-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TJ, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.J.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0002392489
-
Study on the myxobacterium Chondrococcus columnaris. I. Serological typing
-
Anacker RL, Ordal EJ (1959) Study on the myxobacterium Chondrococcus columnaris. I. Serological typing. J Bacteriol 78:25-32
-
(1959)
J Bacteriol
, vol.78
, pp. 25-32
-
-
Anacker, R.L.1
Ordal, E.J.2
-
5
-
-
0024398933
-
Deoxyribonucleic acid relatedness and phenotypic characterization of Flexibacter columnaris sp. nov., nom. rev., Flexibacter psychrophilus sp. nov., nom. rev., and Flexibacter maritimus Wakabayashi, Hikida, and Masumura 1986
-
Bernardet JF, Grimont PA (1989) Deoxyribonucleic acid relatedness and phenotypic characterization of Flexibacter columnaris sp. nov., nom. rev., Flexibacter psychrophilus sp. nov., nom. rev., and Flexibacter maritimus Wakabayashi, Hikida, and Masumura 1986. Int J Syst Bacteriol 39:346-354
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 346-354
-
-
Bernardet, J.F.1
Grimont, P.A.2
-
6
-
-
84986520790
-
Cytophaga johnsoniae: A putative skin pathogen of juvenile farmed barramundi, Lates calcarifer Bloch
-
Carson J, Schmidtke LM, Munday BL (1993) Cytophaga johnsoniae: a putative skin pathogen of juvenile farmed barramundi, Lates calcarifer Bloch. J Fish Dis 16:209-218
-
(1993)
J Fish Dis
, vol.16
, pp. 209-218
-
-
Carson, J.1
Schmidtke, L.M.2
Munday, B.L.3
-
7
-
-
0028047345
-
Identification of a granulocytotrophic Ehrlichia species as the etiologic agent of human disease
-
Chen SM, Dumler JS, Bakken JS, Walker DH (1994) Identification of a granulocytotrophic Ehrlichia species as the etiologic agent of human disease. J Clin Microbiol 32:589-595
-
(1994)
J Clin Microbiol
, vol.32
, pp. 589-595
-
-
Chen, S.M.1
Dumler, J.S.2
Bakken, J.S.3
Walker, D.H.4
-
8
-
-
0001408577
-
Virulence mechanisms in Cytophaga psychrophila and other cytophaga-like bacteria pathogenic for fish
-
Dalsgaard I (1993) Virulence mechanisms in Cytophaga psychrophila and other cytophaga-like bacteria pathogenic for fish. Annu Rev Fish Dis 3:127-144
-
(1993)
Annu Rev Fish Dis
, vol.3
, pp. 127-144
-
-
Dalsgaard, I.1
-
9
-
-
0000461280
-
Confidence limits of phylogenies: An approach using the bootstrap
-
Felsenstein J (1985) Confidence limits of phylogenies: an approach using the bootstrap. Evolution 39:783-791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
11
-
-
0033215537
-
The use of probiotics in aquaculture
-
Gatesoupe FJ (1999) The use of probiotics in aquaculture. Aquaculture 180:147-165
-
(1999)
Aquaculture
, vol.180
, pp. 147-165
-
-
Gatesoupe, F.J.1
-
12
-
-
0010334891
-
Biologie und vorkommen von aeroben wassermyxobakterien (Sporocytophaga cauliformis) im Bodensee
-
Gräf W, Stürzenhofecker P (1964) Biologie und Vorkommen von aeroben Wassermyxobakterien (Sporocytophaga cauliformis) im Bodensee. Arch Hyg 148:79-96
-
(1964)
Arch Hyg
, vol.148
, pp. 79-96
-
-
Gräf, W.1
Stürzenhofecker, P.2
-
13
-
-
0027200894
-
Inhibitory effect against pathogenic and spoilage bacteria of Pseudomonas strains isolated from spoiled and fresh fish
-
Gram L (1993) Inhibitory effect against pathogenic and spoilage bacteria of Pseudomonas strains isolated from spoiled and fresh fish. Appl Environ Microbiol 59:2197-2203
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 2197-2203
-
-
Gram, L.1
-
14
-
-
0032986390
-
Inhibition of Vibrio anguillarum by Pseudomonas fluorescens AH2, a possible probiotic treatment of fish
-
Gram L, Melchiorsen J, Spanggaard B, Huber I, Nielsen TF (1999) Inhibition of Vibrio anguillarum by Pseudomonas fluorescens AH2, a possible probiotic treatment of fish. Appl Environ Microbiol 65:969-973
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 969-973
-
-
Gram, L.1
Melchiorsen, J.2
Spanggaard, B.3
Huber, I.4
Nielsen, T.F.5
-
15
-
-
0034408817
-
Sequencing of gyrB and their application in the identification of Flavobacterium psychrophilum by PCR
-
Izumi S, Wakabayashi H (2000) Sequencing of gyrB and their application in the identification of Flavobacterium psychrophilum by PCR. Fish Pathol 35:93-94
-
(2000)
Fish Pathol
, vol.35
, pp. 93-94
-
-
Izumi, S.1
Wakabayashi, H.2
-
16
-
-
0002671874
-
Flexibacter columnaris infection in arctic charr Salvelinus alpinus (L.): First isolation in Finland
-
Koski P, Hirvelä-Koski V, Bernardet JF (1993) Flexibacter columnaris infection in arctic charr Salvelinus alpinus (L.): first isolation in Finland. Bull Eur Assoc Fish Pathol 13:66-69
-
(1993)
Bull Eur Assoc Fish Pathol
, vol.13
, pp. 66-69
-
-
Koski, P.1
Hirvelä-Koski, V.2
Bernardet, J.F.3
-
17
-
-
0010382565
-
Studies of artificial infection of the gliding bacteria in cultured fish
-
Kou SC, Chung HC, Kou HG (1981) Studies of artificial infection of the gliding bacteria in cultured fish. Fish Pathol 32:97-102
-
(1981)
Fish Pathol
, vol.32
, pp. 97-102
-
-
Kou, S.C.1
Chung, H.C.2
Kou, H.G.3
-
18
-
-
0001857117
-
16S/23S rRNA sequencing
-
Stackebrandt E, Goodfellow M (eds). Wiley & Sons, Chichester
-
Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic acid techniques in bacterial systematics. Wiley & Sons, Chichester, p 115-175
-
(1991)
Nucleic acid techniques in bacterial systematics
, pp. 115-175
-
-
Lane, D.J.1
-
19
-
-
0001093837
-
Microbial diversity in soil: The need for combined approach using molecular and cultivation techniques
-
van Elsas DJ, Trevors JT, Wellington EMH (eds). Marcel Dekker, New York
-
Liesack W, Janssen PH, Rainey FA, Ward-Rainey NL, Stackebrandt E (1997) Microbial diversity in soil: the need for combined approach using molecular and cultivation techniques. In: van Elsas DJ, Trevors JT, Wellington EMH (eds) Modern soil microbiology. Marcel Dekker, New York, p 375-439
-
(1997)
Modern soil microbiology
, pp. 375-439
-
-
Liesack, W.1
Janssen, P.H.2
Rainey, F.A.3
Ward-Rainey, N.L.4
Stackebrandt, E.5
-
20
-
-
0033028965
-
Diversity of chlorophenol degrading bacteria isolated from contaminated boreal groundwater
-
Männistö MK, Tiirola MA, Salkinoja-Salonen M, Kulomaa MS, Puhakka JA (1999) Diversity of chlorophenol degrading bacteria isolated from contaminated boreal groundwater. Arch Microbiol 171:189-197
-
(1999)
Arch Microbiol
, vol.171
, pp. 189-197
-
-
Männistö, M.K.1
Tiirola, M.A.2
Salkinoja-Salonen, M.3
Kulomaa, M.S.4
Puhakka, J.A.5
-
21
-
-
0031725011
-
Flavobacterium hibernum sp. nov., a lactose-utilizing bacterium from a freshwater Antarctic lake
-
McCammon SA, Innes BH, Bowman JP, Franzmann PD and 5 others (1998) Flavobacterium hibernum sp. nov., a lactose-utilizing bacterium from a freshwater Antarctic lake. Int J Syst Bacteriol 48:1405-1412
-
(1998)
Int J Syst Bacteriol
, vol.48
, pp. 1405-1412
-
-
McCammon, S.A.1
Innes, B.H.2
Bowman, J.P.3
Franzmann, P.D.4
-
22
-
-
0000599986
-
Profiling complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer G, De Waal EC, Uitterlinden AG (1993) Profiling complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 62:2156-2162
-
(1993)
Appl Environ Microbiol
, vol.62
, pp. 2156-2162
-
-
Muyzer, G.1
De Waal, E.C.2
Uitterlinden, A.G.3
-
24
-
-
0021971186
-
A new medium for the enumeration and subculture of bacteria from potable water
-
Reasoner DJ, Geldreich EE (1985) A new medium for the enumeration and subculture of bacteria from potable water. Appl Environ Microbiol 49:1-7
-
(1985)
Appl Environ Microbiol
, vol.49
, pp. 1-7
-
-
Reasoner, D.J.1
Geldreich, E.E.2
-
25
-
-
0020375189
-
Survival stages of a psychrotrophic Cytophaga johnsonae strain
-
Reichardt W, Morita RY (1982) Survival stages of a psychrotrophic Cytophaga johnsonae strain. Can J Microbiol 28:841-850
-
(1982)
Can J Microbiol
, vol.28
, pp. 841-850
-
-
Reichardt, W.1
Morita, R.Y.2
-
26
-
-
0030618312
-
Yellow pigmented filamentous bacteria connected with farmed salmonid fish mortality
-
Rintamäki-Kinnunen P, Bernardet JF, Bloigu A (1997) Yellow pigmented filamentous bacteria connected with farmed salmonid fish mortality. Aquaculture 149:1-14
-
(1997)
Aquaculture
, vol.149
, pp. 1-14
-
-
Rintamäki-Kinnunen, P.1
Bernardet, J.F.2
Bloigu, A.3
-
27
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
28
-
-
84986487117
-
Evidence for the competitive exclusion of Aeromonas salmonicida from fish with stress-inducible furunculosis by a fluorescent pseudomonad
-
Schmith P, Davey S (1993) Evidence for the competitive exclusion of Aeromonas salmonicida from fish with stress-inducible furunculosis by a fluorescent pseudomonad. J Fish Dis 16:521-524
-
(1993)
J Fish Dis
, vol.16
, pp. 521-524
-
-
Schmith, P.1
Davey, S.2
-
29
-
-
0031764376
-
A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis
-
Schwieger F, Tebbe CC (1998) A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis. Appl Environ Microbiol 64:4870-4876
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 4870-4876
-
-
Schwieger, F.1
Tebbe, C.C.2
-
30
-
-
0001604317
-
Flavobacterial diseases: Columnaris disease, cold-water disease and bacterial gill disease
-
Woo PTK (ed). CABI Publishing, New York
-
Shotts EB, Starliper CE (1999) Flavobacterial diseases: columnaris disease, cold-water disease and bacterial gill disease. In: Woo PTK (ed) Fish diseases and disorders. CABI Publishing, New York, p 559-576
-
(1999)
Fish diseases and disorders
, pp. 559-576
-
-
Shotts, E.B.1
Starliper, C.E.2
-
31
-
-
0028028182
-
Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
-
Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846-849
-
(1994)
Int J Syst Bacteriol
, vol.44
, pp. 846-849
-
-
Stackebrandt, E.1
Goebel, B.M.2
-
32
-
-
0031574072
-
The CLUSTAL X window interface: Flexible strategies for multiple alignment aided by quality analysis tool
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL X window interface: flexible strategies for multiple alignment aided by quality analysis tool. Nucleic Acids Res 25:4876-4882
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
33
-
-
21344437082
-
Identification of Flexibacter maritimus, Flavobacterium branchiophilum and Cytophaga columnaris by PCR targeted ribosomal DNA
-
Toyama T, Kita-Tsukamoto K, Wakabayashi H (1996) Identification of Flexibacter maritimus, Flavobacterium branchiophilum and Cytophaga columnaris by PCR targeted ribosomal DNA. Fish Pathol 31:25-31
-
(1996)
Fish Pathol
, vol.31
, pp. 25-31
-
-
Toyama, T.1
Kita-Tsukamoto, K.2
Wakabayashi, H.3
-
34
-
-
0032126955
-
Development of polymerase chain reaction assay for identification and detection of the fish pathogen Flavobacterium psychrophilum
-
Urdaci M, Chakroun C, Faure D, Bernardet JF (1998) Development of polymerase chain reaction assay for identification and detection of the fish pathogen Flavobacterium psychrophilum. Res Microbiol 149:519-530
-
(1998)
Res Microbiol
, vol.149
, pp. 519-530
-
-
Urdaci, M.1
Chakroun, C.2
Faure, D.3
Bernardet, J.F.4
-
35
-
-
0027086242
-
Occurrence and pathogenicity of Yersinia ruckeri at fish farms in northern and central Finland
-
Valtonen ET, Rintamäki P, Koskivaara M (1992) Occurrence and pathogenicity of Yersinia ruckeri at fish farms in northern and central Finland. J Fish Dis 15:163-171
-
(1992)
J Fish Dis
, vol.15
, pp. 163-171
-
-
Valtonen, E.T.1
Rintamäki, P.2
Koskivaara, M.3
-
36
-
-
0033409340
-
Genotypic diversity of strains of Flavobacterium columnare from diseased fishes
-
Wakabayashi T, Wakabayashi H (1999) Genotypic diversity of strains of Flavobacterium columnare from diseased fishes. Fish Pathol 34:65-71
-
(1999)
Fish Pathol
, vol.34
, pp. 65-71
-
-
Wakabayashi, T.1
Wakabayashi, H.2
-
37
-
-
0002261270
-
Isolation of Cytophaga psychrophila (Flexibacter psychrophilus) from wild and farmed rainbow trout (Oncorhynchus mykiss) in Finland
-
Wiklund T, Kaas K, Lönnström L, Dalsgaard I (1994) Isolation of Cytophaga psychrophila (Flexibacter psychrophilus) from wild and farmed rainbow trout (Oncorhynchus mykiss) in Finland. Bull Eur Assoc Fish Pathol 14:44-46
-
(1994)
Bull Eur Assoc Fish Pathol
, vol.14
, pp. 44-46
-
-
Wiklund, T.1
Kaas, K.2
Lönnström, L.3
Dalsgaard, I.4
-
38
-
-
0034065777
-
Detection of Flavobacterium psychrophilum from fish tissue and water samples by PCR amplification
-
Wiklund T, Madsen L, Bruun MS, Dalsgaard I (2000) Detection of Flavobacterium psychrophilum from fish tissue and water samples by PCR amplification. J Appl Microbiol 88:299-307
-
(2000)
J Appl Microbiol
, vol.88
, pp. 299-307
-
-
Wiklund, T.1
Madsen, L.2
Bruun, M.S.3
Dalsgaard, I.4
-
39
-
-
0025045135
-
Amplification of bacterial 16S ribosomal DNA with polymerase chain reaction
-
Wilson KH, Blitchington RB, Greene RC (1990) Amplification of bacterial 16S ribosomal DNA with polymerase chain reaction. J Clin Microbiol 28:1942-1946
-
(1990)
J Clin Microbiol
, vol.28
, pp. 1942-1946
-
-
Wilson, K.H.1
Blitchington, R.B.2
Greene, R.C.3
-
40
-
-
0023184331
-
Bacterial evolution
-
Woese CR (1987) Bacterial evolution. Microbiol Rev 51:221-271
-
(1987)
Microbiol Rev
, vol.51
, pp. 221-271
-
-
Woese, C.R.1
|