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Volumn 8, Issue 3, 2003, Pages 252-258

Clinical application of cDNA microarrays in oncology

Author keywords

Microarrays; Predictive tests; Prognostic markers; Transcriptional profiling

Indexed keywords

COMPLEMENTARY DNA;

EID: 0038021562     PISSN: 10837159     EISSN: None     Source Type: Journal    
DOI: 10.1634/theoncologist.8-3-252     Document Type: Review
Times cited : (58)

References (33)
  • 1
    • 0035861047 scopus 로고    scopus 로고
    • Gene expression profile analysis by DNA microarrays: Promise and pitfalls
    • King HC, Sinha AA. Gene expression profile analysis by DNA microarrays: Promise and pitfalls. JAMA 2001;286:2280-2288.
    • (2001) JAMA , vol.286 , pp. 2280-2288
    • King, H.C.1    Sinha, A.A.2
  • 2
    • 0035895505 scopus 로고    scopus 로고
    • The sequence of the human genome
    • Venter JC, Adams MD, Myers EW et al. The sequence of the human genome. Science 2001;291:1304-1351.
    • (2001) Science , vol.291 , pp. 1304-1351
    • Venter, J.C.1    Adams, M.D.2    Myers, E.W.3
  • 3
    • 0033569406 scopus 로고    scopus 로고
    • Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
    • Golub TR, Slonim DK, Tamayo P et al Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. Science 1999;286:531-537.
    • (1999) Science , vol.286 , pp. 531-537
    • Golub, T.R.1    Slonim, D.K.2    Tamayo, P.3
  • 4
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • Eisen MB, Spellman PT, Brown PO et al. Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA 1998;95:14863-14868.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 14863-14868
    • Eisen, M.B.1    Spellman, P.T.2    Brown, P.O.3
  • 5
    • 0033518873 scopus 로고    scopus 로고
    • Searching for evidence of altered gene expression: A comment on statistical analysis of microarray data
    • Wittes J, Friedman HP. Searching for evidence of altered gene expression: a comment on statistical analysis of microarray data. J Natl Cancer Inst 1999;91:400-401.
    • (1999) J Natl Cancer Inst , vol.91 , pp. 400-401
    • Wittes, J.1    Friedman, H.P.2
  • 6
    • 0035687492 scopus 로고    scopus 로고
    • Identifying differentially expressed genes in cDNA microarray experiments
    • Baggerly KA, Coombes KR, Hess KR et al. Identifying differentially expressed genes in cDNA microarray experiments. J Comput Biol 2001;8:639-659.
    • (2001) J Comput Biol , vol.8 , pp. 639-659
    • Baggerly, K.A.1    Coombes, K.R.2    Hess, K.R.3
  • 7
    • 0036738906 scopus 로고    scopus 로고
    • Determination of minimum sample size and discriminatory expression patterns in microarray data
    • Hwang D, Schmitt WA, Stephanopoulos G et al. Determination of minimum sample size and discriminatory expression patterns in microarray data. Bioinformatics 2002;18:1184-1193.
    • (2002) Bioinformatics , vol.18 , pp. 1184-1193
    • Hwang, D.1    Schmitt, W.A.2    Stephanopoulos, G.3
  • 8
    • 0038237368 scopus 로고    scopus 로고
    • Estimating data set size requirements for classifying DNA microarray data
    • in press
    • Mukherjee S, Tamayo P, Rogers S et al. Estimating data set size requirements for classifying DNA microarray data. J Comput Biol 2003 (in press).
    • (2003) J Comput Biol
    • Mukherjee, S.1    Tamayo, P.2    Rogers, S.3
  • 9
    • 0035868668 scopus 로고    scopus 로고
    • 2000 Update of recommendations for the use of tumor markers in breast and colorectal cancer: Clinical practice guidelines of the American Society of Clinical Oncology
    • Bast RC Jr, Ravdin P, Hayes DF et al. 2000 update of recommendations for the use of tumor markers in breast and colorectal cancer: clinical practice guidelines of the American Society of Clinical Oncology. J Clin Oncol 2001;19:1865-1878.
    • (2001) J Clin Oncol , vol.19 , pp. 1865-1878
    • Bast R.C., Jr.1    Ravdin, P.2    Hayes, D.F.3
  • 10
    • 0034614637 scopus 로고    scopus 로고
    • The hallmarks of cancer
    • Hanahan D, Weinberg RA. The hallmarks of cancer. Cell 2000;100:57-70.
    • (2000) Cell , vol.100 , pp. 57-70
    • Hanahan, D.1    Weinberg, R.A.2
  • 11
    • 0034680102 scopus 로고    scopus 로고
    • Molecular portraits of human breast tumours
    • Perou CM, Sorlie T, Eisen MB et al. Molecular portraits of human breast tumours. Nature 2000;406:747-752.
    • (2000) Nature , vol.406 , pp. 747-752
    • Perou, C.M.1    Sorlie, T.2    Eisen, M.B.3
  • 12
    • 12444326150 scopus 로고    scopus 로고
    • Gene expression profiles obtained from single passage fine needle aspirations (FNA) of breast cancer reliably identify prognostic/predictive markers such as estrogen (ER) and HER-2 receptor status and reveal large scale molecular differences between ER-negative and ER-positive tumors
    • in press
    • Pusztai L, Ayers M, Stec J et al. Gene expression profiles obtained from single passage fine needle aspirations (FNA) of breast cancer reliably identify prognostic/predictive markers such as estrogen (ER) and HER-2 receptor status and reveal large scale molecular differences between ER-negative and ER-positive tumors. Clin Cancer Res 2003 (in press).
    • (2003) Clin Cancer Res
    • Pusztai, L.1    Ayers, M.2    Stec, J.3
  • 13
    • 0035881617 scopus 로고    scopus 로고
    • Estrogen receptor status in breast cancer is associated with remarkably distinct gene expression patterns
    • Gruvberger S, Ringner M, Chen Y et al Estrogen receptor status in breast cancer is associated with remarkably distinct gene expression patterns. Cancer Res 2001;61:5979-5984.
    • (2001) Cancer Res , vol.61 , pp. 5979-5984
    • Gruvberger, S.1    Ringner, M.2    Chen, Y.3
  • 14
    • 0035931947 scopus 로고    scopus 로고
    • Gene-expression profiles in hereditary breast cancer
    • Hedenfalk I, Duggan D, Chen Y et al. Gene-expression profiles in hereditary breast cancer. N Engl J Med 2001;344:539-548.
    • (2001) N Engl J Med , vol.344 , pp. 539-548
    • Hedenfalk, I.1    Duggan, D.2    Chen, Y.3
  • 15
    • 0034598746 scopus 로고    scopus 로고
    • Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
    • Alizadeh AA, Eisen MB, Davis RE et al. Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature 2000;403:503-511.
    • (2000) Nature , vol.403 , pp. 503-511
    • Alizadeh, A.A.1    Eisen, M.B.2    Davis, R.E.3
  • 16
    • 0037142053 scopus 로고    scopus 로고
    • The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma
    • Rosenwald A, Wright G, Chan WC et al. The use of molecular profiling to predict survival after chemotherapy for diffuse large-B-cell lymphoma. N Engl J Med 2002;346:1937-1947.
    • (2002) N Engl J Med , vol.346 , pp. 1937-1947
    • Rosenwald, A.1    Wright, G.2    Chan, W.C.3
  • 17
    • 0037070754 scopus 로고    scopus 로고
    • Molecular characterisation of soft tissue tumours: A gene expression study
    • Nielsen TO, West RB, Linn SC et al. Molecular characterisation of soft tissue tumours: a gene expression study. Lancet 2002;359:1301-1307.
    • (2002) Lancet , vol.359 , pp. 1301-1307
    • Nielsen, T.O.1    West, R.B.2    Linn, S.C.3
  • 18
    • 0037165140 scopus 로고    scopus 로고
    • Prediction of central nervous system embryonal tumour outcome based on gene expression
    • Pomeroy SL, Tamayo P, Gaasenbeek M et al. Prediction of central nervous system embryonal tumour outcome based on gene expression. Nature 2002;415:436-442.
    • (2002) Nature , vol.415 , pp. 436-442
    • Pomeroy, S.L.1    Tamayo, P.2    Gaasenbeek, M.3
  • 19
    • 18244409687 scopus 로고    scopus 로고
    • Gene expression profiling predicts clinical outcome of breast cancer
    • van't Veer LJ, Dai H, van de Vijver MJ et al. Gene expression profiling predicts clinical outcome of breast cancer. Nature 2002;415:530-536.
    • (2002) Nature , vol.415 , pp. 530-536
    • Van't Veer, L.J.1    Dai, H.2    Van de Vijver, M.J.3
  • 20
    • 0037137519 scopus 로고    scopus 로고
    • A gene-expression signature as a predictor of survival in breast cancer
    • van de Vijver MJ, He YD, van't Veer LJ et al. A gene-expression signature as a predictor of survival in breast cancer. N Engl J Med 2002;347:1999-2009.
    • (2002) N Engl J Med , vol.347 , pp. 1999-2009
    • Van de Vijver, M.J.1    He, Y.D.2    Van't Veer, L.J.3
  • 21
    • 0035859883 scopus 로고    scopus 로고
    • Gene expression profiling of clear cell renal cell carcinoma: Gene identification and prognostic classification
    • Takahashi M, Rhodes DR, Furge KA et al. Gene expression profiling of clear cell renal cell carcinoma: gene identification and prognostic classification. Proc Natl Acad Sci USA 2001;98:9754-9759.
    • (2001) Proc Natl Acad Sci USA , vol.98 , pp. 9754-9759
    • Takahashi, M.1    Rhodes, D.R.2    Furge, K.A.3
  • 22
    • 18544365698 scopus 로고    scopus 로고
    • Gene-expression profiles predict survival of patients with lung adenocarcinoma
    • Beer DG, Kardia SL, Huang CC et al. Gene-expression profiles predict survival of patients with lung adenocarcinoma. Nat Med 2002;8:816-824.
    • (2002) Nat Med , vol.8 , pp. 816-824
    • Beer, D.G.1    Kardia, S.L.2    Huang, C.C.3
  • 23
    • 0037045589 scopus 로고    scopus 로고
    • Relation between resistance of Philadelphia-chromosome-positive acute lymphoblastic leukaemia to the tyrosine kinase inhibitor ST1571 and gene-expression profiles: A gene-expression study
    • Hofmann WK, de Vos S, Elashoff D et al. Relation between resistance of Philadelphia-chromosome-positive acute lymphoblastic leukaemia to the tyrosine kinase inhibitor ST1571 and gene-expression profiles: a gene-expression study. The Lancet 2002;359:481-486.
    • (2002) The Lancet , vol.359 , pp. 481-486
    • Hofmann, W.K.1    De Vos, S.2    Elashoff, D.3
  • 25
    • 0038555008 scopus 로고    scopus 로고
    • Gene expression profiling of fine needle aspirations of breast cancer identifies genes associated with complete pathologic response to neoadjuvant Taxol/FAC chemotherapy
    • Ayers M, Symmans WF, Stec J et al. Gene expression profiling of fine needle aspirations of breast cancer identifies genes associated with complete pathologic response to neoadjuvant Taxol/FAC chemotherapy. Breast Cancer Res Treat 2002;76(suppl 1):64a.
    • (2002) Breast Cancer Res Treat , vol.76 , Issue.SUPPL. 1
    • Ayers, M.1    Symmans, W.F.2    Stec, J.3
  • 26
    • 4243661335 scopus 로고    scopus 로고
    • Utilization of gene expression profiling to identify markers of disease recurrence in node-negative breast cancer
    • Roche PC, Mertens ML, Couch FJ et al. Utilization of gene expression profiling to identify markers of disease recurrence in node-negative breast cancer. Breast Cancer Res Treat 2001;69:213a.
    • (2001) Breast Cancer Res Treat , vol.69
    • Roche, P.C.1    Mertens, M.L.2    Couch, F.J.3
  • 27
    • 0033511609 scopus 로고    scopus 로고
    • The lymphochip: A specialized cDNA microarray for the genomic-scale analysis of gene expression in normal and malignant lymphocytes
    • Alizadeh A, Eisen M, Davis RE et al. The lymphochip: a specialized cDNA microarray for the genomic-scale analysis of gene expression in normal and malignant lymphocytes. Cold Spring Harb Symp Quant Biol 1999;64:71-78.
    • (1999) Cold Spring Harb Symp Quant Biol , vol.64 , pp. 71-78
    • Alizadeh, A.1    Eisen, M.2    Davis, R.E.3
  • 28
    • 0038555010 scopus 로고    scopus 로고
    • Fine needle aspiration and core needle biopsy samples of breast cancer provide similar total RNA yield, but different stromal gene expression profiles
    • in press
    • Symmans WF, Ayers M, Clark E et al. Fine needle aspiration and core needle biopsy samples of breast cancer provide similar total RNA yield, but different stromal gene expression profiles. Cancer 2003 (in press).
    • (2003) Cancer
    • Symmans, W.F.1    Ayers, M.2    Clark, E.3
  • 29
    • 0032412988 scopus 로고    scopus 로고
    • Assessing the clinical impact of prognostic factors: When is "statistically significant" clinically useful?
    • Hayes DF, Trock B, Harris AL. Assessing the clinical impact of prognostic factors: when is "statistically significant" clinically useful? Breast Cancer Res Treat 1998;52:305-319.
    • (1998) Breast Cancer Res Treat , vol.52 , pp. 305-319
    • Hayes, D.F.1    Trock, B.2    Harris, A.L.3
  • 30
    • 0035865296 scopus 로고    scopus 로고
    • Understanding the utility of adjuvant systemic therapy for primary breast cancer
    • Loprinzi CL, Thome SD. Understanding the utility of adjuvant systemic therapy for primary breast cancer. J Clin Oncol 2001;19:972-979.
    • (2001) J Clin Oncol , vol.19 , pp. 972-979
    • Loprinzi, C.L.1    Thome, S.D.2
  • 31
    • 0031941706 scopus 로고    scopus 로고
    • Survey of breast cancer patients concerning their knowledge and expectations of adjuvant therapy
    • Ravdin PM, Siminoff IA, Harvey JA. Survey of breast cancer patients concerning their knowledge and expectations of adjuvant therapy. J Clin Oncol 1998;16:515-521.
    • (1998) J Clin Oncol , vol.16 , pp. 515-521
    • Ravdin, P.M.1    Siminoff, I.A.2    Harvey, J.A.3
  • 33
    • 0037540750 scopus 로고    scopus 로고
    • Available at: http://consensus.nih.gov/cons/114/114_intro.htm


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.