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Volumn 38, Issue 1, 2000, Pages 32-39

Direct amplification of rRNA genes in diagnosis of bacterial infections

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL INFECTION; BACTERIUM CULTURE; BACTERIUM IDENTIFICATION; DNA DETERMINATION; HUMAN; MAJOR CLINICAL STUDY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RNA ANALYSIS;

EID: 0033986735     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (176)

References (34)
  • 1
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R. I., W. Ludwig, and K.-H. Schleifer. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.-H.3
  • 3
    • 0029027263 scopus 로고
    • Intraspecific variation in small-subunit rRNA sequences in GenBank: Why single sequences may not adequately represent prokaryotic taxa
    • Clayton, R. A., G. Sutton, P. S. Hinkle, C. Bult, and C. Fields. 1995. Intraspecific variation in small-subunit rRNA sequences in GenBank: why single sequences may not adequately represent prokaryotic taxa. Int. J. Syst. Bacteriol. 45:595-599.
    • (1995) Int. J. Syst. Bacteriol. , vol.45 , pp. 595-599
    • Clayton, R.A.1    Sutton, G.2    Hinkle, P.S.3    Bult, C.4    Fields, C.5
  • 5
    • 0026585263 scopus 로고
    • How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity
    • Fox, G. E., J. D. Wisotzkey, and P. Jurtshuk. 1992. How close is close: 16S rRNA sequence identity may not be sufficient to guarantee species identity. Int. J. Syst. Bacteriol. 42:166-170.
    • (1992) Int. J. Syst. Bacteriol. , vol.42 , pp. 166-170
    • Fox, G.E.1    Wisotzkey, J.D.2    Jurtshuk, P.3
  • 6
    • 1842409545 scopus 로고    scopus 로고
    • Molecular diagnosis of bacterial endocarditis by broad-range PCR amplification and direct sequencing
    • Goldenberger, D., A. Künzli, P. Vogt, R. Zbinden, and M. Altwegg. 1997. Molecular diagnosis of bacterial endocarditis by broad-range PCR amplification and direct sequencing. J. Clin. Microbiol. 35:2733-2739.
    • (1997) J. Clin. Microbiol. , vol.35 , pp. 2733-2739
    • Goldenberger, D.1    Künzli, A.2    Vogt, P.3    Zbinden, R.4    Altwegg, M.5
  • 8
    • 0030914897 scopus 로고    scopus 로고
    • Broad-spectrum bacterial rDNA polymerase chain reaction assay for detecting amniotic fluid infection among women in premature labor
    • Hitti, J., D. E. Riley, M. A. Krohn, S. L. Hillier, K. J. Agnew, J. N. Krieger, and D. A. Eschenbach. 1997. Broad-spectrum bacterial rDNA polymerase chain reaction assay for detecting amniotic fluid infection among women in premature labor. Clin. Infect. Dis. 24:1228-1232.
    • (1997) Clin. Infect. Dis. , vol.24 , pp. 1228-1232
    • Hitti, J.1    Riley, D.E.2    Krohn, M.A.3    Hillier, S.L.4    Agnew, K.J.5    Krieger, J.N.6    Eschenbach, D.A.7
  • 9
    • 0031662188 scopus 로고    scopus 로고
    • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
    • Hugenholtz, P., B. M. Goebel, and N. R. Pace. 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J. Bacteriol. 180:4765-4774.
    • (1998) J. Bacteriol. , vol.180 , pp. 4765-4774
    • Hugenholtz, P.1    Goebel, B.M.2    Pace, N.R.3
  • 11
    • 0028820194 scopus 로고
    • Use of the polymerase chain reaction and DNA sequencing for detection of Bartonella quintana in the aortic valve of a patient with culture-negative infective endocarditis
    • Jalava, J., P. Kotilainen, S. Nikkari, M. Skurnik, E. Vänttinen, O.-P. Lehtonen, E. Eerola, and P. Toivanen. 1995. Use of the polymerase chain reaction and DNA sequencing for detection of Bartonella quintana in the aortic valve of a patient with culture-negative infective endocarditis. Clin. Infect. Dis. 21:891-896.
    • (1995) Clin. Infect. Dis. , vol.21 , pp. 891-896
    • Jalava, J.1    Kotilainen, P.2    Nikkari, S.3    Skurnik, M.4    Vänttinen, E.5    Lehtonen, O.-P.6    Eerola, E.7    Toivanen, P.8
  • 13
    • 0032747490 scopus 로고    scopus 로고
    • Phylogenetic analysis of Fusobacterium alocis and Fusobacterium sulci based on 16S rRNA gene sequences: Proposal of Filifactor alocis (Cato, Moore and Moore) comb. nov. and Eubacterium sulci (Cato, Moore and Moore) comb. nov
    • Jalava, J., and E. Eerola. 1999. Phylogenetic analysis of Fusobacterium alocis and Fusobacterium sulci based on 16S rRNA gene sequences: proposal of Filifactor alocis (Cato, Moore and Moore) comb. nov. and Eubacterium sulci (Cato, Moore and Moore) comb. nov. Int. J. Syst. Bacteriol 49:1375-1379.
    • (1999) Int. J. Syst. Bacteriol , vol.49 , pp. 1375-1379
    • Jalava, J.1    Eerola, E.2
  • 15
    • 0031724491 scopus 로고    scopus 로고
    • 16S ribosomal DNA typing for identification of pathogens in patients with bacterial keratitis
    • Knox, C. M., V. Cevellos, and D. Dean. 1998. 16S ribosomal DNA typing for identification of pathogens in patients with bacterial keratitis. J. Clin. Microbiol. 36:3492-3496.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 3492-3496
    • Knox, C.M.1    Cevellos, V.2    Dean, D.3
  • 17
    • 0008048504 scopus 로고
    • Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses
    • Lane, D. J., B. Pace, G. J. Olsen, D. A. Stahl, and M. L. Sogin. 1985. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc. Natl. Acad. Sci. USA 82:6955-6959.
    • (1985) Proc. Natl. Acad. Sci. USA , vol.82 , pp. 6955-6959
    • Lane, D.J.1    Pace, B.2    Olsen, G.J.3    Stahl, D.A.4    Sogin, M.L.5
  • 18
    • 0031850998 scopus 로고    scopus 로고
    • Detection of bacteraemia in patients with fever and neutropenia using 16S rRNA gene amplification by polymerase chain reaction
    • Ley, B. E., C. J. Linton, D. M. C. Bennett, H. Jalal, A. B. M. Foot, and M. R. Millar. 1998. Detection of bacteraemia in patients with fever and neutropenia using 16S rRNA gene amplification by polymerase chain reaction. Eur. J. Clin. Microbiol. Infect. Dis. 17:247-253.
    • (1998) Eur. J. Clin. Microbiol. Infect. Dis. , vol.17 , pp. 247-253
    • Ley, B.E.1    Linton, C.J.2    Bennett, D.M.C.3    Jalal, H.4    Foot, A.B.M.5    Millar, M.R.6
  • 20
    • 0026629643 scopus 로고
    • Phylogenetic interrelationships of members of the genera Aeromonas and Plesiomonas as determined by 16S ribosomal DNA sequencing: Lack of congruence with results of DNA-DNA hybridizations
    • Martinez-Murcia, A. J., S. Benlloch, and M. D. Collins. 1992. Phylogenetic interrelationships of members of the genera Aeromonas and Plesiomonas as determined by 16S ribosomal DNA sequencing: lack of congruence with results of DNA-DNA hybridizations. Int. J. Syst. Bacteriol. 42:412-421.
    • (1992) Int. J. Syst. Bacteriol. , vol.42 , pp. 412-421
    • Martinez-Murcia, A.J.1    Benlloch, S.2    Collins, M.D.3
  • 21
    • 0023461268 scopus 로고
    • Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction
    • Mullis, K. B., and F. A. Falcoona. 1987. Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol. 155:335-350.
    • (1987) Methods Enzymol. , vol.155 , pp. 335-350
    • Mullis, K.B.1    Falcoona, F.A.2
  • 22
    • 0026682855 scopus 로고
    • Yersinia-triggered reactive arthritis. Use of polymerase chain reaction and immunocytochemical staining in the detection of bacterial components from synovial specimens
    • Nikkari, S., R. Merilahti-Palo, R. Saario, K.-O. Söderström, K. Granfors, M. Skurnik, and P. Toivanen. 1992. Yersinia-triggered reactive arthritis. Use of polymerase chain reaction and immunocytochemical staining in the detection of bacterial components from synovial specimens. Arthritis Rheum. 35:682-687.
    • (1992) Arthritis Rheum. , vol.35 , pp. 682-687
    • Nikkari, S.1    Merilahti-Palo, R.2    Saario, R.3    Söderström, K.-O.4    Granfors, K.5    Skurnik, M.6    Toivanen, P.7
  • 23
    • 0032927784 scopus 로고    scopus 로고
    • Molecular approaches for identification of infectious agents in Wegener's granulomatosis and other vasculitides
    • Nikkari, S., and D. A. Relman. 1999. Molecular approaches for identification of infectious agents in Wegener's granulomatosis and other vasculitides. Curr. Opin. Rheumatol. 11:11-16.
    • (1999) Curr. Opin. Rheumatol. , vol.11 , pp. 11-16
    • Nikkari, S.1    Relman, D.A.2
  • 24
    • 0028307302 scopus 로고
    • HLA-B27 typing by a group-specific PCR amplification
    • Olerup, O. 1994. HLA-B27 typing by a group-specific PCR amplification. Tissue Antigens 43:253-256.
    • (1994) Tissue Antigens , vol.43 , pp. 253-256
    • Olerup, O.1
  • 25
    • 0023989064 scopus 로고
    • Improved tools for biological sequence comparison
    • Pearson, W. R., and D. J. Lipman. 1988. Improved tools for biological sequence comparison. Proc. Natl. Acad. Sci. USA 85:2444-2448.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 26
    • 0025258967 scopus 로고
    • The agent of bacillary angiomatosis - An approach to the identification of uncultured pathogens
    • Relman, D. A., J. S. Loutit, T. M. Schmidt, S. Falkow, and L. S. Tomkins. 1990. The agent of bacillary angiomatosis - an approach to the identification of uncultured pathogens. N. Engl. J. Med. 323:1573-1580.
    • (1990) N. Engl. J. Med. , vol.323 , pp. 1573-1580
    • Relman, D.A.1    Loutit, J.S.2    Schmidt, T.M.3    Falkow, S.4    Tomkins, L.S.5
  • 27
    • 0026632826 scopus 로고
    • Identification of the uncultured bacillus of Whipple's disease
    • Relman, D. A., T. M. Schmidt, R. P. MacDermott, and S. Falkow. 1992. Identification of the uncultured bacillus of Whipple's disease. N. Engl. J. Med. 327:293-301.
    • (1992) N. Engl. J. Med. , vol.327 , pp. 293-301
    • Relman, D.A.1    Schmidt, T.M.2    MacDermott, R.P.3    Falkow, S.4
  • 28
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E., and B. M. Goebel. 1994. Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44:846-849.
    • (1994) Int. J. Syst. Bacteriol. , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 29
    • 0000756779 scopus 로고
    • Methods of microbial identification, tracking and monitoring of function
    • Stahl, D. A., and M. D. Kane. 1992. Methods of microbial identification, tracking and monitoring of function. Curr. Opin. Biotechnol. 3:244-252.
    • (1992) Curr. Opin. Biotechnol. , vol.3 , pp. 244-252
    • Stahl, D.A.1    Kane, M.D.2
  • 31
    • 0031904685 scopus 로고    scopus 로고
    • Specific ribosomal DNA sequences from diverse environmental settings correlate with experimental contaminants
    • Tanner, M. A., B. M. Goebel, M. A. Dojka, and N. R. Pace. 1998 Specific ribosomal DNA sequences from diverse environmental settings correlate with experimental contaminants. Appl. Environ. Microbiol. 64:3110-3113.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3110-3113
    • Tanner, M.A.1    Goebel, B.M.2    Dojka, M.A.3    Pace, N.R.4
  • 32
  • 33
    • 0025738042 scopus 로고
    • Phylogeny of the Whipple's-disease-associated bacterium
    • Wilson, K. H., R. Blitchington, R. Frothingam, and J. A. P. Wilson. 1991. Phylogeny of the Whipple's-disease-associated bacterium. Lancet 338:474-475.
    • (1991) Lancet , vol.338 , pp. 474-475
    • Wilson, K.H.1    Blitchington, R.2    Frothingam, R.3    Wilson, J.A.P.4
  • 34
    • 0023184331 scopus 로고
    • Bacterial evolution
    • Woese, C. R. 1987. Bacterial evolution. Microbiol. Rev. 51:221-271.
    • (1987) Microbiol. Rev. , vol.51 , pp. 221-271
    • Woese, C.R.1


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