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Volumn 4, Issue 4, 2003, Pages

Haplotypic analysis of the TNF locus by association efficiency and entropy

Author keywords

Additional Data File; Entropy Maximization Method; Haplotypic Diversity; Haplotypic Structure; Repulsion Phase

Indexed keywords

TUMOR NECROSIS FACTOR ALPHA;

EID: 0038175152     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2003-4-4-r24     Document Type: Article
Times cited : (59)

References (35)
  • 1
    • 0028169333 scopus 로고
    • Variation in the TNF-alpha promoter region associated with susceptibility to cerebral malaria
    • COI: 1:STN:280:DyaK2M%2FitFKkug%3D%3D
    • McGuire W, Hill AV, Allsopp CE, Greenwood BM, Kwiatkowski D: Variation in the TNF-alpha promoter region associated with susceptibility to cerebral malaria. Nature. 1994, 371: 508-510. 10.1038/371508a0. DOI: 10.1038/371508a0
    • (1994) Nature , vol.371 , pp. 508-510
    • McGuire, W.1    Hill, A.V.2    Allsopp, C.E.3    Greenwood, B.M.4    Kwiatkowski, D.5
  • 2
    • 0032958707 scopus 로고    scopus 로고
    • Severe malarial anemia and cerebral malaria are associated with different tumor necrosis factor promoter alleles
    • COI: 1:STN:280:DyaK1M%2FlvFyrtA%3D%3D
    • McGuire W, Knight JC, Hill AV, Allsopp CE, Greenwood BM, Kwiatkowski D: Severe malarial anemia and cerebral malaria are associated with different tumor necrosis factor promoter alleles. J Infect Dis. 1999, 179: 287-290. 10.1086/314533. DOI: 10.1086/314533
    • (1999) J Infect Dis , vol.179 , pp. 287-290
    • McGuire, W.1    Knight, J.C.2    Hill, A.V.3    Allsopp, C.E.4    Greenwood, B.M.5    Kwiatkowski, D.6
  • 3
    • 0032993434 scopus 로고    scopus 로고
    • A polymorphism that affects OCT-1 binding to the TNF promoter region is associated with severe malaria
    • COI: 1:CAS:528:DyaK1MXjvVelsbw%3D
    • Knight JC, Udalova I, Hill AV, Greenwood BM, Peshu N, Marsh K, Kwiatkowski D: A polymorphism that affects OCT-1 binding to the TNF promoter region is associated with severe malaria. Nat Genet. 1999, 22: 145-150. 10.1038/9649. DOI: 10.1038/9649
    • (1999) Nat Genet , vol.22 , pp. 145-150
    • Knight, J.C.1    Udalova, I.2    Hill, A.V.3    Greenwood, B.M.4    Peshu, N.5    Marsh, K.6    Kwiatkowski, D.7
  • 4
    • 0032814655 scopus 로고    scopus 로고
    • Inherited variability of tumor necrosis factor production and susceptibility to infectious disease
    • COI: 1:CAS:528:DyaK1MXltVKqtLo%3D
    • Knight JC, Kwiatkowski D: Inherited variability of tumor necrosis factor production and susceptibility to infectious disease. Proc Assoc Am Physicians. 1999, 111: 290-298. DOI: 10.1046/j.1525-1381.1999.99237.x
    • (1999) Proc Assoc Am Physicians , vol.111 , pp. 290-298
    • Knight, J.C.1    Kwiatkowski, D.2
  • 6
    • 0028832278 scopus 로고
    • Polymorphism in tumor necrosis factor genes associated with mucocutaneous leishmaniasis
    • COI: 1:CAS:528:DyaK2MXovFWru7w%3D
    • Cabrera M, Shaw MA, Sharples C, Williams H, Castes M, Convit J, Blackwell JM: Polymorphism in tumor necrosis factor genes associated with mucocutaneous leishmaniasis. J Exp Med. 1995, 182: 1259-1264. DOI: 10.1084/jem.182.5.1259
    • (1995) J Exp Med , vol.182 , pp. 1259-1264
    • Cabrera, M.1    Shaw, M.A.2    Sharples, C.3    Williams, H.4    Castes, M.5    Convit, J.6    Blackwell, J.M.7
  • 7
    • 0029815192 scopus 로고    scopus 로고
    • Variation in the tumor necrosis factor-alpha gene promoter region may be associated with death from meningococcal disease
    • COI: 1:STN:280:DyaK2s%2FgtVSqsA%3D%3D
    • Nadel S, Newport MJ, Booy R, Levin M: Variation in the tumor necrosis factor-alpha gene promoter region may be associated with death from meningococcal disease. J Infect Dis. 1996, 174: 878-880. DOI: 10.1093/infdis/174.4.878
    • (1996) J Infect Dis , vol.174 , pp. 878-880
    • Nadel, S.1    Newport, M.J.2    Booy, R.3    Levin, M.4
  • 8
    • 0031030701 scopus 로고    scopus 로고
    • Scarring trachoma is associated with polymorphism in the tumor necrosis factor alpha (TNF-alpha) gene promoter and with elevated TNF-alpha levels in tear fluid
    • COI: 1:CAS:528:DyaK2sXhtlOjt7k%3D
    • Conway DJ, Holland MJ, Bailey RL, Campbell AE, Mahdi OS, Jennings R, Mbena E, Mabey DC: Scarring trachoma is associated with polymorphism in the tumor necrosis factor alpha (TNF-alpha) gene promoter and with elevated TNF-alpha levels in tear fluid. Infect Immun. 1997, 65: 1003-1006. DOI: 10.1128/iai.65.3.1003-1006.1997
    • (1997) Infect Immun , vol.65 , pp. 1003-1006
    • Conway, D.J.1    Holland, M.J.2    Bailey, R.L.3    Campbell, A.E.4    Mahdi, O.S.5    Jennings, R.6    Mbena, E.7    Mabey, D.C.8
  • 9
    • 0030942229 scopus 로고    scopus 로고
    • Tumour necrosis factor haplotypes and asthma
    • COI: 1:CAS:528:DyaK2sXisFOmtb8%3D
    • Moffatt MF, Cookson WO: Tumour necrosis factor haplotypes and asthma. Hum Mol Genet. 1997, 6: 551-554. 10.1093/hmg/6.4.551. DOI: 10.1093/hmg/6.4.551
    • (1997) Hum Mol Genet , vol.6 , pp. 551-554
    • Moffatt, M.F.1    Cookson, W.O.2
  • 11
    • 0032717296 scopus 로고    scopus 로고
    • Crohn's disease is associated with novel polymorphisms in the 53-flanking region of the tumor necrosis factor gene
    • COI: 1:CAS:528:DyaK1MXnsVCqsbs%3D
    • Negoro K, Kinouchi Y, Hiwatashi N, Takahashi S, Takagi S, Satoh J, Shimosegawa T, Toyota T: Crohn's disease is associated with novel polymorphisms in the 53-flanking region of the tumor necrosis factor gene. Gastroenterology. 1999, 117: 1062-1068. DOI: 10.1016/S0016-5085(99)70390-2
    • (1999) Gastroenterology , vol.117 , pp. 1062-1068
    • Negoro, K.1    Kinouchi, Y.2    Hiwatashi, N.3    Takahashi, S.4    Takagi, S.5    Satoh, J.6    Shimosegawa, T.7    Toyota, T.8
  • 12
    • 0034459681 scopus 로고    scopus 로고
    • Functional consequences of a polymorphism affecting NF-kappaB p50-p50 binding to the TNF promoter region
    • COI: 1:CAS:528:DC%2BD3MXivVamuro%3D
    • Udalova IA, Richardson A, Denys A, Smith C, Ackerman H, Foxwell B, Kwiatkowski D: Functional consequences of a polymorphism affecting NF-kappaB p50-p50 binding to the TNF promoter region. Mol Cell Biol. 2000, 20: 9113-9119. 10.1128/MCB.20.24.9113-9119.2000. DOI: 10.1128/MCB.20.24.9113-9119.2000
    • (2000) Mol Cell Biol , vol.20 , pp. 9113-9119
    • Udalova, I.A.1    Richardson, A.2    Denys, A.3    Smith, C.4    Ackerman, H.5    Foxwell, B.6    Kwiatkowski, D.7
  • 17
    • 0033940849 scopus 로고    scopus 로고
    • Recombinational and mutational hotspots within the human lipoprotein lipase gene
    • COI: 1:CAS:528:DC%2BD3cXhtVWks7s%3D
    • Templeton AR, Clark AG, Weiss KM, Nickerson DA, Boerwinkle E, Sing CF: Recombinational and mutational hotspots within the human lipoprotein lipase gene. Am J Hum Genet. 2000, 66: 69-83. 10.1086/302699. DOI: 10.1086/302699
    • (2000) Am J Hum Genet , vol.66 , pp. 69-83
    • Templeton, A.R.1    Clark, A.G.2    Weiss, K.M.3    Nickerson, D.A.4    Boerwinkle, E.5    Sing, C.F.6
  • 18
    • 0023915850 scopus 로고
    • The detection of linkage disequilibrium between closely linked markers: RFLPs at the AI-CIII apolipoprotein genes
    • COI: 1:STN:280:DyaL1c7gtlGnsA%3D%3D, PID: 2892394
    • Thompson EA, Deeb S, Walker D, Motulsky AG: The detection of linkage disequilibrium between closely linked markers: RFLPs at the AI-CIII apolipoprotein genes. Am J Hum Genet. 1988, 42: 113-124.
    • (1988) Am J Hum Genet , vol.42 , pp. 113-124
    • Thompson, E.A.1    Deeb, S.2    Walker, D.3    Motulsky, A.G.4
  • 19
    • 0031588662 scopus 로고    scopus 로고
    • Genetic analysis of complex diseases
    • COI: 1:STN:280:DyaK2s3htFKhsg%3D%3D, PID: 9064791
    • Muller-Myhsok B, Abel L: Genetic analysis of complex diseases. Science. 1997, 275: 1328-1330.
    • (1997) Science , vol.275 , pp. 1328-1330
    • Muller-Myhsok, B.1    Abel, L.2
  • 21
    • 0034791035 scopus 로고    scopus 로고
    • High-resolution haplotype structure in the human genome
    • COI: 1:CAS:528:DC%2BD3MXnsFKns78%3D
    • Daly MJ, Rioux JD, Schaffner SF, Hudson TJ, Lander ES: High-resolution haplotype structure in the human genome. Nat Genet. 2001, 29: 229-232. 10.1038/ng1001-229. DOI: 10.1038/ng1001-229
    • (2001) Nat Genet , vol.29 , pp. 229-232
    • Daly, M.J.1    Rioux, J.D.2    Schaffner, S.F.3    Hudson, T.J.4    Lander, E.S.5
  • 23
    • 0037188541 scopus 로고    scopus 로고
    • A dynamic programming algorithm for haplotype block partitioning
    • COI: 1:CAS:528:DC%2BD38XktlCkt7o%3D
    • Zhang K, Deng M, Chen T, Waterman MS, Sun F: A dynamic programming algorithm for haplotype block partitioning. Proc Natl Acad Sci USA. 2002, 99: 7335-7339. 10.1073/pnas.102186799. DOI: 10.1073/pnas.102186799
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 7335-7339
    • Zhang, K.1    Deng, M.2    Chen, T.3    Waterman, M.S.4    Sun, F.5
  • 24
    • 0035071957 scopus 로고    scopus 로고
    • A new statistical method for haplotype reconstruction from population data
    • COI: 1:STN:280:DC%2BD3M3kslWgsA%3D%3D
    • Stephens M, Smith NJ, Donnelly P: A new statistical method for haplotype reconstruction from population data. Am J Hum Genet. 2001, 68: 978-989. 10.1086/319501. DOI: 10.1086/319501
    • (2001) Am J Hum Genet , vol.68 , pp. 978-989
    • Stephens, M.1    Smith, N.J.2    Donnelly, P.3
  • 26
  • 27
    • 0015990369 scopus 로고
    • Sampling variances of heterozygosity and genetic distance
    • COI: 1:STN:280:DyaE2c7ktlCiuw%3D%3D
    • Nei M, Roychoudhury AK: Sampling variances of heterozygosity and genetic distance. Genetics. 1974, 76: 379-390. DOI: 10.1093/genetics/76.2.379
    • (1974) Genetics , vol.76 , pp. 379-390
    • Nei, M.1    Roychoudhury, A.K.2
  • 29
    • 85118715093 scopus 로고    scopus 로고
    • Arlequin. [http://lgb.unige.ch/arlequin/]
    • Arlequin
  • 31
    • 0001771498 scopus 로고
    • Evolution in Mendelian populations
    • COI: 1:STN:280:DC%2BD2s%2FmsVGqsw%3D%3D
    • Wright S: Evolution in Mendelian populations. Genetics. 1931, 16: 97-159. DOI: 10.1093/genetics/16.2.97
    • (1931) Genetics , vol.16 , pp. 97-159
    • Wright, S.1
  • 32
    • 0029048325 scopus 로고
    • Testing heterozygote excess and deficiency
    • COI: 1:STN:280:DyaK287itVemtA%3D%3D
    • Rousset F, Raymond M: Testing heterozygote excess and deficiency. Genetics. 1995, 140: 1413-1419. DOI: 10.1093/genetics/140.4.1413
    • (1995) Genetics , vol.140 , pp. 1413-1419
    • Rousset, F.1    Raymond, M.2
  • 33
    • 0002907949 scopus 로고
    • The interaction of selection and linkage. I. General considerations; heterotic models
    • COI: 1:STN:280:DC%2BD2s%2Fms1Wksg%3D%3D
    • Lewontin R: The interaction of selection and linkage. I. General considerations; heterotic models. Genetics. 1964, 49: 49-67. DOI: 10.1093/genetics/49.1.49
    • (1964) Genetics , vol.49 , pp. 49-67
    • Lewontin, R.1
  • 35


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.