-
1
-
-
45349110886
-
FTIR and Raman investigation of cadmium binding by DNA
-
Alex, S., and P. Dupuis. 1989. FTIR and Raman investigation of cadmium binding by DNA. Inorg. Chim. Acta. 157:271-281.
-
(1989)
Inorg. Chim. Acta
, vol.157
, pp. 271-281
-
-
Alex, S.1
Dupuis, P.2
-
2
-
-
0034616327
-
A comparative study of calf thymus DNA binding to Cr(III) and Cr(VI) ions. Evidence for the guanine N-7 chromium-phosphate chelate formation
-
Arakawa, H., R. Ahmad, M. Naoui, and H. A. Tajmir-Riahi. 2000. A comparative study of calf thymus DNA binding to Cr(III) and Cr(VI) ions. Evidence for the guanine N-7 chromium-phosphate chelate formation. J. Biol. Chem. 275:10150-10153.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 10150-10153
-
-
Arakawa, H.1
Ahmad, R.2
Naoui, M.3
Tajmir-Riahi, H.A.4
-
3
-
-
0034874536
-
Silver(I) complexes with DNA and RNA studied by Fourier transform infrared spectroscopy and capillary electrophoresis
-
Arakawa, H., J. F. Neault, and H. A. Tajmir-Riahi. 2001a. Silver(I) complexes with DNA and RNA studied by Fourier transform infrared spectroscopy and capillary electrophoresis. Biophys. J. 81:1580-1587.
-
(2001)
Biophys. J.
, vol.81
, pp. 1580-1587
-
-
Arakawa, H.1
Neault, J.F.2
Tajmir-Riahi, H.A.3
-
4
-
-
0034934767
-
Calf-thymus DNA interaction with Cr(III)-galate and Cr(III)-ethylgalate studied by FTIR spectroscopy and capillary electrophoresis
-
Arakawa, H., N. Watanabe, and H. A. Tajmir-Riahi. 2001b. Calf-thymus DNA interaction with Cr(III)-galate and Cr(III)-ethylgalate studied by FTIR spectroscopy and capillary electrophoresis. Bull. Chem. Soc. Jpn. 74:1075-1082.
-
(2001)
Bull. Chem. Soc. Jpn.
, vol.74
, pp. 1075-1082
-
-
Arakawa, H.1
Watanabe, N.2
Tajmir-Riahi, H.A.3
-
5
-
-
84987335988
-
Infrared studies on the backbone conformation of nucleic acids
-
Brahms, S., J. Brahms, and J. Pilet. 1974. Infrared studies on the backbone conformation of nucleic acids. Isr. J. Chem. 12:153-163.
-
(1974)
Isr. J. Chem.
, vol.12
, pp. 153-163
-
-
Brahms, S.1
Brahms, J.2
Pilet, J.3
-
6
-
-
0033600794
-
Absence of minor groove monovalent cations in the crosslinked dodecamer C-G-C-G-A-A-T-T-C-G-G
-
Chiu, T. K., M. Kaczor-Grzeskowiak, and R. E. Dickerson. 1999. Absence of minor groove monovalent cations in the crosslinked dodecamer C-G-C-G-A-A-T-T-C-G-G. J. Mol. Biol. 292:589-608.
-
(1999)
J. Mol. Biol.
, vol.292
, pp. 589-608
-
-
Chiu, T.K.1
Kaczor-Grzeskowiak, M.2
Dickerson, R.E.3
-
7
-
-
0034714010
-
1 Å crystal structure of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium
-
Chiu, T. K., and R. E. Dickerson. 2000. 1 Å crystal structure of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium. J. Mol. Biol. 301:915-945.
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 915-945
-
-
Chiu, T.K.1
Dickerson, R.E.2
-
8
-
-
0034681195
-
Sequence-specific binding of counterions to B-DNA
-
Denisov, V. P., and B. Halle. 2000. Sequence-specific binding of counterions to B-DNA. Proc. Natl. Acad. Sci. USA. 97:629-633.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 629-633
-
-
Denisov, V.P.1
Halle, B.2
-
9
-
-
0022423050
-
The infrared spectrum and structure of type I complex of silver and DNA
-
DiRico, D. E. Jr., K. B. Keller, and K. A. Hartman. 1985. The infrared spectrum and structure of type I complex of silver and DNA. Nucleic Acids Res. 13:251-260.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 251-260
-
-
DiRico D.E., Jr.1
Keller, K.B.2
Hartman, K.A.3
-
10
-
-
0027365639
-
Raman spectroscopy of DNA-metal complexes. I. Interactions and conformational effects of the divalent cations: Mg, Ca, Sr, Ba, Mn, Co, Ni, Cu, Pd and Cd
-
Duguid, J. G., J. M. Benevides, V. A. Bloomfield, and G. J. Thomas Jr. 1993. Raman spectroscopy of DNA-metal complexes. I. Interactions and conformational effects of the divalent cations: Mg, Ca, Sr, Ba, Mn, Co, Ni, Cu, Pd and Cd. Biophys. J. 65:1916-1928.
-
(1993)
Biophys. J.
, vol.65
, pp. 1916-1928
-
-
Duguid, J.G.1
Benevides, J.M.2
Bloomfield, V.A.3
Thomas G.J., Jr.4
-
12
-
-
0014422451
-
Interactions of metal ions with polynucleotides and related compounds. XII. The relative effect of various metal ions on DNA helicity
-
Eichhorn, G. L., and Y. A. Shin. 1968. Interactions of metal ions with polynucleotides and related compounds. XII. The relative effect of various metal ions on DNA helicity. J. Am. Chem. Soc. 90:7323-7328.
-
(1968)
J. Am. Chem. Soc.
, vol.90
, pp. 7323-7328
-
-
Eichhorn, G.L.1
Shin, Y.A.2
-
13
-
-
0032530598
-
A capillary electrophoresis mobility shift assay for protein-DNA binding affinities free in solution
-
Foulds, G. J., and F. A. Etzkom. 1998. A capillary electrophoresis mobility shift assay for protein-DNA binding affinities free in solution. Nucleic Acids Res. 26:4304-4305.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 4304-4305
-
-
Foulds, G.J.1
Etzkom, F.A.2
-
14
-
-
0022425387
-
Structural basis for stabilization of Z-DNA by cobalt hexaammine and magnesium cations
-
Gessner, R. V., G. J. Quigley, A. H. J. Wang, G. A. van der Marel, J. H. van Boom, and A. Rich. 1985. Structural basis for stabilization of Z-DNA by cobalt hexaammine and magnesium cations. Biochemistry. 24:237-240.
-
(1985)
Biochemistry
, vol.24
, pp. 237-240
-
-
Gessner, R.V.1
Quigley, G.J.2
Wang, A.H.J.3
Van der Marel, G.A.4
Van Boom, J.H.5
Rich, A.6
-
15
-
-
0032127813
-
A binding shift assay for the zinc-bound and zinc-free HIV-1 nucleocapsid protein by capillary electrophoresis
-
Guszczynski, T., and T. D. Copeland. 1998. A binding shift assay for the zinc-bound and zinc-free HIV-1 nucleocapsid protein by capillary electrophoresis. Anal. Biochem. 260:212-217.
-
(1998)
Anal. Biochem.
, vol.260
, pp. 212-217
-
-
Guszczynski, T.1
Copeland, T.D.2
-
16
-
-
0034802485
-
Influence of the dynamic positions of cations on the structure of the DNA minor groove: Sequence-dependent effects
-
Hamelberg, D., L. D. Williams, and W. D. Wilson. 2001. Influence of the dynamic positions of cations on the structure of the DNA minor groove: sequence-dependent effects. J. Am. Chem. Soc. 123:7745-7755.
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 7745-7755
-
-
Hamelberg, D.1
Williams, L.D.2
Wilson, W.D.3
-
17
-
-
0034327565
-
Flexible structure of DNA: Ion dependence of minor-groove structure and dynamics
-
Hamelberg, D., L. McFail-Isom, L. D. Williams, and W. D. Wilson. 2000. Flexible structure of DNA: ion dependence of minor-groove structure and dynamics. J. Am. Chem. Soc. 122:10513-10520.
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 10513-10520
-
-
Hamelberg, D.1
McFail-Isom, L.2
Williams, L.D.3
Wilson, W.D.4
-
18
-
-
0035964383
-
Locating monovalent cations in the grooves of B-DNA
-
Howerton, S. B., C. C. Sines, D. VanDerveer, and L. D. Williams. 2001. Locating monovalent cations in the grooves of B-DNA. Biochemistry. 40:10023-10031.
-
(2001)
Biochemistry
, vol.40
, pp. 10023-10031
-
-
Howerton, S.B.1
Sines, C.C.2
VanDerveer, D.3
Williams, L.D.4
-
19
-
-
0030763137
-
Localization of divalent metal ions in the minor groove of DNA A-tracts
-
Hud, N. V., and J. Feigon. 1997. Localization of divalent metal ions in the minor groove of DNA A-tracts. J. Am. Chem. Soc. 119:5756-5757.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 5756-5757
-
-
Hud, N.V.1
Feigon, J.2
-
20
-
-
0035367927
-
DNA-cation interactions: The major and minor grooves are flexible ionophores
-
Hud, N. V., and M. Polak. 2001. DNA-cation interactions: the major and minor grooves are flexible ionophores. Curr. Opin. Struct. Biol. 11:293-301.
-
(2001)
Curr. Opin. Struct. Biol.
, vol.11
, pp. 293-301
-
-
Hud, N.V.1
Polak, M.2
-
21
-
-
0015138001
-
Site and thermodynamic quantities associated with proton and metal ion interaction with ribonucleic acid, deoxyribonucleic acid, and their constituent bases, nucleosides, and nucleotides
-
Izatt, R. E., J. J. Christensen, and J. H. Ryting. 1971. Site and thermodynamic quantities associated with proton and metal ion interaction with ribonucleic acid, deoxyribonucleic acid, and their constituent bases, nucleosides, and nucleotides. Chem. Rev. 71:439-481.
-
(1971)
Chem. Rev.
, vol.71
, pp. 439-481
-
-
Izatt, R.E.1
Christensen, J.J.2
Ryting, J.H.3
-
22
-
-
0020490025
-
Numbers of receptor sites from Scatchard graphs: Facts and fantasies
-
Klotz, M. I. 1982. Numbers of receptor sites from Scatchard graphs: facts and fantasies. Science. 217:1247-1249.
-
(1982)
Science
, vol.217
, pp. 1247-1249
-
-
Klotz, M.I.1
-
23
-
-
0015209388
-
Properties of graphical representations of multiple classes of binding sites
-
Klotz, M. I., and L. D. Hunston. 1971. Properties of graphical representations of multiple classes of binding sites. Biochemistry. 10:3065-3069.
-
(1971)
Biochemistry
, vol.10
, pp. 3065-3069
-
-
Klotz, M.I.1
Hunston, L.D.2
-
26
-
-
0032189814
-
A robust method for determining DNA binding constants using capillary zone electrophoresis
-
Li, C., and L. M. Martin. 1998. A robust method for determining DNA binding constants using capillary zone electrophoresis. Anal. Biochem. 263:72-78.
-
(1998)
Anal. Biochem.
, vol.263
, pp. 72-78
-
-
Li, C.1
Martin, L.M.2
-
27
-
-
0031880566
-
A Gel electrophoresis study of the competitive effects of monovalent counterion on the extent of divalent counterions binding to DNA
-
Li, A. Z., H. Huang, X. Re, L. J. Qi, and K. A. Marx. 1998. A Gel electrophoresis study of the competitive effects of monovalent counterion on the extent of divalent counterions binding to DNA. Biophys. J. 74:964-973.
-
(1998)
Biophys. J.
, vol.74
, pp. 964-973
-
-
Li, A.Z.1
Huang, H.2
Re, X.3
Qi, L.J.4
Marx, K.A.5
-
28
-
-
0031768808
-
The structure of most studied DNA fragment changes under the influence of ions: A new packing of d(CGCGAATTCGCG)
-
Liu, J., L. Malinia, T. Huynh-Dinh, and J. A. Subirana. 1998. The structure of most studied DNA fragment changes under the influence of ions: a new packing of d(CGCGAATTCGCG). FEBS Lett. 438:211-214.
-
(1998)
FEBS Lett.
, vol.438
, pp. 211-214
-
-
Liu, J.1
Malinia, L.2
Huynh-Dinh, T.3
Subirana, J.A.4
-
30
-
-
0027155363
-
Conditions for the stability of the B, C, and Z structural forms of poly(dG-dC) in the presence of lithium, potassium, magnesium, calcium, and zinc cations
-
Loprete, D. M., and K. A. Hartman. 1993. Conditions for the stability of the B, C, and Z structural forms of poly(dG-dC) in the presence of lithium, potassium, magnesium, calcium, and zinc cations. Biochemistry. 32:4077-4082.
-
(1993)
Biochemistry
, vol.32
, pp. 4077-4082
-
-
Loprete, D.M.1
Hartman, K.A.2
-
32
-
-
0345363149
-
Atomic-resolution crystal structures of B-DNA reveal specific influence of divalent metal ion on conformation and packing
-
Minasov, G., V. Tereshko, and M. Egli. 1999. Atomic-resolution crystal structures of B-DNA reveal specific influence of divalent metal ion on conformation and packing. J. Mol. Biol. 291:83-99.
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 83-99
-
-
Minasov, G.1
Tereshko, V.2
Egli, M.3
-
33
-
-
0022512551
-
8-acetylyspermidine, and magnesium: Determination from analysis of broadening of thermal denaturation curves
-
8-acetylyspermidine, and magnesium: determination from analysis of broadening of thermal denaturation curves. Arch. Biochem. Biophys. 246:225-232.
-
(1986)
Arch. Biochem. Biophys.
, vol.246
, pp. 225-232
-
-
Morgan, J.E.1
Blankenship, J.W.2
Matthews, H.R.3
-
34
-
-
0033065592
-
Structural analysis of DNA-chlorophyll complexes by Fourier transform infrared difference spectroscopy
-
Neault, J. F., and H. A. Tajmir-Riahi. 1999. Structural analysis of DNA-chlorophyll complexes by Fourier transform infrared difference spectroscopy. Biophys. J. 76:2177-2182.
-
(1999)
Biophys. J.
, vol.76
, pp. 2177-2182
-
-
Neault, J.F.1
Tajmir-Riahi, H.A.2
-
35
-
-
0021378939
-
Characterization of DNA structures by laser Raman spectroscopy
-
Prescot, B., W. Steinmetz, and G. J. Thomas Jr. 1984. Characterization of DNA structures by laser Raman spectroscopy. Biopolymers. 23:235-256.
-
(1984)
Biopolymers.
, vol.23
, pp. 235-256
-
-
Prescot, B.1
Steinmetz, W.2
Thomas G.J., Jr.3
-
36
-
-
0034669632
-
Cation mediate B-DNA conformational heterogeneity
-
Sines, C. C., L. McFail-Isom, S. B. Howerton, D. Van Derveer, and L. D. Williams. 2000. Cation mediate B-DNA conformational heterogeneity. J. Am. Chem. Soc. 122:11048-11056.
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 11048-11056
-
-
Sines, C.C.1
McFail-Isom, L.2
Howerton, S.B.3
Van Derveer, D.4
Williams, L.D.5
-
37
-
-
0038645688
-
Water and ions in a high resolution structure of B-DNA
-
Soler-Lopez, M., L. Malinina, J. Liu, T. Huynh-Dinh, and J. A. Subirana. 1999. Water and ions in a high resolution structure of B-DNA. J. Biol. Chem. 274:23683-23686.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 23683-23686
-
-
Soler-Lopez, M.1
Malinina, L.2
Liu, J.3
Huynh-Dinh, T.4
Subirana, J.A.5
-
38
-
-
0026104844
-
Evidential study of correlated events in biochemistry: Physicochemical mechanisms of nucleic acid hydration as revealed by factor analysis
-
Starikov, E. B., M. A. Semenov, V. Y. Maleev, and A. I. Gasan. 1991. Evidential study of correlated events in biochemistry: physicochemical mechanisms of nucleic acid hydration as revealed by factor analysis. Biopolymers. 31:255-273.
-
(1991)
Biopolymers
, vol.31
, pp. 255-273
-
-
Starikov, E.B.1
Semenov, M.A.2
Maleev, V.Y.3
Gasan, A.I.4
-
39
-
-
0035793210
-
Preferential counterion binding to A-tract DNA oligomers
-
Stellwagen, N. C., S. Magnusdottir, C. Gelfi, and P. G. Righetti. 2001. Preferential counterion binding to A-tract DNA oligomers. J. Mol. Biol. 305:1025-1033.
-
(2001)
J. Mol. Biol.
, vol.305
, pp. 1025-1033
-
-
Stellwagen, N.C.1
Magnusdottir, S.2
Gelfi, C.3
Righetti, P.G.4
-
40
-
-
0002561405
-
Infrared spectral studies of DNA conformations
-
R. J. H. Clark and R. E. Hester, editors. Wiley-Heyden, New York
-
Taillandier, E., J. Liquier, and J. A. Taboury. 1985. Infrared spectral studies of DNA conformations. In Advances in Infrared and Raman Spectroscopy. R. J. H. Clark and R. E. Hester, editors. Wiley-Heyden, New York. 65-114.
-
(1985)
Advances in Infrared and Raman Spectroscopy
, pp. 65-114
-
-
Taillandier, E.1
Liquier, J.2
Taboury, J.A.3
-
41
-
-
0029093314
-
Does DNA acid fixation produce left-handed Z structure?
-
Tajmir-Riahi, H. A., J. F. Neault, and M. Naoui. 1995. Does DNA acid fixation produce left-handed Z structure? FEBS Lett. 370:105-108.
-
(1995)
FEBS Lett.
, vol.370
, pp. 105-108
-
-
Tajmir-Riahi, H.A.1
Neault, J.F.2
Naoui, M.3
-
42
-
-
0033594498
-
A hydrat-ion spine in a B-DNA minor groove
-
Tereshko, V., G. Minasov, and M. Egli. 1999. A hydrat-ion spine in a B-DNA minor groove. J. Am. Chem. Soc. 121:3590-3595.
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 3590-3595
-
-
Tereshko, V.1
Minasov, G.2
Egli, M.3
-
43
-
-
0030048676
-
DNA-protein binding assays from a single sea urchin egg: A high-sensitive capillary electrophoresis method
-
Xian, J., M. G. Harrington, and E. H. Davidson. 1996. DNA-protein binding assays from a single sea urchin egg: a high-sensitive capillary electrophoresis method. Proc. Natl. Acad. Sci. USA. 93:86-90.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 86-90
-
-
Xian, J.1
Harrington, M.G.2
Davidson, E.H.3
|