 0028450046 scopus 로고
    • Stowaway: A new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants
    • Bureau, T.E. & S.R. Wessler, 1994. Stowaway: A new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants. Plant Cell 6: 907-916.
    • (1994) Plant Cell , vol.6 , pp. 907-916
    • Bureau, T.E.1    Wessler, S.R.2
  • 3
    • 0029743043 scopus 로고    scopus 로고
    • A computer-based systematic survey reveals the predominance of small inverted-repeat elements in wild-type rice genes
    • Bureau, T.E., P.C. Ronald & S.R. Wessler, 1996. A computer-based systematic survey reveals the predominance of small inverted-repeat elements in wild-type rice genes. Proc Natl Acad Sci USA 93: 8524-8529.
    • (1996) Proc Natl Acad Sci USA , vol.93 , pp. 8524-8529
    • Bureau, T.E.1    Ronald, P.C.2    Wessler, S.R.3
  • 5
    • 0032189921 scopus 로고    scopus 로고
    • Presence of miniature inverted-repeat transposable elements (MITEs) in the genome of Arabidopsis thaliana: Characterisation of the Emigrant family of elements
    • Casacuberta, E., JM., Casacuberta, P. Puigdomènech & A. Monfort, 1998. Presence of miniature inverted-repeat transposable elements (MITEs) in the genome of Arabidopsis thaliana: characterisation of the Emigrant family of elements. Plant J 16: 79-85.
    • (1998) Plant J , vol.16 , pp. 79-85
    • Casacuberta, E.1    Casacuberta, J.M.2    Puigdomènech, P.3    Monfort, A.4
  • 6
    • 0035040245 scopus 로고    scopus 로고
    • Inter-MITE polymorphisms (IMP): A high throughput transposon-based genome mapping and fingerprinting approach
    • Chang, R.Y., L.S. O'Donoughue & T.E. Bureau, 2001. Inter-MITE polymorphisms (IMP): a high throughput transposon-based genome mapping and fingerprinting approach. Theor Appl Genet 102: 773-781.
    • (2001) Theor Appl Genet , vol.102 , pp. 773-781
    • Chang, R.Y.1    O'Donoughue, L.S.2    Bureau, T.E.3
  • 7
    • 0028108183 scopus 로고
    • The evolutionary dynamics of repetitive DNA in eukaryotes
    • Charlesworth, B., P. Sniegowski & W. Stephen, 1994. The evolutionary dynamics of repetitive DNA in eukaryotes. Nature 371: 215-220.
    • (1994) Nature , vol.371 , pp. 215-220
    • Charlesworth, B.1    Sniegowski, P.2    Stephen, W.3
  • 9
    • 0003079379 scopus 로고
    • Cloning of a cDNA encoding 1-aminocyclopropane-1-carboxylate synthase and expression of its mRNA in ripening apple fruit
    • Dong, J.G., W.T. Kim, W.K. Yip, G.A. Thompson, L. Li, A.B. Bennet & S.F. Yang, 1991. Cloning of a cDNA encoding 1-aminocyclopropane-1-carboxylate synthase and expression of its mRNA in ripening apple fruit. Planta 185: 38-45.
    • (1991) Planta , vol.185 , pp. 38-45
    • Dong, J.G.1    Kim, W.T.2    Yip, W.K.3    Thompson, G.A.4    Li, L.5    Bennet, A.B.6    Yang, S.F.7
  • 10
    • 0027030615 scopus 로고
    • Transposable elements
    • Finnegan, D.J., 1992. Transposable elements. Curr Opin Genet Dev 2: 861-867.
    • (1992) Curr Opin Genet Dev , vol.2 , pp. 861-867
    • Finnegan, D.J.1
  • 11
    • 0032409406 scopus 로고    scopus 로고
    • Retrotransposon-based insertion polymorphisms for high throughput marker analysis
    • Flavell, A.J., M.R. Knox, S.R. Pearce & T.H.N. Ellis, 1998. Retrotransposon-based insertion polymorphisms for high throughput marker analysis. Plant J 16: 643-650.
    • (1998) Plant J , vol.16 , pp. 643-650
    • Flavell, A.J.1    Knox, M.R.2    Pearce, S.R.3    Ellis, T.H.N.4
  • 12
    • 0033017956 scopus 로고    scopus 로고
    • CORE-SINEs: Eukaryotic short interspersed retroposing elements with common sequence motifs
    • Gilbert, N. & D. Labuda, 1999. CORE-SINEs: Eukaryotic short interspersed retroposing elements with common sequence motifs. Proc Natl Acad Sci USA 96: 2869-2874.
    • (1999) Proc Natl Acad Sci USA , vol.96 , pp. 2869-2874
    • Gilbert, N.1    Labuda, D.2
  • 13
    • 0007695647 scopus 로고    scopus 로고
    • Genomic nucleotide sequence of a ripening-related 1-aminocyclopropane-1-carboxylate synthase gene (MdACS-1) in apple
    • Harada, T., T. Sunako, W. Sakuraba, S. Goto, S. Akada, M. Senda, R. Ishikawa & M. Niizeki, 1997. Genomic nucleotide sequence of a ripening-related 1-aminocyclopropane-1-carboxylate synthase gene (MdACS-1) in apple. Plant Physiol 113: 1465.
    • (1997) Plant Physiol , vol.113 , pp. 1465
    • Harada, T.1    Sunako, T.2    Sakuraba, W.3    Goto, S.4    Akada, S.5    Senda, M.6    Ishikawa, R.7    Niizeki, M.8
  • 14
    • 0029976603 scopus 로고    scopus 로고
    • Using CLUSTAL for multiple sequence alignments
    • Higgins, D.G., J.D. Thompson, T.J. Gibson, 1996. Using CLUSTAL for multiple sequence alignments. Met Enzymol 266: 383-402.
    • (1996) Met Enzymol , vol.266 , pp. 383-402
    • Higgins, D.G.1    Thompson, J.D.2    Gibson, T.J.3
  • 17
  • 19
    • 0033197649 scopus 로고    scopus 로고
    • Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies
    • Pearce, S.R., C. Stuart-Rogers, M.R. Knox, A. Kumar, T.H.N. Ellis & A.J. Flavell, 1999. Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies. Plant J 19: 711-717.
    • (1999) Plant J , vol.19 , pp. 711-717
    • Pearce, S.R.1    Stuart-Rogers, C.2    Knox, M.R.3    Kumar, A.4    Ellis, T.H.N.5    Flavell, A.J.6
  • 20
    • 0025272240 scopus 로고
    • Rapid and sensitive sequence comparison with FASTP and FASTA
    • Pearson, W.R., 1990. Rapid and sensitive sequence comparison with FASTP and FASTA. Met Enzymol 183: 63-98.
    • (1990) Met Enzymol , vol.183 , pp. 63-98
    • Pearson, W.R.1
  • 21
    • 0025860264 scopus 로고
    • Transient occurrence of extrachromosomal DNA of an Arabidopsis thaliana transposon-like element, Tat1
    • Peleman, J., B. Cottyn, W. Van Camp, M. Van Montagu & D. Inzé, 1991. Transient occurrence of extrachromosomal DNA of an Arabidopsis thaliana transposon-like element, Tat1. Proc Natl Acad Sci USA 88: 3618-3622.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 3618-3622
    • Peleman, J.1    Cottyn, B.2    Van Camp, W.3    Van Montagu, M.4    Inzé, D.5
  • 22
    • 0029994758 scopus 로고    scopus 로고
    • Nonautonomous inverted repeat Alien transposable elements are associated with genes of both monocotyledonous and dicotyledonous plants
    • Pozueta-Romero, J., G. Houlné & R. Schantz, 1996. Nonautonomous inverted repeat Alien transposable elements are associated with genes of both monocotyledonous and dicotyledonous plants. Gene 171: 147-153.
    • (1996) Gene , vol.171 , pp. 147-153
    • Pozueta-Romero, J.1    Houlné, G.2    Schantz, R.3
  • 23
    • 0029278746 scopus 로고
    • Transposon signatures: Species-specific molecular markers that utilize a class of multiple-copy nuclear DNA
    • Purugganan, M.D. & S.R. Wessler, 1995. Transposon signatures: species-specific molecular markers that utilize a class of multiple-copy nuclear DNA. Mol Ecol 4: 265-269.
    • (1995) Mol Ecol , vol.4 , pp. 265-269
    • Purugganan, M.D.1    Wessler, S.R.2
  • 24
    • 0028518730 scopus 로고
    • Apple beta-galactosidase: Activity against cell wall polysaccharides and characterization of a related cDNA clone
    • Ross, G.S., T. Wegrzyn, E.A. MacRae & R.J. Redgwell, 1994. Apple beta-galactosidase: Activity against cell wall polysaccharides and characterization of a related cDNA clone. Plant Physiol 106: 521-528.
    • (1994) Plant Physiol , vol.106 , pp. 521-528
    • Ross, G.S.1    Wegrzyn, T.2    MacRae, E.A.3    Redgwell, R.J.4
  • 25
    • 0034535678 scopus 로고    scopus 로고
    • Alu elements and the human genome
    • Rowold, D.J. & R.J. Herrera, 2000. Alu elements and the human genome. Genetica 108: 57-72.
    • (2000) Genetica , vol.108 , pp. 57-72
    • Rowold, D.J.1    Herrera, R.J.2
  • 27
    • 0033117331 scopus 로고    scopus 로고
    • An allele of the ripening-specific 1-aminocyclopropane-1-carboxylic acid synthase gene (ACS1) in apple fruit with a long storage life
    • Sunako, T., W. Sakuraba, M. Senda, S. Akada, R. Ishikawa, M. Niizeki & T. Harada, 1999. An allele of the ripening-specific 1-aminocyclopropane-1-carboxylic acid synthase gene (ACS1) in apple fruit with a long storage life. Plant Physiol 119: 1297-1303.
    • (1999) Plant Physiol , vol.119 , pp. 1297-1303
    • Sunako, T.1    Sakuraba, W.2    Senda, M.3    Akada, S.4    Ishikawa, R.5    Niizeki, M.6    Harada, T.7
  • 28
    • 0032996513 scopus 로고    scopus 로고
    • Characterization of repetitive DNA elements in Arabidopsis
    • Surzycki, S.A. & W.R. Belknap, 1999. Characterization of repetitive DNA elements in Arabidopsis. J Mol Evol 48: 684-691.
    • (1999) J Mol Evol , vol.48 , pp. 684-691
    • Surzycki, S.A.1    Belknap, W.R.2
  • 29
    • 0035142211 scopus 로고    scopus 로고
    • Survey of transposable elements in rice genomic sequences
    • Turcotte, K., S. Srinivasan & T. Bureau, 2001. Survey of transposable elements in rice genomic sequences. Plant J 25: 169-179.
    • (2001) Plant J , vol.25 , pp. 169-179
    • Turcotte, K.1    Srinivasan, S.2    Bureau, T.3
  • 30
    • 0029858477 scopus 로고    scopus 로고
    • Retroelements in genome organization
    • Voytas, D.F., 1996. Retroelements in genome organization. Science 274: 737-738.
    • (1996) Science , vol.274 , pp. 737-738
    • Voytas, D.F.1
  • 31
    • 0000991881 scopus 로고
    • Cloning and characterization of an apple (Malus pumila) calmodulin gene
    • Watillon, B., R. Kettmann, P. Boxus & A. Burny, 1992. Cloning and characterization of an apple (Malus pumila) calmodulin gene. Plant Sci 82: 201-212.
    • (1992) Plant Sci , vol.82 , pp. 201-212
    • Watillon, B.1    Kettmann, R.2    Boxus, P.3    Burny, A.4
  • 32
    • 0029583698 scopus 로고
    • LTR-retrotransposons and MITEs: Important players in the evolution of plant genes
    • Wessler, S.R., T.E. Bureau & S.E. White, 1995. LTR-retrotransposons and MITEs: important players in the evolution of plant genes. Curr Opin Genet Devel 5: 814-821.
    • (1995) Curr Opin Genet Devel , vol.5 , pp. 814-821
    • Wessler, S.R.1    Bureau, T.E.2    White, S.E.3
  • 33
    • 0031721660 scopus 로고    scopus 로고
    • Transposable elements associated with normal plant genes
    • Wessler, S.R., 1998. Transposable elements associated with normal plant genes. Physiol Plant 103: 581-586.
    • (1998) Physiol Plant , vol.103 , pp. 581-586
    • Wessler, S.R.1
  • 34
    • 0031747556 scopus 로고    scopus 로고
    • Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelope-like proteins
    • Wright, D.A. & D.F. Voytas, 1998. Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelope-like proteins. Genetics 149: 703-715.
    • (1998) Genetics , vol.149 , pp. 703-715
    • Wright, D.A.1    Voytas, D.F.2
  • 36
    • 0035970111 scopus 로고    scopus 로고
    • Parthenocarpic apple fruit production conferred by transposon insertion mutations in a MADS-box transcription factor
    • Yao, J.L., Y.H. Dong & B.A.M. Morris, 2001. Parthenocarpic apple fruit production conferred by transposon insertion mutations in a MADS-box transcription factor. Proc Natl Acad Sci USA 98: 1306-1311.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 1306-1311
    • Yao, J.L.1    Dong, Y.H.2    Morris, B.A.M.3
  • 37
    • 0027260466 scopus 로고
    • Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs
    • Yoshioka, Y., S. Matsumoto, S. Kojima, K. Ohshima, N. Okada & Y. Machida, 1993. Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs. Proc Natl Acad Sci USA 90: 6562-6566.
    • (1993) Proc Natl Acad Sci USA , vol.90 , pp. 6562-6566
    • Yoshioka, Y.1    Matsumoto, S.2    Kojima, S.3    Ohshima, K.4    Okada, N.5    Machida, Y.6
  • 38
    • 0033951447 scopus 로고    scopus 로고
    • Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize
    • Zhang, Q., J. Arbuckle & S.R. Wessler, 2000. Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize. Proc Natl Acad Sci USA 97: 1160-1165.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 1160-1165
    • Zhang, Q.1    Arbuckle, J.2    Wessler, S.R.3
  • 39
    • 0035940510 scopus 로고    scopus 로고
    • P instability factor: An active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases
    • Zhang, X., C. Feschotte, Q. Zhang, N. Jiang, W.B. Eggleston & S.R. Wessler, 2001. P instability factor: An active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases. Proc Natl Acad Sci USA 98: 12572-12577.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 12572-12577
    • Zhang, X.1    Feschotte, C.2    Zhang, Q.3    Jiang, N.4    Eggleston, W.B.5    Wessler, S.R.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.