Close identity of a pressure-stabilized intermediate with a kinetic intermediate in protein folding

Proceedings of the National Academy of Sciences of the United States of America

Volumn 100, Issue 6, 2003, Pages 3167-3172

  Kitahara, Ryo ^a,c   Akasaka, Kazuyuki ^b  

^a KOBE UNIVERSITY   (Japan)

^b KINKI UNIVERSITY   (Japan)

^c RIKEN HARIMA INSTITUTE   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN; UBIQUITIN;

AMINO ACID SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; HYPERBARISM; ION EXCHANGE; KINETICS; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRESSURE; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN SECONDARY STRUCTURE; PROTEIN STABILITY; PROTEIN STRUCTURE; STRUCTURE ANALYSIS;

DEUTERIUM; DRUG STABILITY; HYDROGEN; KINETICS; MODELS, MOLECULAR; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PRESSURE; PROTEIN CONFORMATION; PROTEIN FOLDING; THERMODYNAMICS; UBIQUITIN;

EID: 0037452877     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0630309100     Document Type: Article

References (31)

1. Vijay-Kumar, S., Bugg, C. E. & Cook, W. J. (1998) in The Ubiquitin System, eds. Schlesinger, M. & Hershko, A. (Cold Spring Harbor Lab. Press, Plainview, NY).
2. Vijay-Kumar, S., Bugg, C. E. & Cook, W. J. (1987) J. Mol. Biol. 194, 531-544.
3. Weber, P. L., Brown, S. C. & Mueller, L. (1987) Biochemistry 26, 7282-7290.
4. Schneider, D. M., Dellwo, M. J. & Wand, A. J. (1992) Biochemistry 31, 3645-3652.
5. Cornilescu, G., Marquardt, J. L., Ottiger, M. & Bax, A. (1998) J. Am. Chem. Soc. 120, 6836-6837.
6. Hochstrasser, M. (2000) Science 289, 563-564.
7. Kitahara, R., Yamada, H. & Akasaka, K. (2001) Biochemistry 40, 13556-13563.
8. Kitahara, R., Yamada, H., Akasaka, K. & Wright, P. E. (2002) J. Mol. Biol. 320, 311-319.
9. Briggs, M. S. & Roder, H. (1992) Proc. Natl. Acad. Sci. USA 89, 2017-2021.
10. Akasaka, K. & Yamada, H. (2001) Methods Enzymol. 338, 134-158.
11. Yamada, H., Nishikawa, K., Honda, M., Shimura, T., Akasaka, K. & Tabayashi, K. (2001) Rev. Sci. Instrum. 72, 1463-1471.
12. Bodenhausen, G. & Ruben, D. J. (1980) Chem. Phys. Lett. 69, 185-189.
13. Sklenar, V., Piotto, M., Leppick, R. & Saudek, V. (1993) J. Magn. Reson. 102, A241-A245.
14. Chalikian, T. V. & Breslauer, K. J. (1996) Biopolymers 39, 619-626.
15. Ibarra-Molero, B., Loladze, V. V., Makhatadze, G. I. & Sanchez-Ruiz, J. M. (1999) Biochemistry 38, 8138-8149.
16. Nicholls, A., Sharp, K. A. & Honig, B. (1991) Proteins 11, 281-296.
17. Inoue, K., Yamada, H., Akasaka, K. Herrmann, C., Kremer, W., Maurer, T., Döker, R. & Kalbitzer, H. R. (2000) Nat. Struct. Biol. 7, 547-550.
18. Kuwata, K., Li, H., Yamada, H., Batt, C. A., Goto, Y. & Akasaka, K. (2001) J. Mol. Biol. 305, 1073-1083.
19. Kuwata, K., Li, H., Yamada, H., Legname, G., Prusiner, S. B., Akasaka, K. & James, T. L. (2002) Biochemistry 41, 12277-12283.
20. Kitahara, R., Royer, C., Yamada, H., Boyer, M., Saldana, J. L., Akasaka, K. & Roumestand, C. (2002) J. Mol. Biol. 329, 609-628.
21. Miura, T., Klaus, W., Gsell, B., Miyamoto, C. & Senn, H. (1999) J. Mol. Biol. 290, 213-228.
22. VanDemark, A. P., Hofmann, R. M., Tsui, C., Pickart, C. M. & Wolberger, C. (2001) Cell 105, 711-720.
23. Onuchic, J. N., Luthey-Schulten, Z. & Wolynes, P. G. (1997) Annu. Rev. Phys. Chem. 48, 545-600.
24. Nakamura, H. K. & Sasai, M. (2001) Proteins 43, 280-291.
25. Frauenfelder, H., Alberding, N. A., Ansari, A., Braunstein, D., Cowen, B. R., Hong, M. K., Iben, I. E. T., Johnson, J. B., Luck, S., Marden, M. C., et al. (1990) J. Phys. Chem. 94, 1024-1037.
26. Li, H., Yamada, H. & Akasaka, K. (1998) Biochemistry 37, 1167-1173.
27. Akasaka, K. & Li, H. (2001) Biochemisty 40, 8665-8671.
28. Li, R. & Woodward, C. (1999) Protein Sci. 8, 1571-1590.
29. Barbar, E., Hare, M., Makokha, M., Barany, G. & Woodward, C. (2001) Biochemistry 40, 9734-9742.
30. Wang, A. C., Grzesiek, S., Tschudin, R., Lodi, P. J. & Bax, A. (1995) J. Biomol. NMR 5, 376-382.
31. Bridgman, P. W. (1912) Proc. Am. Acad. Arts Sci. 47, 441-558.