-
1
-
-
0344333443
-
Repression of phenol catabolism by organic acids in Ralstonia eutropha
-
Ampe, F., D. Leonard, and N. D. Lindley. 1998. Repression of phenol catabolism by organic acids in Ralstonia eutropha. Appl. Environ. Microbiol. 64:1-6.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1-6
-
-
Ampe, F.1
Leonard, D.2
Lindley, N.D.3
-
2
-
-
0028799364
-
Acetate utilization is inhibited by benzoate in Alcaligenes eutrophus: Evidence for transcriptional control of the expression of acoE coding for acetyl coenzyme A synthetase
-
Ampe, F., and N. D. Lindley. 1995. Acetate utilization is inhibited by benzoate in Alcaligenes eutrophus: evidence for transcriptional control of the expression of acoE coding for acetyl coenzyme A synthetase. J. Bacteriol. 177:5826-5833.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 5826-5833
-
-
Ampe, F.1
Lindley, N.D.2
-
3
-
-
0030862631
-
Benzoate degradation via the ortho pathway in Alcaligenes eutrophus is perturbed by succinate
-
Ampe, F., J.-L. Uribelarrea, G. M. F. Aragao, and N. D. Lindley. 1997. Benzoate degradation via the ortho pathway in Alcaligenes eutrophus is perturbed by succinate. Appl. Environ. Microbiol. 63:2765-2770.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 2765-2770
-
-
Ampe, F.1
Uribelarrea, J.-L.2
Aragao, G.M.F.3
Lindley, N.D.4
-
4
-
-
0037188489
-
Synergistic transcriptional activation by one regulatory protein in response to two metabolites
-
Bundy, B. M., L. S. Collier, T. R. Hoover, and E. L. Neidle. 2002. Synergistic transcriptional activation by one regulatory protein in response to two metabolites. Proc. Natl. Acad. Sci. USA 99:7693-7698.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7693-7698
-
-
Bundy, B.M.1
Collier, L.S.2
Hoover, T.R.3
Neidle, E.L.4
-
5
-
-
0036231824
-
The benPK operon, proposed to play a role in transport, is part of a regulon for benzoate catabolism in Acinetobacter sp. strain ADP1
-
Clark, T. J., C. Momany, and E. L. Neidle. 2002. The benPK operon, proposed to play a role in transport, is part of a regulon for benzoate catabolism in Acinetobacter sp. strain ADP1. Microbiology 148:1213-1223.
-
(2002)
Microbiology
, vol.148
, pp. 1213-1223
-
-
Clark, T.J.1
Momany, C.2
Neidle, E.L.3
-
6
-
-
0031958208
-
Regulation of benzoate degradation in Acinetobacter sp. strain ADP1 by BenM, a LysR-type transcriptional activator
-
Collier, L. S., G. L. Gaines III, and E. L. Neidle. 1998. Regulation of benzoate degradation in Acinetobacter sp. strain ADP1 by BenM, a LysR-type transcriptional activator. J. Bactcriol. 180:2493-2501.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 2493-2501
-
-
Collier, L.S.1
Gaines G.L. III2
Neidle, E.L.3
-
7
-
-
0033623422
-
BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida
-
Cowles, C. E., N. N. Nichols, and C. S. Harwood. 2000. BenR, a XylS homologue, regulates three different pathways of aromatic acid degradation in Pseudomonas putida. J. Bacteriol. 182:6339-6346.
-
(2000)
J. Bacteriol.
, vol.182
, pp. 6339-6346
-
-
Cowles, C.E.1
Nichols, N.N.2
Harwood, C.S.3
-
8
-
-
0035988320
-
Multiple operons connected with catabolism of aromatic compounds in Acinetobacter sp. strain ADP1 are under carbon catabolite repression
-
Dal, S., I. Steiner, and U. Gerischer. 2002. Multiple operons connected with catabolism of aromatic compounds in Acinetobacter sp. strain ADP1 are under carbon catabolite repression. J. Mol. Microbiol. Biotechnol. 4:389-404.
-
(2002)
J. Mol. Microbiol. Biotechnol.
, vol.4
, pp. 389-404
-
-
Dal, S.1
Steiner, I.2
Gerischer, U.3
-
9
-
-
0035838554
-
Spontaneous mutations affecting transcriptional regulation by protocatechuate in Acinetobacter
-
D'Argenio, D. A., A. Segura, P. V. Bunz, and L. N. Ornston. 2001. Spontaneous mutations affecting transcriptional regulation by protocatechuate in Acinetobacter. FEMS Microbiol. Lett. 201:15-19.
-
(2001)
FEMS Microbiol. Lett.
, vol.201
, pp. 15-19
-
-
D'Argenio, D.A.1
Segura, A.2
Bunz, P.V.3
Ornston, L.N.4
-
10
-
-
0033000387
-
The physiological contribution of Acinetobacter PcaK, a transport system that acts upon protocatechuate, can be masked by the overlapping specificity of VanK
-
D'Argenio, D. A., A. Segura, W. M. Coco, P. V. Bunz, and L. N. Ornston. 1999. The physiological contribution of Acinetobacter PcaK, a transport system that acts upon protocatechuate, can be masked by the overlapping specificity of VanK. J. Bacteriol. 181:3505-3515.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 3505-3515
-
-
D'Argenio, D.A.1
Segura, A.2
Coco, W.M.3
Bunz, P.V.4
Ornston, L.N.5
-
11
-
-
0027321256
-
Identification of the transcriptional activator PobR and characterization of its role in the expression of pobA, the structural gene forp-hydroxybenzoate hydroxylase in Acinetobacter calcoaceticus
-
DiMarco, A. A., B. Averhoff, and L. N. Ornston. 1993. Identification of the transcriptional activator PobR and characterization of its role in the expression of pobA, the structural gene forp-hydroxybenzoate hydroxylase in Acinetobacter calcoaceticus. J. Bacteriol. 175:4499-4506.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 4499-4506
-
-
DiMarco, A.A.1
Averhoff, B.2
Ornston, L.N.3
-
12
-
-
0028365190
-
Regulation ofp-hydroxybenzoate hxydroxylase synthesis by PobR bound to an operator in Acinetobacter calcoaceticus
-
DiMarco, A. A., and L. N. Ornston. 1994. Regulation ofp-hydroxybenzoate hxydroxylase synthesis by PobR bound to an operator in Acinetobacter calcoaceticus. J. Bacteriol. 176:4277-4284.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 4277-4284
-
-
DiMarco, A.A.1
Ornston, L.N.2
-
13
-
-
0036306439
-
Inactivation of cytochrome o ubiquinol oxidase relieves catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway
-
Dinamarca, M. A., A. Ruiz-Manzano, and F. Rojo. 2002. Inactivation of cytochrome o ubiquinol oxidase relieves catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway. J. Bacteriol. 184:3785-3793.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 3785-3793
-
-
Dinamarca, M.A.1
Ruiz-Manzano, A.2
Rojo, F.3
-
14
-
-
0036175122
-
+ symporter family of permeases are required for 4-hydroxybenzoate transport by PcaK from Pseudomonas putida
-
+ symporter family of permeases are required for 4-hydroxybenzoate transport by PcaK from Pseudomonas putida. J. Bacteriol. 184:1444-1448.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 1444-1448
-
-
Ditty, J.L.1
Harwood, C.S.2
-
15
-
-
0029848193
-
Novel nuclear magnetic resonance spectroscopy methods demonstrate preferential carbon source utilization by Acinetobacter calcoaceticus
-
Gaines, G. L., III, L. Smith, and E. L. Neidle. 1996. Novel nuclear magnetic resonance spectroscopy methods demonstrate preferential carbon source utilization by Acinetobacter calcoaceticus. J. Bacteriol. 178:6833-6841.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 6833-6841
-
-
Gaines G.L. III1
Smith, L.2
Neidle, E.L.3
-
16
-
-
0031938056
-
PcaU, a transcriptional activator of genes for protocatechuate utilization in Acinetobacter
-
Gerischer, U., A. Segura, and L. N. Ornston. 1998. PcaU, a transcriptional activator of genes for protocatechuate utilization in Acinetobacter. J. Bacteriol. 180:1512-1524.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 1512-1524
-
-
Gerischer, U.1
Segura, A.2
Ornston, L.N.3
-
17
-
-
0028172818
-
Identification of the pcaRKF gene cluster from Pseudomonas putida: Involvement in chemotaxis, biodegradation, and transport of 4-hydroxybenzoate
-
Harwood, C. S., N. N. Nichols, M.-K. Kim, J. L. Ditty, and R. E. Parales. 1994. Identification of the pcaRKF gene cluster from Pseudomonas putida: involvement in chemotaxis, biodegradation, and transport of 4-hydroxybenzoate. J. Bacteriol. 176:6479-6488.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 6479-6488
-
-
Harwood, C.S.1
Nichols, N.N.2
Kim, M.-K.3
Ditty, J.L.4
Parales, R.E.5
-
18
-
-
0029795374
-
The β-ketoadipate pathway and the biology of self-identity
-
Harwood, C. S., and R. E. Parales. 1996. The β-ketoadipate pathway and the biology of self-identity. Annu. Rev. Microbiol. 50:553-590.
-
(1996)
Annu. Rev. Microbiol.
, vol.50
, pp. 553-590
-
-
Harwood, C.S.1
Parales, R.E.2
-
19
-
-
0034872273
-
Reversible accumulation of p-hydroxybenzoate and catechol determines the sequential decomposition of phenolic compounds in mixed substrate cultivations in pseudomonads
-
Heinaru, E., S. Viggor, E. Vedler, J. Truu, M. Merimaa, and A. Heinaru. 2001. Reversible accumulation of p-hydroxybenzoate and catechol determines the sequential decomposition of phenolic compounds in mixed substrate cultivations in pseudomonads. FEMS Microbiol. Ecol. 37:79-89.
-
(2001)
FEMS Microbiol. Ecol.
, vol.37
, pp. 79-89
-
-
Heinaru, E.1
Viggor, S.2
Vedler, E.3
Truu, J.4
Merimaa, M.5
Heinaru, A.6
-
20
-
-
0014503154
-
Transformation of Acinetobacter calco-aceticus (Bacterium anitratum)
-
Juni, E, and A. Janik. 1969. Transformation of Acinetobacter calco-aceticus (Bacterium anitratum). J. Bacteriol. 98:281-288.
-
(1969)
J. Bacteriol.
, vol.98
, pp. 281-288
-
-
Juni, E.1
Janik, A.2
-
21
-
-
0031683974
-
Mutation analysis of PobR and PcaU, closely related transcriptional activators in Acinetobacter
-
Kok, R. G., D. A. D'Argenio, and L. N. Ornston. 1998. Mutation analysis of PobR and PcaU, closely related transcriptional activators in Acinetobacter. J. Bacteriol. 180:5058-5069.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5058-5069
-
-
Kok, R.G.1
D'Argenio, D.A.2
Ornston, L.N.3
-
22
-
-
0034966733
-
The alkane hydroxylase gene of Burkholderia cepacia RR10 is under catabolite repression control
-
Marin, M. M., T. H. M. Smits, J. B. Van Beilen, and F. Rojo. 2001. The alkane hydroxylase gene of Burkholderia cepacia RR10 is under catabolite repression control. J. Bacteriol. 183:4202-4209.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 4202-4209
-
-
Marin, M.M.1
Smits, T.H.M.2
Van Beilen, J.B.3
Rojo, F.4
-
23
-
-
0030700662
-
A tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: Fumarate-mediated repression of the clcABD operon
-
McFall, S. M., B. Abraham, C. G. Narsolis, and A. M. Chakrabarty. 1997. A tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: fumarate-mediated repression of the clcABD operon. J. Bacteriol. 179:6729-6735.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 6729-6735
-
-
McFall, S.M.1
Abraham, B.2
Narsolis, C.G.3
Chakrabarty, A.M.4
-
24
-
-
0003785155
-
-
Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
Miller, J. H. 1972. Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, N.Y.
-
(1972)
Experiments in Molecular Genetics
-
-
Miller, J.H.1
-
25
-
-
0028841927
-
Repression of 4-hydroxybenzoate transport and degradation by benzoate: A new layer of regulatory control in the Pseudomonasputida β-ketoadipate pathway
-
Nichols, N. N., and C. S. Harwood. 1995. Repression of 4-hydroxybenzoate transport and degradation by benzoate: a new layer of regulatory control in the Pseudomonasputida β-ketoadipate pathway. J. Bacteriol. 177:7033-7040.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 7033-7040
-
-
Nichols, N.N.1
Harwood, C.S.2
-
26
-
-
0000059204
-
Gel-shift assay and DNase I footprinting analysis of transcriptional regulation of biodegradation genes
-
Parsek, M. R., W. M. Coco, and A. M. Chakrabarty. 1994. Gel-shift assay and DNase I footprinting analysis of transcriptional regulation of biodegradation genes. Methods Mol. Genet. 3:273-290.
-
(1994)
Methods Mol. Genet.
, vol.3
, pp. 273-290
-
-
Parsek, M.R.1
Coco, W.M.2
Chakrabarty, A.M.3
-
27
-
-
0034784867
-
The cyo operon of Pseudomonas putida is involved in carbon catabolite repression of phenol degradation
-
Petruschka, L., G. Burchhardt, C. Muiller, C. Weihe, and H. Herrmann. 2001. The cyo operon of Pseudomonas putida is involved in carbon catabolite repression of phenol degradation. Mol. Genet. Genomics 266:199-206.
-
(2001)
Mol. Genet. Genomics
, vol.266
, pp. 199-206
-
-
Petruschka, L.1
Burchhardt, G.2
Muiller, C.3
Weihe, C.4
Herrmann, H.5
-
28
-
-
0034075043
-
Engineering bacteria for bioremediation
-
Pieper, D. H., and W. Reineke. 2000. Engineering bacteria for bioremediation. Curr. Opin. Biotechnol. 11:262-270.
-
(2000)
Curr. Opin. Biotechnol.
, vol.11
, pp. 262-270
-
-
Pieper, D.H.1
Reineke, W.2
-
29
-
-
0036203062
-
Differential DNA binding of transcriptional regulator PcaU from Acinetobacter sp. strain ADP1
-
Popp, R., T. Kohl, P. Patz, G. Trautwein, and U. Gerischer. 2002. Differential DNA binding of transcriptional regulator PcaU from Acinetobacter sp. strain ADP1. J. Bacteriol. 184:1988-1997.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 1988-1997
-
-
Popp, R.1
Kohl, T.2
Patz, P.3
Trautwein, G.4
Gerischer, U.5
-
30
-
-
0037342721
-
Genome plasticity in Acinetobacter: New degradative capabilities acquired by the spontaneous amplification of large chromosomal segments
-
Reams, A. B., and. E. L. Neidle. 2003. Genome plasticity in Acinetobacter: new degradative capabilities acquired by the spontaneous amplification of large chromosomal segments. Mol. Microbiol. 47:1291-1304.
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 1291-1304
-
-
Reams, A.B.1
Neidle, E.L.2
-
31
-
-
0028865450
-
catM encodes a LysR-type transcriptional activator regulating catechol degradation in Acinetobacter calcoaceticus
-
Romero-Arroyo, C. E., M. A. Schell, G. L. Gaines III, and E. L. Neidle. 1995. catM encodes a LysR-type transcriptional activator regulating catechol degradation in Acinetobacter calcoaceticus. J. Bacteriol. 177:5891-5898.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 5891-5898
-
-
Romero-Arroyo, C.E.1
Schell, M.A.2
Gaines G.L. III3
Neidle, E.L.4
-
32
-
-
2642644544
-
Multiple mechanisms controlling carbon metabolism in bacteria
-
Saier, M. H. 1998. Multiple mechanisms controlling carbon metabolism in bacteria. Biotechnol. Bioeng. 58:170-174.
-
(1998)
Biotechnol. Bioeng.
, vol.58
, pp. 170-174
-
-
Saier, M.H.1
-
33
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
34
-
-
0022541362
-
Cloning and expression of Acinetobacter calcoaceticus catBCDE genes in Pseudomonas putida and Escherichia coli
-
Shanley, M. S., E. L. Neidle, R. E. Parales, and L. N. Ornston. 1986. Cloning and expression of Acinetobacter calcoaceticus catBCDE genes in Pseudomonas putida and Escherichia coli. J. Bacteriol. 165:557-563.
-
(1986)
J. Bacteriol.
, vol.165
, pp. 557-563
-
-
Shanley, M.S.1
Neidle, E.L.2
Parales, R.E.3
Ornston, L.N.4
-
35
-
-
0033759266
-
Regulation of carbon catabolism in Bacillus species
-
Stulke, J., and W. Hillen. 2000. Regulation of carbon catabolism in Bacillus species. Annu. Rev. Microbiol. 54:849-880.
-
(2000)
Annu. Rev. Microbiol.
, vol.54
, pp. 849-880
-
-
Stulke, J.1
Hillen, W.2
-
36
-
-
0033515602
-
Multiple DNA binding activities of the novel site-specific recombinase, Piv, from Moraxella lacunata
-
Tobiason, D. M., A. G. Lenich, and A. C. Glasgow. 1999. Multiple DNA binding activities of the novel site-specific recombinase, Piv, from Moraxella lacunata. J. Biol. Chem. 274:9698-9706.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 9698-9706
-
-
Tobiason, D.M.1
Lenich, A.G.2
Glasgow, A.C.3
-
37
-
-
0034866160
-
Growth medium composition-determined regulatory mechanisms are superimposed on CatR-mediated transcription from the pheBA and catBCA promoters in Pseudomonas putida
-
Tover, A., E. L. Ojangu, and M. Kivisaar. 2001. Growth medium composition-determined regulatory mechanisms are superimposed on CatR-mediated transcription from the pheBA and catBCA promoters in Pseudomonas putida. Microbiology 147:2149-2156.
-
(2001)
Microbiology
, vol.147
, pp. 2149-2156
-
-
Tover, A.1
Ojangu, E.L.2
Kivisaar, M.3
-
38
-
-
0035153271
-
Effects exerted by transcriptional regulator PcaU from Acinetobacter sp. strain ADP1
-
Trautwein, G., and U. Gerischer. 2001. Effects exerted by transcriptional regulator PcaU from Acinetobacter sp. strain ADP1. J. Bacteriol. 183:873-881.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 873-881
-
-
Trautwein, G.1
Gerischer, U.2
-
39
-
-
0000591153
-
Evolution of a catabolic pathway
-
Young, D. M., D. Parke, D. A. D'Argenio, M. A. Smith, and L. N. Ornston. 2001. Evolution of a catabolic pathway. ASM News 67:362-369.
-
(2001)
ASM News
, vol.67
, pp. 362-369
-
-
Young, D.M.1
Parke, D.2
D'Argenio, D.A.3
Smith, M.A.4
Ornston, L.N.5
-
40
-
-
0035682220
-
Role of the crc gene in catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway
-
Yuste, L., and F. Rojo. 2001. Role of the crc gene in catabolic repression of the Pseudomonas putida GPo1 alkane degradation pathway. J. Bacteriol. 183:6197-6206.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 6197-6206
-
-
Yuste, L.1
Rojo, F.2
|