-
1
-
-
0016914760
-
-
Meister, A., Ed., Wiley, New York
-
Fruton, J. S. (1976) in Advances in Enzymology (Meister, A., Ed.) Vol. 44, pp 1-36, Wiley, New York.
-
(1976)
Advances in Enzymology
, vol.44
, pp. 1-36
-
-
Fruton, J.S.1
-
2
-
-
0025225682
-
-
Swain, A. L., Miller, M. M., Green, J., Rich, D. H., Schneider, J., Kent, S. B. H., and Wlodawer, A. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 8805-8809.
-
(1990)
Proc. Natl. Acad. Sci. U.S.A.
, vol.87
, pp. 8805-8809
-
-
Swain, A.L.1
Miller, M.M.2
Green, J.3
Rich, D.H.4
Schneider, J.5
Kent, S.B.H.6
Wlodawer, A.7
-
3
-
-
0025829331
-
-
Jaskolski, M., Tomasselli, A. G., Sawyer, T. K., Staples, D. G., Heinrikson, R. I., Schneider, J. S., Kent, S. B. H., and Wlodawer, A. (1991) Biochemistry 30, 1600-1609.
-
(1991)
Biochemistry
, vol.30
, pp. 1600-1609
-
-
Jaskolski, M.1
Tomasselli, A.G.2
Sawyer, T.K.3
Staples, D.G.4
Heinrikson, R.I.5
Schneider, J.S.6
Kent, S.B.H.7
Wlodawer, A.8
-
4
-
-
0026325601
-
-
Ido, E., Han, H. P., Kezdy, F. J., and Tang, J. (1991) J. Biol. Chem. 266, 24359-24366.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 24359-24366
-
-
Ido, E.1
Han, H.P.2
Kezdy, F.J.3
Tang, J.4
-
5
-
-
0027525478
-
-
Rodrigues, E. J., Angeles, T. S., and Meek, T. D. (1993) Biochemistry 32, 12380-12385.
-
(1993)
Biochemistry
, vol.32
, pp. 12380-12385
-
-
Rodrigues, E.J.1
Angeles, T.S.2
Meek, T.D.3
-
7
-
-
0030598997
-
-
Liu, H., Florian, M.-P., and van Gunsteren, W. F. (1996) J. Mol. Biol. 261, 454-469.
-
(1996)
J. Mol. Biol.
, vol.261
, pp. 454-469
-
-
Liu, H.1
Florian, M.-P.2
Van Gunsteren, W.F.3
-
8
-
-
0033628818
-
-
Guldnik, S., Erickson, J. W., and Xie, D. (2000) Vitam. Horm. 58, 213-256.
-
(2000)
Vitam. Horm.
, vol.58
, pp. 213-256
-
-
Guldnik, S.1
Erickson, J.W.2
Xie, D.3
-
13
-
-
0023268502
-
-
Fischl, M. A., Richman, D. D., Grieco, M. H., et al. (1987) N. Engl. J. Med. 317, 185-197.
-
(1987)
N. Engl. J. Med.
, vol.317
, pp. 185-197
-
-
Fischl, M.A.1
Richman, D.D.2
Grieco, M.H.3
-
14
-
-
0028126771
-
-
Craig, J. C., Whittaker, L., Duncan, I. B., and Roberts, N. (1994) Antiviral Chem. Chemother. 5, 380-386.
-
(1994)
Antiviral Chem. Chemother.
, vol.5
, pp. 380-386
-
-
Craig, J.C.1
Whittaker, L.2
Duncan, I.B.3
Roberts, N.4
-
15
-
-
0030869269
-
-
Gulick, R., Mellors, J., Havlir, D., Eron, J., Gonzales, C., McMahon, D., Richman, D., Valentine, F., Jonas, L., Meibohm, A., Emini, E., and Chodakewitz, J. (1997) N. Engl. J. Med. 337, 734-739.
-
(1997)
N. Engl. J. Med.
, vol.337
, pp. 734-739
-
-
Gulick, R.1
Mellors, J.2
Havlir, D.3
Eron, J.4
Gonzales, C.5
McMahon, D.6
Richman, D.7
Valentine, F.8
Jonas, L.9
Meibohm, A.10
Emini, E.11
Chodakewitz, J.12
-
16
-
-
0030868897
-
-
Autran, B., Carcelain, G., Li, T. S., Blanc, C., Mathez, D., Tubiana, R., Katalaba, C., Debre, P., and Leibowitch, J. (1998) Science 277, 112-116.
-
(1998)
Science
, vol.277
, pp. 112-116
-
-
Autran, B.1
Carcelain, G.2
Li, T.S.3
Blanc, C.4
Mathez, D.5
Tubiana, R.6
Katalaba, C.7
Debre, P.8
Leibowitch, J.9
-
17
-
-
0029102730
-
-
Takahashi, K., Ed., Plenum Press, New York
-
Collins, J. R., Burt, S. K., and Erickson, J. W. (1995) in Aspartic Proteinases: Structure, Function, Biology, and Biomedical Implications (Takahashi, K., Ed.) pp 455-460, Plenum Press, New York.
-
(1995)
Aspartic Proteinases: Structure, Function, Biology, and Biomedical Implications
, pp. 455-460
-
-
Collins, J.R.1
Burt, S.K.2
Erickson, J.W.3
-
18
-
-
0033200247
-
-
Ishima, R., Freedberg, D. I., Wang, Y. X., Louis, J. M., and Torchia, D. A. (1999) Struct. Folding Des. 7, 1047-1055.
-
(1999)
Struct. Folding Des.
, vol.7
, pp. 1047-1055
-
-
Ishima, R.1
Freedberg, D.I.2
Wang, Y.X.3
Louis, J.M.4
Torchia, D.A.5
-
19
-
-
0027244713
-
-
Friedman, S. H., Decamp, D. L., Sijbesma, R. P., Srdanov, G., Wudl, F., and Kenyon, G. L. (1993) J. Am. Chem. Soc. 115, 6506-6509.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 6506-6509
-
-
Friedman, S.H.1
Decamp, D.L.2
Sijbesma, R.P.3
Srdanov, G.4
Wudl, F.5
Kenyon, G.L.6
-
20
-
-
0027199656
-
-
Sijbesma, R., Srdanov, G., Wudl, F., Castoro, J. A., Wilkins, C., Friedman, S. H., DeCamp, D. L., and Kenyon, G. L. (1993) J. Am. Chem. Soc. 115, 6510-6512.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 6510-6512
-
-
Sijbesma, R.1
Srdanov, G.2
Wudl, F.3
Castoro, J.A.4
Wilkins, C.5
Friedman, S.H.6
DeCamp, D.L.7
Kenyon, G.L.8
-
21
-
-
0027255192
-
-
Schinazi, R. F., Sijbesma, R., Srdanov, G., Hill, C. I., and Wudl, F. (1993) Antimicrob. Agents Chemother. 37, 1707-1710.
-
(1993)
Antimicrob. Agents Chemother.
, vol.37
, pp. 1707-1710
-
-
Schinazi, R.F.1
Sijbesma, R.2
Srdanov, G.3
Hill, C.I.4
Wudl, F.5
-
22
-
-
0029931172
-
-
Schuster, D. I., Wilson, S. R., and Schinazi, R. F. (1996) Bioorg. Med. Chem. Lett. 6 1253-1256.
-
(1996)
Bioorg. Med. Chem. Lett.
, vol.6
, pp. 1253-1256
-
-
Schuster, D.I.1
Wilson, S.R.2
Schinazi, R.F.3
-
23
-
-
0032543623
-
-
Friedman, S. H., Ganapathi, P. S., Rubin, Y., and Kenyon, G. L. (1998) J. Med. Chem. 41, 2424-2429.
-
(1998)
J. Med. Chem.
, vol.41
, pp. 2424-2429
-
-
Friedman, S.H.1
Ganapathi, P.S.2
Rubin, Y.3
Kenyon, G.L.4
-
24
-
-
0013093851
-
-
U.S. Patent 5,811,460
-
Friedman, S. H., Schinazi, R. F., Wudl, F., Hill, C. I., DeCamp, D. L., Sijbesma, R., and Kenyon, G. L. (1998) U.S. Patent 5,811,460.
-
-
-
Friedman, S.H.1
Schinazi, R.F.2
Wudl, F.3
Hill, C.I.4
DeCamp, D.L.5
Sijbesma, R.6
Kenyon, G.L.7
-
25
-
-
0013047920
-
-
Schuster, D. I., Wilson, S. R., Kirschner, A. N., Schinazi, R. F., Schleuter-Wirtz, S., Tharnish, P., Barnett, T., Ermolieff, J., Tang, J., Brettreich, M., and Hirsch, A. (2000) Proc. Electrochem. Soc. 11, 267-270.
-
(2000)
Proc. Electrochem. Soc.
, vol.11
, pp. 267-270
-
-
Schuster, D.I.1
Wilson, S.R.2
Kirschner, A.N.3
Schinazi, R.F.4
Schleuter-Wirtz, S.5
Tharnish, P.6
Barnett, T.7
Ermolieff, J.8
Tang, J.9
Brettreich, M.10
Hirsch, A.11
-
26
-
-
0034649734
-
-
Marcorin, G. L., Ros, T. D., Castellano, S., Stefancich, G., Bonin, I., Miertus, S., and Prato, M. (2000) Org. Lett. 2, 3955-3958.
-
(2000)
Org. Lett.
, vol.2
, pp. 3955-3958
-
-
Marcorin, G.L.1
Ros, T.D.2
Castellano, S.3
Stefancich, G.4
Bonin, I.5
Miertus, S.6
Prato, M.7
-
27
-
-
0013092509
-
-
Da Ros, T., Spalluto, G., and Prato, M. (2001) Croat. Chem. Acta 74, 743-755.
-
(2001)
Croat. Chem. Acta.
, vol.74
, pp. 743-755
-
-
Da Ros, T.1
Spalluto, G.2
Prato, M.3
-
28
-
-
0001396269
-
-
Bingel, C. (1993) Chem. Ber. 126, 1957-1959.
-
(1993)
Chem. Ber.
, vol.126
, pp. 1957-1959
-
-
Bingel, C.1
-
29
-
-
33646650705
-
-
Tuckerman, M. E., Martyna, G. J., and Berne, B. J. (1992) J. Chem. Phys. 97, 1990-2001.
-
(1992)
J. Chem. Phys.
, vol.97
, pp. 1990-2001
-
-
Tuckerman, M.E.1
Martyna, G.J.2
Berne, B.J.3
-
30
-
-
0000026966
-
-
Martyna, G. J., Tuckerman, M. E., Tobias, D. J., and Klein, M. L. (1996) Mol. Phys. 87, 1117-1157.
-
(1996)
Mol. Phys.
, vol.87
, pp. 1117-1157
-
-
Martyna, G.J.1
Tuckerman, M.E.2
Tobias, D.J.3
Klein, M.L.4
-
31
-
-
36449000062
-
-
Martyna, G. J., Tuckerman, M. E., and Klein, M. L. (1992) J. Chem. Phys. 97, 2635-2643.
-
(1992)
J. Chem. Phys.
, vol.97
, pp. 2635-2643
-
-
Martyna, G.J.1
Tuckerman, M.E.2
Klein, M.L.3
-
32
-
-
33645961739
-
-
Essman, U., Perera, L., Berkowitz, M. L., Darden, T., Lee, H., and Pedersen, L. G. (1995) J. Chem. Phys. 103, 8577-8593.
-
(1995)
J. Chem. Phys.
, vol.103
, pp. 8577-8593
-
-
Essman, U.1
Perera, L.2
Berkowitz, M.L.3
Darden, T.4
Lee, H.5
Pedersen, L.G.6
-
33
-
-
24844474730
-
-
Procacci, P., Darden, T., and Marchi, M. (1996) J. Phys. Chem. 100, 10464-10468.
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 10464-10468
-
-
Procacci, P.1
Darden, T.2
Marchi, M.3
-
34
-
-
0026344399
-
-
Spinelli, S., Liu, Q. Z., and Alzari, P. M. (1991) Biochimie 73, 1391-1396.
-
(1991)
Biochimie
, vol.73
, pp. 1391-1396
-
-
Spinelli, S.1
Liu, Q.Z.2
Alzari, P.M.3
-
35
-
-
0013046038
-
-
Mi, H., Schuster, D. I., Wilson, S. R., and Tuckerman, M. E. (1999) Proc. Electrochem. Soc. 99, 256-262.
-
(1999)
Proc. Electrochem. Soc.
, vol.99
, pp. 256-262
-
-
Mi, H.1
Schuster, D.I.2
Wilson, S.R.3
Tuckerman, M.E.4
-
36
-
-
0034625286
-
-
Tuckerman, M. E., Yarne, D. A., Samuelson, S. O., Hughes, A. L., and Martyna, G. J. (2000) Comput. Phys. Commun. 128, 333-376.
-
(2000)
Comput. Phys. Commun.
, vol.128
, pp. 333-376
-
-
Tuckerman, M.E.1
Yarne, D.A.2
Samuelson, S.O.3
Hughes, A.L.4
Martyna, G.J.5
-
37
-
-
0041784950
-
-
MacKerell, A. D., Jr., Bashford, D., Bellott, M., Dumbrack, R. L., Evanseck, J. D., Field, M. J., Fischer, S., Guo, H., Ha, S., Joseph-McCarthy, D., Kuchnir, O., Kuczera, K., Lau, F. T. K., Mattos, C., Michnick, S., Ngo, T., Nguyen, D. T., Prodhom, B., Reiher, W. E., III, Roux, B., Schlenkrich, M., Smith, J. C., Stote, R., Straub, J., Watanabe, M., Wiorkiewicz-Kuczera, J., Yin, D., and Karplus, M. (1998) J. Phys. Chem. B 102, 3586-3616.
-
(1998)
J. Phys. Chem. B.
, vol.102
, pp. 3586-3616
-
-
MacKerell A.D., Jr.1
Bashford, D.2
Bellott, M.3
Dumbrack, R.L.4
Evanseck, J.D.5
Field, M.J.6
Fischer, S.7
Guo, H.8
Ha, S.9
Joseph-McCarthy, D.10
Kuchnir, O.11
Kuczera, K.12
Lau, F.T.K.13
Mattos, C.14
Michnick, S.15
Ngo, T.16
Nguyen, D.T.17
Prodhom, B.18
Reiher W.E. III19
Roux, B.20
Schlenkrich, M.21
Smith, J.C.22
Stote, R.23
Straub, J.24
Watanabe, M.25
Wiorkiewicz-Kuczera, J.26
Yin, D.27
Karplus, M.28
more..
-
38
-
-
0004016501
-
-
Jorgensen, W., Chandrasekhar, J., Madrua, J., Impey, R., and Klein, M. L. (1983) J. Chem. Phys. 79, 926-935.
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.1
Chandrasekhar, J.2
Madrua, J.3
Impey, R.4
Klein, M.L.5
-
39
-
-
33646940952
-
-
Ryckaert, J. P., Ciccotti, G., and Berendsen, H. J. C. (1977) J. Comput. Phys. 23, 327-341.
-
(1977)
J. Comput. Phys.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
40
-
-
0001672771
-
-
Ciccotti, G., Ferrario, M., and Ryckaert, J. P. (1982) Mol. Phys. 47, 1253-1264.
-
(1982)
Mol. Phys.
, vol.47
, pp. 1253-1264
-
-
Ciccotti, G.1
Ferrario, M.2
Ryckaert, J.P.3
-
43
-
-
0001008708
-
-
Martyna, G. J., Tobias, D. J., and Klein, M. L. (1993) J. Phys. Chem. 97, 12959-12966.
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 12959-12966
-
-
Martyna, G.J.1
Tobias, D.J.2
Klein, M.L.3
-
44
-
-
36449003554
-
-
Martyna, G. J., Tobias, D. J., and Klein, M. L. (1994) J. Chem. Phys. 101, 4177-4189.
-
(1994)
J. Chem. Phys.
, vol.101
, pp. 4177-4189
-
-
Martyna, G.J.1
Tobias, D.J.2
Klein, M.L.3
-
45
-
-
4243661501
-
-
Carter, E. A., Ciccotti, G., Hynes, J. T., and Kapral, R. (1989) Chem. Phys. Lett. 156, 472-477.
-
(1989)
Chem. Phys. Lett.
, vol.156
, pp. 472-477
-
-
Carter, E.A.1
Ciccotti, G.2
Hynes, J.T.3
Kapral, R.4
-
48
-
-
0037085922
-
-
Rosso, L., Minary, P., Zhu, Z., and Tuckerman, M. E. (2002) J. Chem. Phys. 116, 4389-4402.
-
(2002)
J. Chem. Phys.
, vol.116
, pp. 4389-4402
-
-
Rosso, L.1
Minary, P.2
Zhu, Z.3
Tuckerman, M.E.4
-
49
-
-
0035850539
-
-
Piana, S., Sebastiani, D., Carloni, P., and Parrinello, M. (2001) J. Am. Chem. Soc. 123, 8730-8737.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 8730-8737
-
-
Piana, S.1
Sebastiani, D.2
Carloni, P.3
Parrinello, M.4
-
50
-
-
0029859529
-
-
Smith, R., Brereton, I. M., Chai, R. Y., and Kent, S. B. H. (1996) Nat. Struct. Biol. 3, 946-950.
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 946-950
-
-
Smith, R.1
Brereton, I.M.2
Chai, R.Y.3
Kent, S.B.H.4
-
51
-
-
0025991290
-
-
Hyland, L. J., Tomaszek, T. A., Roberts, G. D., Carr, S. A., Magaard, V. W., Bryan, H. L., Fakhoury, S. A., Moore, M. L., Minnich, M. D., Culp, J. S., Desjarlais, R. L., and Meek, T. D. (1991) Biochemistry 30, 8441-8453.
-
(1991)
Biochemistry
, vol.30
, pp. 8441-8453
-
-
Hyland, L.J.1
Tomaszek, T.A.2
Roberts, G.D.3
Carr, S.A.4
Magaard, V.W.5
Bryan, H.L.6
Fakhoury, S.A.7
Moore, M.L.8
Minnich, M.D.9
Culp, J.S.10
Desjarlais, R.L.11
Meek, T.D.12
-
52
-
-
0025268321
-
-
Roberts, N. A., Martin, J. A., Kinchington, D., Broadhurst, A. V., Craig, J. C., Duncan, I. B., Galpin, S. A., Handa, B. K., Kay, J., Krohn, A., Lambert, R. W., Merritt, J. H., Mills, J. S., Parkes, K. E. B., Redshaw, S., Ritchie, A. J., Taylor, D. L., Thomas, G. J., and Machin, P. J. (1990) Science 248, 358-361.
-
(1990)
Science
, vol.248
, pp. 358-361
-
-
Roberts, N.A.1
Martin, J.A.2
Kinchington, D.3
Broadhurst, A.V.4
Craig, J.C.5
Duncan, I.B.6
Galpin, S.A.7
Handa, B.K.8
Kay, J.9
Krohn, A.10
Lambert, R.W.11
Merritt, J.H.12
Mills, J.S.13
Parkes, K.E.B.14
Redshaw, S.15
Ritchie, A.J.16
Taylor, D.L.17
Thomas, G.J.18
Machin, P.J.19
-
53
-
-
0033998647
-
-
Piana, S., and Carloni, P. (2000) Proteins: Struct., Funct., Genet. 39, 26-36.
-
(2000)
Proteins: Struct., Funct., Genet.
, vol.39
, pp. 26-36
-
-
Piana, S.1
Carloni, P.2
-
54
-
-
0013045294
-
-
manuscript in preparation
-
Rosso, L., and Tuckerman, M. E. (2003) manuscript in preparation.
-
(2003)
-
-
Rosso, L.1
Tuckerman, M.E.2
|