-
1
-
-
0002965378
-
tRNA-ribosome interactions
-
Schimmel, P.R., Soll, D., and Abelson, J.N. (eds). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Cantor, C.R. (1979) tRNA-ribosome interactions. InTransfer RNA: Structure, Properties and Recognition. Schimmel, P.R., Soll, D., and Abelson, J.N. (eds). Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, pp. 363-392.
-
(1979)
Transfer RNA: Structure, Properties and Recognition
, pp. 363-392
-
-
Cantor, C.R.1
-
2
-
-
0022547355
-
Expression of peptide chain release factor 2 requires high-efficiency frame-shift
-
Craigen, W.J., and Caskey, C.T. (1986) Expression of peptide chain release factor 2 requires high-efficiency frame-shift. Nature 322:273-275.
-
(1986)
Nature
, vol.322
, pp. 273-275
-
-
Craigen, W.J.1
Caskey, C.T.2
-
3
-
-
0038689640
-
Shutdown in protein synthesis due to the expression of mini-genes in bacteria
-
Dinçbas, V., Heurgué-Hamard, V., Buckingham, R.H., Karimi, R., and Ehrenberg, M. (1999) Shutdown in protein synthesis due to the expression of mini-genes in bacteria. J Mol Biol 291:745-759.
-
(1999)
J Mol Biol
, vol.291
, pp. 745-759
-
-
Dinçbas, V.1
Heurgué-Hamard, V.2
Buckingham, R.H.3
Karimi, R.4
Ehrenberg, M.5
-
4
-
-
0034672060
-
A post-translational modification in the GGQ motif of RF2 from Escherichia coli stimulates termination of translation
-
Dinçbas-Renqvist, V., Engström, Å., Mora, L., Heurgué-Hamard, V., Buckingham, R.H., and Ehrenberg, M. (2000) A post-translational modification in the GGQ motif of RF2 from Escherichia coli stimulates termination of translation. EMBO J 19:6900-6907.
-
(2000)
EMBO J
, vol.19
, pp. 6900-6907
-
-
Dinçbas-Renqvist, V.1
Engström, Å.2
Mora, L.3
Heurgué-Hamard, V.4
Buckingham, R.H.5
Ehrenberg, M.6
-
5
-
-
0036171553
-
A new beginning of the end of translation
-
Ehrenberg, M., and Tenson, T. (2002) A new beginning of the end of translation. Nature Struct Biol 9:85-87.
-
(2002)
Nature Struct Biol
, vol.9
, pp. 85-87
-
-
Ehrenberg, M.1
Tenson, T.2
-
6
-
-
0000332840
-
Design and use of a fast and accurate in vitro translation system
-
Spedding, G. (ed.). Oxford and New York: IRL Press, Oxford University Press
-
Ehrenberg, M., Bilgin, N., and Kurland, C.G. (1990) Design and use of a fast and accurate in vitro translation system. In Ribosomes and Protein Synthesis. Spedding, G. (ed.). Oxford and New York: IRL Press, Oxford University Press, pp. 101-129.
-
(1990)
Ribosomes and Protein Synthesis
, pp. 101-129
-
-
Ehrenberg, M.1
Bilgin, N.2
Kurland, C.G.3
-
7
-
-
0030949960
-
Release factor RF3 in E. coli accelerates the dissociation of release factors RF1 and RF2 from the ribosome in a GTP dependent manner
-
Freistroffer, D.V., Pavlov, M.Y., MacDougall, J., Buckingham, R.H., and Ehrenberg, M. (1997) Release factor RF3 in E. coli accelerates the dissociation of release factors RF1 and RF2 from the ribosome in a GTP dependent manner. EMBO J 16:4126-4133.
-
(1997)
EMBO J
, vol.16
, pp. 4126-4133
-
-
Freistroffer, D.V.1
Pavlov, M.Y.2
MacDougall, J.3
Buckingham, R.H.4
Ehrenberg, M.5
-
8
-
-
0034090628
-
The accuracy of codon recognition by ribosome release factors
-
Freistroffer, D.V., Kwiatkowski, M., Buckingham, R.H., and Ehrenberg, M. (2000) The accuracy of codon recognition by ribosome release factors. Proc Natl Acad Sci USA 97: 2046-2051.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 2046-2051
-
-
Freistroffer, D.V.1
Kwiatkowski, M.2
Buckingham, R.H.3
Ehrenberg, M.4
-
9
-
-
0028581973
-
A highly conserved eukaryotic protein family possessing properties of polypeptide chain release factor
-
Frolova, L., Le Goff, X., Rasmussen, H.H., Cheperegin, S., Drugeon, G., Kress, M., et al. (1994) A highly conserved eukaryotic protein family possessing properties of polypeptide chain release factor. Nature 372:701-703.
-
(1994)
Nature
, vol.372
, pp. 701-703
-
-
Frolova, L.1
Le Goff, X.2
Rasmussen, H.H.3
Cheperegin, S.4
Drugeon, G.5
Kress, M.6
-
10
-
-
0032840382
-
Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis
-
Frolova, L.Y., Tsivkovskii, R.Y., Sivolobova, G.F., Oparina, N.Y., Serpinsky, O.I., Blinov, V.M., et al. (1999) Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis. RNA 5:1014-1020.
-
(1999)
RNA
, vol.5
, pp. 1014-1020
-
-
Frolova, L.Y.1
Tsivkovskii, R.Y.2
Sivolobova, G.F.3
Oparina, N.Y.4
Serpinsky, O.I.5
Blinov, V.M.6
-
11
-
-
0038351296
-
Ribosome release factor RF4 and termination factor RF3 are involved in dissociation of peptidyl-tRNA from the ribosome
-
Heurgué-Hamard, V., Karimi, R., Mora, L., MacDougall, J., Leboeuf, C., Grentzmann, G., et al. (1998) Ribosome release factor RF4 and termination factor RF3 are involved in dissociation of peptidyl-tRNA from the ribosome. EMBO J 17:808-816.
-
(1998)
EMBO J
, vol.17
, pp. 808-816
-
-
Heurgué-Hamard, V.1
Karimi, R.2
Mora, L.3
MacDougall, J.4
Leboeuf, C.5
Grentzmann, G.6
-
12
-
-
0038278345
-
Origins of minigene-dependent growth inhibition in bacterial cells
-
Heurgué-Hamard, V., Dincbas, V., Buckingham, R.H., and Ehrenberg, M. (2000) Origins of minigene-dependent growth inhibition in bacterial cells. EMBO J 19:2701-2709.
-
(2000)
EMBO J
, vol.19
, pp. 2701-2709
-
-
Heurgué-Hamard, V.1
Dincbas, V.2
Buckingham, R.H.3
Ehrenberg, M.4
-
13
-
-
0037084101
-
The hemK gene in Escherichia coli encodes the N(5)-glutamine methyltransferase that modifies peptide release factors
-
Heurgué-Hamard, V., Champ, S., Engstöm, Å., Ehrenberg, M., and Buckingham, R.H. (2002) The hemK gene in Escherichia coli encodes the N(5)-glutamine methyltransferase that modifies peptide release factors. EMBO J 21: 769-778.
-
(2002)
EMBO J
, vol.21
, pp. 769-778
-
-
Heurgué-Hamard, V.1
Champ, S.2
Engstöm, Å.3
Ehrenberg, M.4
Buckingham, R.H.5
-
14
-
-
0034628438
-
A tripepeptide anticodon deciphers stop codons in messenger RNA
-
Ito, K., Uno, M., and Nakamura, Y. (2000) A tripepeptide anticodon deciphers stop codons in messenger RNA. Nature 403:680-684.
-
(2000)
Nature
, vol.403
, pp. 680-684
-
-
Ito, K.1
Uno, M.2
Nakamura, Y.3
-
15
-
-
0027464670
-
Release factor-dependent false stops are infrequent in Escherichia coli
-
Jørgensen, F., Adamski, F.M., Tate, W.P., and Kurland, C.G. (1993) Release factor-dependent false stops are infrequent in Escherichia coli.J Mol Biol 230:41-50.
-
(1993)
J Mol Biol
, vol.230
, pp. 41-50
-
-
Jørgensen, F.1
Adamski, F.M.2
Tate, W.P.3
Kurland, C.G.4
-
16
-
-
0024110160
-
Conditionally lethal and recessive UGA-suppressor mutations in the prfB gene encoding peptide chain release factor 2 of Escherichia coli
-
Kawakami, K., Inada, T., and Nakamura, Y. (1988) Conditionally lethal and recessive UGA-suppressor mutations in the prfB gene encoding peptide chain release factor 2 of Escherichia coli. J Bacteriol 170:5378-5381.
-
(1988)
J Bacteriol
, vol.170
, pp. 5378-5381
-
-
Kawakami, K.1
Inada, T.2
Nakamura, Y.3
-
18
-
-
0034185463
-
Class-1 translation termination factors are structurally and functionally similar to suppressor tRNAs and belong to distinct structural/functional families (prokaryotes/mitochondria and eukaryotes/archaea)
-
Kisselev, L.L., Oparina, N.Y., and Frolova, L.Y. (2000) Class-1 translation termination factors are structurally and functionally similar to suppressor tRNAs and belong to distinct structural/functional families (prokaryotes/mitochondria and eukaryotes/archaea). Mol Biol (Moscow) 34: 427-442.
-
(2000)
Mol Biol (Moscow)
, vol.34
, pp. 427-442
-
-
Kisselev, L.L.1
Oparina, N.Y.2
Frolova, L.Y.3
-
19
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U.K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
20
-
-
0003842951
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Miller, J.H. (1992)A Short Course in Bacterial Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1992)
A Short Course in Bacterial Genetics
-
-
Miller, J.H.1
-
21
-
-
0037022398
-
HemK, a class of protein methyl transferase with similarity to DNA methyl transferases, methylates polypeptide chain release factors, and hemK knockout induces defects in translational termination
-
Nakahigashi, K., Kubo, N., Narita, S., Shimaoka, T., Goto, S., Oshima, T., et al. (2002) HemK, a class of protein methyl transferase with similarity to DNA methyl transferases, methylates polypeptide chain release factors, and hemK knockout induces defects in translational termination. Proc Natl Acad Sci USA 99:1473-1478.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 1473-1478
-
-
Nakahigashi, K.1
Kubo, N.2
Narita, S.3
Shimaoka, T.4
Goto, S.5
Oshima, T.6
-
22
-
-
0030592511
-
Emerging understanding of translation termination
-
Nakamura, Y., Ito, K., and Isaksson, L.A. (1996) Emerging understanding of translation termination. Cell 87: 147-150.
-
(1996)
Cell
, vol.87
, pp. 147-150
-
-
Nakamura, Y.1
Ito, K.2
Isaksson, L.A.3
-
23
-
-
0028812785
-
Phe, EF-Tu and a GTP analogue
-
Phe, EF-Tu and a GTP analogue. Science 270:1464-1472.
-
(1995)
Science
, vol.270
, pp. 1464-1472
-
-
Nissen, P.1
Kjeldgaard, M.2
Thirup, S.3
Polekhina, G.4
Reshetnikova, L.5
Clark, B.F.C.6
Nyborg, J.7
-
24
-
-
0015817922
-
Structural dynamics of bacterial ribosomes. II. Preparation and characterization of ribosomes and subunits active in the translation of natural messenger RNA
-
Noll, M., Hapke, B., and Noll, H. (1973) Structural dynamics of bacterial ribosomes. II. Preparation and characterization of ribosomes and subunits active in the translation of natural messenger RNA. J Mol Biol 80:519-529.
-
(1973)
J Mol Biol
, vol.80
, pp. 519-529
-
-
Noll, M.1
Hapke, B.2
Noll, H.3
-
25
-
-
0030928327
-
Fast recycling of E. coli ribosomes requires both ribosome recycling factor (RRF) and release factor RF3
-
Pavlov, M.Y., Freistroffer, D., MacDougall, J., Buckingham, R.H., and Ehrenberg, M. (1997a) Fast recycling of E. coli ribosomes requires both ribosome recycling factor (RRF) and release factor RF3. EMBO J 16:4134-4141.
-
(1997)
EMBO J
, vol.16
, pp. 4134-4141
-
-
Pavlov, M.Y.1
Freistroffer, D.2
MacDougall, J.3
Buckingham, R.H.4
Ehrenberg, M.5
-
26
-
-
0030779476
-
Release factor RF3 abolishes competition between release factor RF1 and ribosome recycling factor (RRF) for a ribosome binding site
-
Pavlov, M.Y., Freistroffer, D.V., Heurgué-Hamard, V., Buckingham, R.H., and Ehrenberg, M. (1997b) Release factor RF3 abolishes competition between release factor RF1 and ribosome recycling factor (RRF) for a ribosome binding site. J Mol Biol 273:389-401.
-
(1997)
J Mol Biol
, vol.273
, pp. 389-401
-
-
Pavlov, M.Y.1
Freistroffer, D.V.2
Heurgué-Hamard, V.3
Buckingham, R.H.4
Ehrenberg, M.5
-
27
-
-
0028941626
-
GTP consumption of elongation factor Tu during translation of heteropolymeric mRNAs
-
Rodnina, M.V., and Wintermeyer, W. (1995) GTP consumption of elongation factor Tu during translation of heteropolymeric mRNAs. Proc Natl Acad Sci USA 92:1945-1949.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 1945-1949
-
-
Rodnina, M.V.1
Wintermeyer, W.2
-
28
-
-
0021334017
-
A temperature-sensitive mutant of Escherichia coli that shows enhanced misreading of UAG/A and increased efficiency for some tRNA suppressors
-
Rydén, S.M., and Isaksson, L.A. (1984) A temperature-sensitive mutant of Escherichia coli that shows enhanced misreading of UAG/A and increased efficiency for some tRNA suppressors. Mol Gen Genet 193:38-45.
-
(1984)
Mol Gen Genet
, vol.193
, pp. 38-45
-
-
Rydén, S.M.1
Isaksson, L.A.2
-
29
-
-
0004136246
-
-
Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press
-
Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989)Molecu-lar Cloning: A Laboratory Manual. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
30
-
-
0017681196
-
DNA sequencing with chain-terminating inhibitors
-
Sanger, F., Nicklen, S., and Coulson, A.R. (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74:5463-5467.
-
(1977)
Proc Natl Acad Sci USA
, vol.74
, pp. 5463-5467
-
-
Sanger, F.1
Nicklen, S.2
Coulson, A.R.3
-
31
-
-
0034266465
-
Substitutions of the glutamine residue in the ubiquitous GGQ tripeptide in human eRF1 do not entirely abolish the release factor activity
-
Seit Nebi, A., Frolova, L.Y., Ivanova, N., Poltarous, A., and Kisselev, L.L. (2000) Substitutions of the glutamine residue in the ubiquitous GGQ tripeptide in human eRF1 do not entirely abolish the release factor activity. Mol Biol (Moscow) 34:899-900.
-
(2000)
Mol Biol (Moscow)
, vol.34
, pp. 899-900
-
-
Seit Nebi, A.1
Frolova, L.Y.2
Ivanova, N.3
Poltarous, A.4
Kisselev, L.L.5
-
32
-
-
0035476654
-
Class-1 translation termination factors: Invariant GGQ minidomain is essential for release activity and ribosome binding but not for stop codon recognition
-
Seit-Nebi, A., Frolova, L., Justesen, J., and Kisselev, L. (2001) Class-1 translation termination factors: Invariant GGQ minidomain is essential for release activity and ribosome binding but not for stop codon recognition. Nucleic Acids Res 29:3982-3987.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 3982-3987
-
-
Seit-Nebi, A.1
Frolova, L.2
Justesen, J.3
Kisselev, L.4
-
33
-
-
0034603210
-
The crystal structure of human eukaryotic release factor eRF1 - Mechanism of stop codon recognition and peptidyl-tRNA hydrolysis
-
Song, H., Mugnier, P., Das, A.K., Webb, H.M., Evans, D.R., Tuite, M.F., et al. (2000) The crystal structure of human eukaryotic release factor eRF1 - Mechanism of stop codon recognition and peptidyl-tRNA hydrolysis. Cell 100: 311-321.
-
(2000)
Cell
, vol.100
, pp. 311-321
-
-
Song, H.1
Mugnier, P.2
Das, A.K.3
Webb, H.M.4
Evans, D.R.5
Tuite, M.F.6
-
34
-
-
0023042283
-
Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes
-
Studier, F.W., and Moffatt, B.A. (1986) Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol 189:113-130.
-
(1986)
J Mol Biol
, vol.189
, pp. 113-130
-
-
Studier, F.W.1
Moffatt, B.A.2
-
35
-
-
0030437751
-
Functional specificity of amino acid at position 246 in the tRNA mimicry domain of bacterial release factor 2
-
Uno, M., Ito, K., and Nakamura, Y. (1996) Functional specificity of amino acid at position 246 in the tRNA mimicry domain of bacterial release factor 2. Biochimie 78: 935-944.
-
(1996)
Biochimie
, vol.78
, pp. 935-944
-
-
Uno, M.1
Ito, K.2
Nakamura, Y.3
-
36
-
-
0035697089
-
Bacterial polypeptide release factor RF2 is structurally distinct from eukaryotic eRF1
-
Vestergaard, B., Van Bich, L., Andersen, G.R., Nyborg, J., Buckingham, R.H., and Kjeldgaard, M. (2001) Bacterial polypeptide release factor RF2 is structurally distinct from eukaryotic eRF1. Mol Cell 8:1375-1382.
-
(2001)
Mol Cell
, vol.8
, pp. 1375-1382
-
-
Vestergaard, B.1
Van Bich, L.2
Andersen, G.R.3
Nyborg, J.4
Buckingham, R.H.5
Kjeldgaard, M.6
-
37
-
-
0021943518
-
Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
-
Yanisch-Perron, C., Vieira, J., and Messing, J. (1985) Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.
-
(1985)
Gene
, vol.33
, pp. 103-119
-
-
Yanisch-Perron, C.1
Vieira, J.2
Messing, J.3
-
38
-
-
0035812714
-
A post-termination ribosomal complex is the guanine nucleotide exchange factor for peptide release factor RF3
-
Zavialov, A.V., Buckingham, R.H., and Ehrenberg, M. (2001) A post-termination ribosomal complex is the guanine nucleotide exchange factor for peptide release factor RF3. Cell 107:115-124.
-
(2001)
Cell
, vol.107
, pp. 115-124
-
-
Zavialov, A.V.1
Buckingham, R.H.2
Ehrenberg, M.3
-
39
-
-
0036810254
-
Release of peptide promoted by the GGQ-motif of class 1 release factors regulates the GTPase activity of RF3
-
Zavialov, A.V., Mora, L., Buckingham, R.H., and Ehrenberg, M. (2002) Release of peptide promoted by the GGQ-motif of class 1 release factors regulates the GTPase activity of RF3. Mol Cell 10:789-798.
-
(2002)
Mol Cell
, vol.10
, pp. 789-798
-
-
Zavialov, A.V.1
Mora, L.2
Buckingham, R.H.3
Ehrenberg, M.4
|