메뉴 건너뛰기




Volumn 13, Issue 1, 2003, Pages 1168-1174

Predicting protein cellular localization using a domain projection method

Author keywords

[No Author keywords available]

Indexed keywords

CELL PROTEIN; CYTOPLASM PROTEIN; MEMBRANE PROTEIN; NUCLEAR PROTEIN;

EID: 0037224288     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (15)

References (31)
  • 3
    • 0033957834 scopus 로고    scopus 로고
    • The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
    • Bairoch, A. and Apweiler, R. 2000. The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000. Nucleic Acids Res. 28: 45-48.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 45-48
    • Bairoch, A.1    Apweiler, R.2
  • 6
    • 34147120474 scopus 로고
    • A note on two problems in connection with graphs
    • Dijkstra, E.W. 1959. A note on two problems in connection with graphs. Numerische Mathematik 1: 269-271.
    • (1959) Numerische Mathematik , vol.1 , pp. 269-271
    • Dijkstra, E.W.1
  • 7
    • 0034714135 scopus 로고    scopus 로고
    • A Bayesian system integrating expression data with sequence patterns for localizing proteins: Comprehensive application to the yeast genome
    • Drawid, A. and Gerstein, M. 2000. A Bayesian system integrating expression data with sequence patterns for localizing proteins: Comprehensive application to the yeast genome. J. Mol. Biol. 301: 1059-1075.
    • (2000) J. Mol. Biol. , vol.301 , pp. 1059-1075
    • Drawid, A.1    Gerstein, M.2
  • 8
    • 0031887946 scopus 로고    scopus 로고
    • Wanted: Subcellular localization of proteins based on sequence
    • Eisenhaber, F. and Bork, P. 1998. Wanted: Subcellular localization of proteins based on sequence. Trends Cell Biol. 8: 169-170.
    • (1998) Trends Cell Biol. , vol.8 , pp. 169-170
    • Eisenhaber, F.1    Bork, P.2
  • 9
    • 0032822429 scopus 로고    scopus 로고
    • Evaluation of human-readable annotation in biomolecular sequence databases with biological rule libraries
    • Eisenhaber, F. and Bork, P. 1999. Evaluation of human-readable annotation in biomolecular sequence databases with biological rule libraries. Bioinformatics 15: 528-535.
    • (1999) Bioinformatics , vol.15 , pp. 528-535
    • Eisenhaber, F.1    Bork, P.2
  • 10
    • 84945709831 scopus 로고
    • Algorithm 97: Shortest path
    • Floyd, R.W. 1962. Algorithm 97: Shortest path. Comm. ACM 5: 345.
    • (1962) Comm. ACM , vol.5 , pp. 345
    • Floyd, R.W.1
  • 11
    • 0029984570 scopus 로고    scopus 로고
    • Nucleocytoplasmic transport
    • Gorlich, D. and Mattaj, I.W. 1996. Nucleocytoplasmic transport. Science 271: 1513-1518.
    • (1996) Science , vol.271 , pp. 1513-1518
    • Gorlich, D.1    Mattaj, I.W.2
  • 12
    • 0034843744 scopus 로고    scopus 로고
    • Support vector machine approach for protein subcellular localization prediction
    • Hua, S. and Sun, Z. 2001. Support vector machine approach for protein subcellular localization prediction. Bioinformatics 17: 721-728.
    • (2001) Bioinformatics , vol.17 , pp. 721-728
    • Hua, S.1    Sun, Z.2
  • 13
    • 0035371872 scopus 로고    scopus 로고
    • Re-SET-ting heterochromatin by histone methyltransferases
    • Jenuwein, T. 2001. Re-SET-ting heterochromatin by histone methyltransferases. Trends Cell Biol. 11: 266-273.
    • (2001) Trends Cell Biol. , vol.11 , pp. 266-273
    • Jenuwein, T.1
  • 14
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • Krogh, A., Larsson, B., von Heijne, G., and Sonnhammer, E.L. 2001. Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes. J. Mol. Biol. 305: 567-580.
    • (2001) J. Mol. Biol. , vol.305 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    von Heijne, G.3    Sonnhammer, E.L.4
  • 17
    • 0033738137 scopus 로고    scopus 로고
    • A comparison of signal sequence prediction methods using a test set of signal peptides
    • Menne, K.M., Hermjakob, H., and Apweiler, R. 2000. A comparison of signal sequence prediction methods using a test set of signal peptides. Bioinformatics 16: 741-742.
    • (2000) Bioinformatics , vol.16 , pp. 741-742
    • Menne, K.M.1    Hermjakob, H.2    Apweiler, R.3
  • 18
    • 0034899781 scopus 로고    scopus 로고
    • Evaluation of methods for the prediction of membrane spanning regions
    • Moller, S., Croning, M.D., and Apweiler, R. 2001. Evaluation of methods for the prediction of membrane spanning regions. Bioinformatics 17: 646-653.
    • (2001) Bioinformatics , vol.17 , pp. 646-653
    • Moller, S.1    Croning, M.D.2    Apweiler, R.3
  • 19
    • 0033909566 scopus 로고    scopus 로고
    • Protein sorting signals and prediction of subcellular localization
    • Nakai, K. 2000. Protein sorting signals and prediction of subcellular localization. Adv. Protein Chem. 54: 277-344.
    • (2000) Adv. Protein Chem. , vol.54 , pp. 277-344
    • Nakai, K.1
  • 20
    • 0032972509 scopus 로고    scopus 로고
    • PSORT: A program for detecting sorting signals in proteins and predicting their subcellular localization
    • Nakai, K. and Horton, P. 1999. PSORT: A program for detecting sorting signals in proteins and predicting their subcellular localization. Trends Biochem. Sci. 24: 34-36.
    • (1999) Trends Biochem. Sci. , vol.24 , pp. 34-36
    • Nakai, K.1    Horton, P.2
  • 21
    • 0030614959 scopus 로고    scopus 로고
    • Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
    • Nielsen, H., Engelbrecht, J., Brunak, S., and von Heijne, G. 1997. Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Protein Eng. 10: 1-6.
    • (1997) Protein Eng. , vol.10 , pp. 1-6
    • Nielsen, H.1    Engelbrecht, J.2    Brunak, S.3    von Heijne, G.4
  • 22
    • 0028881173 scopus 로고
    • Construction of genetic maps using distance geometry
    • Newell, W.R., Motts, R., Beck, S., and Lehrach, H. 1995. Construction of genetic maps using distance geometry. Genomics 30: 59-70.
    • (1995) Genomics , vol.30 , pp. 59-70
    • Newell, W.R.1    Motts, R.2    Beck, S.3    Lehrach, H.4
  • 23
    • 0034567049 scopus 로고    scopus 로고
    • Identification of domains from protein sequences
    • Ponting, C.P. and Birney, E. 2000. Identification of domains from protein sequences. Methods Mol. Biol. 143: 53-69.
    • (2000) Methods Mol. Biol. , vol.143 , pp. 53-69
    • Ponting, C.P.1    Birney, E.2
  • 25
    • 0032077533 scopus 로고    scopus 로고
    • Using neural networks for prediction of the subcellular location of proteins
    • Reinhardt, A. and Hubbard, T. 1998. Using neural networks for prediction of the subcellular location of proteins. Nucleic Acids Res. 26: 2230-2236.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 2230-2236
    • Reinhardt, A.1    Hubbard, T.2
  • 26
    • 0030451441 scopus 로고    scopus 로고
    • Identification of fission yeast nuclear markers using random polypeptide fusions with green fluorescent protein
    • Sawin, K.E. and Nurse, P. 1996. Identification of fission yeast nuclear markers using random polypeptide fusions with green fluorescent protein. Proc. Natl. Acad. Sci. 93: 15146-15151.
    • (1996) Proc. Natl. Acad. Sci. , vol.93 , pp. 15146-15151
    • Sawin, K.E.1    Nurse, P.2
  • 27
  • 29
    • 0034704229 scopus 로고    scopus 로고
    • A global geometric framework for nonlinear dimensionality reduction
    • Tenenbaum, J.B., de Silva, V., and Langford, J.C. 2000. A global geometric framework for nonlinear dimensionality reduction. Science 290: 2319-2323.
    • (2000) Science , vol.290 , pp. 2319-2323
    • Tenenbaum, J.B.1    de Silva, V.2    Langford, J.C.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.